Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi3g1v0376900 |
Transcript ID | LotjaGi3g1v0376900.5 |
Related isoforms 5 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Homeobox leucine zipper protein; TAIR: AT4G00730.1 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein; Swiss-Prot: sp|Q0WV12|ANL2_ARATH Homeobox-leucine zipper protein ANTHOCYANINLESS 2; TrEMBL-Plants: tr|V7ANR5|V7ANR5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0376900 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:76955183..76959879) extracted from Lotus japonicus Gifu genome v1.2.
AAGAGAAAAGGTGGCTTCTTTGATGAGTTTTGGAGGTTTTCTTGACAGCAACAACTCCGGTGGTGGCGGTGGCGGTGGTA GAAACATAGCAGCTGATGTTCCTTACAGCAACGGCAACACCACCAACGATAGAATGGCCTTTGGTGCAATCTCTCAGCCA CGCCTGGTGACTACTACTCCCTCTTTGGCAAAACCCATGTTCACCTCTCCTGGATTGTCTCTGGCACTTGTGAGAGATCT TGTTAGCTTTCTTAGTTCCCCTTTGCATTTCTTGCTGGTAGTTACCTTGTTCTTGTTATGTTTCCTGATTTGTTTTCCTT TTTGTTTTCTGTGTTTGGAAAATAAATTCAAAAGCAGCAAAGCAATATAGATGGACAAGAAGATGTGAATAGAATGTGTG AGCCAAATGGTTTGAAGAGGAGCAGGGAAGAAGAGCAAAGCAGATCTGGCAGTGATAACATGGATGGTGGTGCTTCCTGT GATGAACAAGATGCTGCCGACAATCCTCCTAATAAGAAGAAGCGTTATCACCGACACACTCCTCAGCAGATTCAAGAGCT TGAAGCGTATGCTATTTTGGTCCACCGTGTGTTTGTTTTTAAGGTTTATTTACTTAGATTCTGAATGATGATTGTTTTTT TTTTTTTGGTAAATGGGTTTTAGGTTGTTCAAGGAGTGTCCTCACCCAGATGAGAAGCAAAGATTAGAACTCAGCAGAAG GCTTTGTTTGGAAACTAGGCAGGTCAAGTTCTGGTTCCAAAATCGGAGGACCCAAATGAAGGTACATTTTCTCACATGGC TTCTTTTAATGGACCATCATGAAACTTTTATTACTTTTGTTAATAGATTTATTTGGTTGTACAATTGTACCAGACTCAAT TGGAACGCCATGAGAACACGCTGCTTAGGCAAGAGAATGATAAGCTGAGAGGTGAGAACATGTCTATTAGGGACGCTATG AGGAACCCAATTTGTTCAAACTGTGGGGGTCCAGCTATGATTGGTGAGATTTCAATTGAGGAGCAGCATCTTCGGATCGA GAATGCCCGATTGAAGGATGAGCTAGACCGGGTTTGCGCGCTCGCGGGGAAGTTCTTGGGTCGCCCCATTTCGTCATTGC CGAACTCAAGTTTGGAGCTTGGTGTTGGGGGAAACAATGGTTTTGGTGGGATGAACACAATGCCTGATTTTGGGATGGCT AACTCTTTAGCCATGGTGTCTCCTTCAATAAGACCATCACCGACTGGGGTTACTTCTGGATTTGTTGATAGATCAATTGA GAGGTCTATGATTGTTGAGCTTGCTTTGGCTGCTATGGATGAATTGATGAAGATGGCGCAGACCGGTGAGCCTCTCTGGA