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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0395300 |
| Transcript ID | LotjaGi3g1v0395300.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Dynamin; TAIR: AT3G61760.1 DYNAMIN-like 1B; Swiss-Prot: sp|Q84XF3|DRP1B_ARATH Dynamin-related protein 1B; TrEMBL-Plants: tr|A0A0L9T6L3|A0A0L9T6L3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0395300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:79524419..79531313) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAGAATCTGATACAATTGGTGAACAAAATCCAAAGAGCATGCACCGCGCTCGGCGATCACGGCGAGGAGAGTGCCTT GCCCACTCTCTGGGATGCCCTTCCCTCCATCGCCGTCGTCGGAGGACAGGTCCGTCCAATCGATTCCCTTTTACCATCTC ATTTATCATCATTATCATTGTTAATTACAACTAATCAATGCAGTTAAACCTGATTTTTGTTTAATTTTTCCATTTCTCGT AAATTTGGAGTTCGTTGATTTAGATTTGTGCGTTACTTTTGATTTTCCAGAGTTCAGGGAAATCTTCAGTGTTGGAGAGC ATTGTTGGGAAGGATTTTTTGCCTCGTGGATCTGGAATTGTTACGCGGAGGCCTCTTGTTTTGCAGCTTCATAAGATTGA TGATTCCAGAGAGTATGCTGAATTCATGCACCTTCCAAGGAAGAGATTTACTGATTTTGGTATTCTCCTAAACCTACATT CAGTACTGCTATTCACTTTTCACACCCTTATGGTTGTTTTACTTGCATTTAATTATTGATTACACTAAGCATCAGTGCGG TAGACTGGTAGCAACTAGCACTAGCAAGTACATTTAGTATCTCTTTGCTGGAGTTTTCCCCTAATAAATGTTAAAGTGTT CTATGTTGTCAATCCTAAATCTCAGCGCGTAGTGGCCGGGAAAATGAATTTGTCTATATTTTGTATAATTAATCCCATCT ATATATATATATGAAGAAAGGAAGGATCCCAACAAAGAATCGATCTTTCTTTTAGTTGTTGAATCTCTCTTTGATTGATC AATGTGTCATATTTCGAATCCTCATTCCTAATGGAATCGAAATGCTAAATCAATAATAAATTGTACTTGAAATTCATAAC ATATTCATACTTTCATAGCAGTAAACTAGGAATATAAGTCATACTTCTTGAGAGAGCAAGGGCGAAGGGCGAAGAGAGCA GGGGAAGTGAGAAGGGAAATGGGATGGGATGGGACTACAGGATCCCACAGGTGCTTGCCCAGATTGACAACATAGGAAGT GTTACCTAGTTTTTTTAAGGATTTTAATTTATATGCAGTGACTGTGTAGTAAAGAGTTTTAGACATACATTCAATCAAAT CTCTCCATTTTTCATTTTAAATATTTTAAAATTCAAATTTAATTATGACATGGCAAATTGATGAATTCTAATTGAATGAC TGGGTAAGTCTTTGTCAGTCCATGGTAACTAAACTCGTTTTTATAAAAGAAATTAAAATATTGATGATGTGGTTTCACTG GTAGTTACTAGTTTTGCTTGTTATGTAGCTGCTGTAAGACAAGAGATAGCTGATGAGACTGATAGAGAAACAGGTCGCTC CAAGGGTATTTCATCAGTTCCCATCCATCTCAGTATCTACTCTCCTAATGGTGAGATATATATAAATATAGCAATCTAAT TTTATCTTATTGGTAATTAAAATTGTGAGACTAGGAACTTAAAACATGCATAATTTGATTTTGTTTTTTAAGTTTGAATA TATCAGTTGATTATATGTTACTATAACAATCATATTGACTATTGCTGGAACAGTTTTACCAATCACCACTTGCTTGCAAA ATACATAGTATTACAATGACAATTATGTTCTACTCTAGCACATCAATGACATCATGAATGCCCATCAGTCTAATCTTTGT TCTTTTTTGGTCCAAAGTATTGAACACTTTGGTTTTTAAATATTAATGAGTCCTAGTACCAATTTTTTTAAACTAGTATC GAACAACAAGTATTATCTTATAACTGCACCATCTACATGAGTTATTTTTTAAAAAGGCTCTAATCTAAGTATAACTTATT TGTGCTTGTTACTTTTTAAATTGAATGTTCTTGTTTAAGTATCCATTTCATCCATTGAATTTGTTGACTTGGCAGTTGTC AATCTGACACTGGTTGATCTTCCGGGACTTACAAAAGTTGCTGTTGGTGAGGTTTTATTCTAAGATTGGCTTTTTGCTCA GTTAAGTTAAATTTACAAGCACTATTGCATATAGCTATGGAAATTTATGGTATAATGTTGTCTGTTATTGCAGAGGGTCA ACCAGATAGCATTGTGCAAGACATTGAAAATATGGTTCGGGCCTTTATCGAAAAGGTGATTATTCTTATATACAATGAAA