TGAGGAATGTTGAAGTGGGGAGGGAAATTTTGAACCATGAGGAGTACATGAGGACATTCACTCCTTGCATTGGGATTAGG CCTAATGGTTTTGTCTCTGAGGCTTCTAGGGAGACTGGAATGGTCATCATAAACAGCTTAGCCCTTGTTGAAACTCTCAT GGATGCAGTAAGTTATATTAAACTAGTAATTGGGTAAAATTTGTGTTTGAATTGTTTTCATTCTATGTGGAAATGTGTAC AACATCAAATTGATTTGCTTTTTCGCCTTCGCAGAATCGATGGGCAGAGATGTTTCCTTGCATGATTGCCAGAACCGCCA CCAACGAAGTTGTATCCAGTGGGATAAATGGAACCAGAAATGGTGCACTTCAACTAGTAAGTTCAATTTGTTGTATGGAA CACTGTTATTAATTTTAGTAAAGCTTTTCTTTAATTTGTTAACCCATCAATTATGTGCACAGATGCATGGTGAACTTCAT GTTCTTTCACCTTTGGTTCCGGTTCGCGAGGTCAATTTCCTCCGATTTTGCAAGCAGCACAGAGAAGGTGTGTGGGCTGT GGTGGATCTGTCCATAGATACCATCCGAGAAGGTTCGGGCGTGCCTAGTTTTGGTAACTGCAGGAGGCTTCCTTCTGGTT GTGTGGTGCAAGATATGCCTAATGGTTATTCCAAGGTAAAATTTCCAAATGTTCTTTCTGCTTGTTATAACAATTGGATC AGCTTATTTTTGCTTGGAAGCTACACAATTGTTTTTGTTTTAGAATCAATTGTAGGAGAGTTTCTAAACATAATTTAGAG GACAGTAAAAATGATTTACAGTCATCCACGCTTTGTGTCCTAAACATTTTATAGACACACACAAGGGTTGTACTAATCAC CATGCAACTATTTTATGAACCTTACTAAAGTACAGTGTTTAATGGAGCCTGTTTAATCTCTCTTGATTTCATGTTTTTAT TTTTAAAAAATTATTATAATTACCTTCAAGTAACTGGATCATGAGAGCTGGTAGAATATTCAAGTGAAGCAAACACCAGG CCAAGGAATCACGGGGCTTTTGCTTTTCCAAGCCATTAAAAATCTCCTAGTTCCAAGCAACTTAACTAGCCTAGTGACTA CTCACTCTAGAACTACTCTGTCAGTGATAATTCCCATATTCCTCTTTTCAATAAATTTGGACAATTGCATTGCAACTGAG CAGTGTGCTTCTTCTTGTCTCAATCAAAGCATTAATATAATTCTACACTGAGCTTCTCAACAATTCATCTAAAATCCAAC AAACTAGTATATTTGAATAATACCCCTCATCATGTGGTCCAGGTCCAGAAAATTTTCATTAATTTAATCATAGAAGCCTC TGTCACTTGATATTCTGCACCACATTAACTAGATAGTAGATATCCTTTCCTAAACAATTTATCTTGTAATCTTCCAAGTA CTTTTTGATTCTATAAACAACATATATGATGTTTCTATTCCAATCAGACAATTCCCCAGAAGCATTATTTAATTCCAATA TAACAATAATAATAGCATAGTTTTGAAATCCAAACCCTTGGGGTTGAAAATCAAAGAGTGGCTATTTTGTCTGTTTCTAG TGAGTACTGTATTAGTTTTGAGTTTAGTTACATTGGCAAATCTCGATGCTCATAGTGTCACTACCCCCTTACTTGACTTT TTATGTTGTACCAATATTTTATCTACTTGGTAGAGATTCATTAGATACCTTTGTCTCAACCCCTTGTCCAATAATGGTAT TTTAATCAAATTATATATTAATTAATAAACTCTTAAACTTTGTGTGCAATCTAACGACCCTTTAATTTTGCGTTTCATTT AATTTACAGGTGACATGGGTGGAGCATGCAGAATACGACGAAAGTCAAGTCCACCAGCTGTACAGACCCTTATTGAGCTC CGGCATGGGGTTTGGAGCACAACGCTGGATCGCCACCTTACAACGCCAGTGCGAGTGCCTCGCCATCCTCATGTCCTCTG CACCACCCTCCATCAGAGACCACTCCGGTAACATTATCTTATATTTTTAATTTAATGAAGGTTGGATATAATAATGAAAT TATTTAAGAATTTTTTTCTAAAGTTATTAATTGTGGTGGTGGTGGATCCGGAACAGCACCGATTACAGCAGGGGGAAAGC GCAGCATGCTGAAGCTGGCGCAGCGCATGACCAACAACTTCTGCGCCGGGGTGTGCGCCTCCACCGTGCACAAATGGAAC AAGCTGAATCCGGGCAATGTGGAGGAAAACGTGAGGGTGATGACACGGCAGAGCATCGACGATCCCGGTGAGCCACCGGG GATCGTGCTCAGCGCTGCCACGTCTGTGTGGCTCCCTGTCTCCCCTCACCGGCTCTTCAATTTCCTCCGTGACGAGAGGC TCCGGAGTGAGTGGGACATACTCTCCAACGGTGGTCCCATGCAGGAGATGGCCCACATCGCTAAGGGTCAAGACCATGGC AACTGCGTCTCTCTTCTACGAGCTAGTGTAAGATTGTTTTCTTTTATCAAATGACCATAATGCCCTTTTCCATGTCAATG AGCTTTCTTTGTCGTTTATTGTTTGGATTGGAGAGGTTGAAAATATGAAAAGGACAAAGGAGGAAATTTTTTAGAGGCGC TAATTTTGATGAAGCGGTAAAATAAGAAGATTTTATAACAAGTCAAAATAAAAGGACATGGTACTTTCTGACATCATTGT CTTTTTATTTATTTTTATTTTTTGAAAATTAAAAATATAATATAGGAAAAAGTTGAATCAGGGTTTGACTAAAACGAAAT GACAGGGTTTCTTACATCATTATTTTATTTCATTTTTATTTTTGGAAATCAATATAACTTCATGAAAATGACAAGATGCT ATTACTATATTATACTGAAATAAAAATATTTTTGTATTAATTGATTTATAATTTATTTTTATTTTGCAGGCAATGAATTC GAACCAGAGTAGCATGTTGATACTACAGGAGACATGCACAGACGCGTCGGGGTCGCTTGTGGTGTACGCGCCGGTGGATA CTCCGGCCATGCACGTGGTCATGAATGGTGGCGATTCTGCTTATGTGGCGTTGTTGCCGTCTGGTTTTGCGGTTGCTCCT GATGGTGATGAGACGCGTGGGCTGGAGAATGGTGGTGGTGCTAATGGCGGTGATGATGGTGAGGCGCGTGCGGGTGGGTC CCTTCTGACGGTGGCGTTTCAGATACTCGTGAATAGTCTCCCTACGGCCAAGCTGACGGTGGAGTCAGTGGAGACCGTGA ACAATCTCATCTCCTGCACGGTTCAGAAGATCAGAGCCGCGCTTTCACTGTGAAAAT
CDS sequence (LotjaGi3g1v0376900.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTTTTGGAGGTTTTCTTGACAGCAACAACTCCGGTGGTGGCGGTGGCGGTGGTAGAAACATAGCAGCTGATGTTCC TTACAGCAACGGCAACACCACCAACGATAGAATGGCCTTTGGTGCAATCTCTCAGCCACGCCTGGTGACTACTACTCCCT CTTTGGCAAAACCCATGTTCACCTCTCCTGGATTGTCTCTGGCACTTGTGAGAGATCTTGATGGACAAGAAGATGTGAAT AGAATGTGTGAGCCAAATGGTTTGAAGAGGAGCAGGGAAGAAGAGCAAAGCAGATCTGGCAGTGATAACATGGATGGTGG TGCTTCCTGTGATGAACAAGATGCTGCCGACAATCCTCCTAATAAGAAGAAGCGTTATCACCGACACACTCCTCAGCAGA TTCAAGAGCTTGAAGCGTTGTTCAAGGAGTGTCCTCACCCAGATGAGAAGCAAAGATTAGAACTCAGCAGAAGGCTTTGT TTGGAAACTAGGCAGGTCAAGTTCTGGTTCCAAAATCGGAGGACCCAAATGAAGACTCAATTGGAACGCCATGAGAACAC GCTGCTTAGGCAAGAGAATGATAAGCTGAGAGGTGAGAACATGTCTATTAGGGACGCTATGAGGAACCCAATTTGTTCAA ACTGTGGGGGTCCAGCTATGATTGGTGAGATTTCAATTGAGGAGCAGCATCTTCGGATCGAGAATGCCCGATTGAAGGAT GAGCTAGACCGGGTTTGCGCGCTCGCGGGGAAGTTCTTGGGTCGCCCCATTTCGTCATTGCCGAACTCAAGTTTGGAGCT TGGTGTTGGGGGAAACAATGGTTTTGGTGGGATGAACACAATGCCTGATTTTGGGATGGCTAACTCTTTAGCCATGGTGT CTCCTTCAATAAGACCATCACCGACTGGGGTTACTTCTGGATTTGTTGATAGATCAATTGAGAGGTCTATGATTGTTGAG CTTGCTTTGGCTGCTATGGATGAATTGATGAAGATGGCGCAGACCGGTGAGCCTCTCTGGATGAGGAATGTTGAAGTGGG GAGGGAAATTTTGAACCATGAGGAGTACATGAGGACATTCACTCCTTGCATTGGGATTAGGCCTAATGGTTTTGTCTCTG AGGCTTCTAGGGAGACTGGAATGGTCATCATAAACAGCTTAGCCCTTGTTGAAACTCTCATGGATGCAAATCGATGGGCA GAGATGTTTCCTTGCATGATTGCCAGAACCGCCACCAACGAAGTTGTATCCAGTGGGATAAATGGAACCAGAAATGGTGC ACTTCAACTAATGCATGGTGAACTTCATGTTCTTTCACCTTTGGTTCCGGTTCGCGAGGTCAATTTCCTCCGATTTTGCA AGCAGCACAGAGAAGGTGTGTGGGCTGTGGTGGATCTGTCCATAGATACCATCCGAGAAGGTTCGGGCGTGCCTAGTTTT GGTAACTGCAGGAGGCTTCCTTCTGGTTGTGTGGTGCAAGATATGCCTAATGGTTATTCCAAGGTGACATGGGTGGAGCA TGCAGAATACGACGAAAGTCAAGTCCACCAGCTGTACAGACCCTTATTGAGCTCCGGCATGGGGTTTGGAGCACAACGCT GGATCGCCACCTTACAACGCCAGTGCGAGTGCCTCGCCATCCTCATGTCCTCTGCACCACCCTCCATCAGAGACCACTCC GCACCGATTACAGCAGGGGGAAAGCGCAGCATGCTGAAGCTGGCGCAGCGCATGACCAACAACTTCTGCGCCGGGGTGTG CGCCTCCACCGTGCACAAATGGAACAAGCTGAATCCGGGCAATGTGGAGGAAAACGTGAGGGTGATGACACGGCAGAGCA TCGACGATCCCGGTGAGCCACCGGGGATCGTGCTCAGCGCTGCCACGTCTGTGTGGCTCCCTGTCTCCCCTCACCGGCTC TTCAATTTCCTCCGTGACGAGAGGCTCCGGAGTGAGTGGGACATACTCTCCAACGGTGGTCCCATGCAGGAGATGGCCCA CATCGCTAAGGGTCAAGACCATGGCAACTGCGTCTCTCTTCTACGAGCTAGTGCAATGAATTCGAACCAGAGTAGCATGT TGATACTACAGGAGACATGCACAGACGCGTCGGGGTCGCTTGTGGTGTACGCGCCGGTGGATACTCCGGCCATGCACGTG GTCATGAATGGTGGCGATTCTGCTTATGTGGCGTTGTTGCCGTCTGGTTTTGCGGTTGCTCCTGATGGTGATGAGACGCG TGGGCTGGAGAATGGTGGTGGTGCTAATGGCGGTGATGATGGTGAGGCGCGTGCGGGTGGGTCCCTTCTGACGGTGGCGT TTCAGATACTCGTGAATAGTCTCCCTACGGCCAAGCTGACGGTGGAGTCAGTGGAGACCGTGAACAATCTCATCTCCTGC ACGGTTCAGAAGATCAGAGCCGCGCTTTCACTGTGA
Protein sequence (LotjaGi3g1v0376900.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSFGGFLDSNNSGGGGGGGRNIAADVPYSNGNTTNDRMAFGAISQPRLVTTTPSLAKPMFTSPGLSLALVRDLDGQEDVN RMCEPNGLKRSREEEQSRSGSDNMDGGASCDEQDAADNPPNKKKRYHRHTPQQIQELEALFKECPHPDEKQRLELSRRLC LETRQVKFWFQNRRTQMKTQLERHENTLLRQENDKLRGENMSIRDAMRNPICSNCGGPAMIGEISIEEQHLRIENARLKD ELDRVCALAGKFLGRPISSLPNSSLELGVGGNNGFGGMNTMPDFGMANSLAMVSPSIRPSPTGVTSGFVDRSIERSMIVE LALAAMDELMKMAQTGEPLWMRNVEVGREILNHEEYMRTFTPCIGIRPNGFVSEASRETGMVIINSLALVETLMDANRWA EMFPCMIARTATNEVVSSGINGTRNGALQLMHGELHVLSPLVPVREVNFLRFCKQHREGVWAVVDLSIDTIREGSGVPSF GNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYRPLLSSGMGFGAQRWIATLQRQCECLAILMSSAPPSIRDHS APITAGGKRSMLKLAQRMTNNFCAGVCASTVHKWNKLNPGNVEENVRVMTRQSIDDPGEPPGIVLSAATSVWLPVSPHRL FNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAMNSNQSSMLILQETCTDASGSLVVYAPVDTPAMHV VMNGGDSAYVALLPSGFAVAPDGDETRGLENGGGANGGDDGEARAGGSLLTVAFQILVNSLPTAKLTVESVETVNNLISC TVQKIRAALSL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
MobiDBLite | 1 | 33 | 33 | - | – | |
PANTHER | 63 | 810 | 748 | 0.0 | ||
PANTHER | 63 | 810 | 748 | 0.0 | – | |
MobiDBLite | 78 | 130 | 53 | - | – | |
MobiDBLite | 78 | 100 | 23 | - | – | |
Gene3D | 96 | 179 | 84 | 7.4E-20 | – | |
SUPERFAMILY | 103 | 180 | 78 | 5.13E-21 | ||
ProSiteProfiles | 120 | 180 | 61 | 17.362 | ||
SMART | 121 | 184 | 64 | 4.7E-17 | ||
Pfam | 123 | 178 | 56 | 1.6E-18 | ||
CDD | 123 | 180 | 58 | 5.39396E-19 | ||
ProSitePatterns | 155 | 178 | 24 | - | ||
Coils | 174 | 194 | 21 | - | – | |
ProSiteProfiles | 311 | 547 | 237 | 42.319 | ||
SUPERFAMILY | 313 | 544 | 232 | 2.59E-31 | – | |
CDD | 315 | 543 | 229 | 2.4872E-124 | – | |
SMART | 320 | 544 | 225 | 1.7E-45 | ||
Pfam | 320 | 544 | 225 | 2.0E-54 | ||
SUPERFAMILY | 574 | 805 | 232 | 7.51E-23 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
Molecular function | Lipid binding | Interacting selectively and non-covalently with a lipid. | ||
Molecular function | Sequence-specific DNA binding | Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding. |
Expression pattern of LotjaGi3g1v0376900.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…