TAATCAAGAAAGATGGTGATGCATATGGGAACATTTATTTGTTGTGAGGTGATGAAAATTTAATGAAATGCTTAATGCTT AATGCATATGCTTAATGATTGCCCTGATGATATCCCTCTCTTTCAAATTGCCAATGAGATCAAGGCGCGAAAAGCTTCTC TGCGCCGTTGAGGGTGAGATTTGGGGTGGTGGCGAGTTATGGGCTGTATAGGTTTTTTCCTAGTCCTTTGAGAGTTTTTT GGGTATTGCAAACGACTTTTGGTTTTTGTAGTTGTTGCAATTGCGGCTTCTAGTTTTTGAGGCTATTGTTCTTATTTGCC GCTGTTTTGGGTTGGTTTTTTTTTGTTCTTTTTGGTGGGCAGCCTTGGTCGTGTGGGTTTTTGATACCGTGTTGAGGTTG TTTTGGTGTATATCTTATCAGTTTCCTCATTATTATTATATATATTTTCTCCTTTTGAAAAAAAAAAAAAGTTCAATTGA ATAATGCTCAGGAGACTTAATATTCAATTTTAGACATTCATCCTGAATCCTGATCCAGTTACACTAATAATGTAATGCCT TGCTCTCACTCTAATAATAGTTATACCTTTTTTTTATCTTTGTTCGAGAATCCCCATGGACGTAATTATGAGTCAACTCT CAGTTTAAGGCCCGTGATAATGTAAAACCTTTCCTATTGTAGTGACAAATTTGAACTTCTAACATTGCAATTATATAAAG TTCATCTGGAGTCGCAGTTCACTCCTATTGTGACTTACGAAGGTTGACTTCTAATGATAGTTAAATGTTTTACTATTACT GCCATCACTATCGCTAATCTAATAATAGCCAATTGTTTTGCATTATTTATTTTGCAGCCGAATTGCATCATTTTGGCAAT ATCTCCTGCTAATCAAGACCTTGCTACTTCAGATGCAATTAAGATTTCCCGTGAAGTAGATCCCAAAGGTAAGATGGTGA ACATGATTTTTTCTTAAAAAGTACTGGCAAGAGGAAATAGTGTCATTTGAAGTTAGATGTATTAAGTAATATCATAATTA GCTAAAGCTGAAACAATAGATGTTAAAAATGAAAAACATAGAAGGGTTCATAACATCGTTTGCAAAGCAATTTAAGTTGT ATAGATTGATTATTGTATATTGTATTAGGCTTCTTATACCAATAAATTATCATATTTGTATTGAATATCAAATACAATTT TCTTTATATTATCATATTTGTAGTGAATATCAAATACAATTTTCTTTATATATAATTGTTGGTGTTGGAATAGGTAAATT TTAGTTGATTTAATACCGAAATGTTTCACTGAGATTCTATGCAGTTATTGTCAAAAGAGAAATACTATTAACACACTGTC TACGCATTCTTTGTCATAGAGTGAAATCATGTAGGTTCCATCAAATAACGAGAGGTTCCCAGCCTCCCACCAAATATGGG ATGGAAATCACATGAGTTTCATCTAATAAGAATGTGTTGATCCACCAGATTATTAAATGTATTGAATTGATTTTCTGAGG GAGGAAGTAAATTGTATTGGGCTAGTTCACATCTTTAGAGAAAAAGTATTGTTGCGGACTACCTTGCAAAGAAGGCATGT AATAGAGAAAAGGAAATATGGACACTGTTAGATAGGCACTAAGAGTGGTGCCTCTTGTAAAGCTTTCTTCTGCAAGTTCT TGCTGATATATTTATGAATGAATGTTTCAGTGCTTCAAAAAAAAAAGTGTTGATATGAGTATAGTAGAGACAGTGTATAT TATTGACTATATACAGTGATTTGTATAGATACAATGCAAAAGAGAAAAAGGAAAGTATCGCCCTGATTTTGGAGATATAT TCCTAATATCCTAAGATAACAAATCTTCCTAAAATACGAATATAAACAATTATCTGTCAAATAAATTAGCAACTTAATCA ACTCAAATATTCACACAATCTGGACTACTATGTGGCTGAAAATCACTTGTTTATAAAATTATTTTAATTTTTAGGGGAAA GGACATTTGGAGTTTTGACAAAGATTGATCTTATGGACAAAGGTACTGATGCAGTTGAAGTAAGCATTCTCTTCCTCCTT TAAATTCAGAAATGGTAGGCTACCGTGCAATGTTTGCCTCAGGCAAAACTCTTTCCTATTTGGTGTCCTTTGACCATGCT TTTGGCATCAAAAGAGTTATTTTTGTACTTTCAGGAATTTAGTATAAAATATAAACTCAGATTACAATATAGAAGTAGGA GTGCAATTATGGTAAACAAATTTCATATAGTTGTCATTTGATGATTAAAACGCATGGTAAACAATTTGGAGTTTTGACAC TTGGGGATATCTACTCACTGAAATGGAGGACCAGGATAATATATCTCGAACTTATTTAGTGACCTTGTTATGGTTTGGCT TATATTTTGCCTTTACATGTCTCAACAGTTGTTTGAAACTTTAGAATAACACAGACAATCCTTTTCTCGGAGTTAAGATT TCCCTATTTGGTTTATTTTCTTTCGTTTATAAGCTTAAATTTCTGGAACTGAACTTTTCAAGTTCATGGAGTGGCTTCCT CTTATGTTTCCTCCCTCCTATTCCTTTTTTCAGATCCTTGAAGGTAGATCATATAAGTTAAATTACCCTTGGATTGGTGT TGTTAATCGCTCCCAAGCTGACATCAACAAAAGTGTTGATATGATTGCGGCTCGACGTAGAGAGAATGAGTATTTTGCAA ACACCCCAGAATATAGACATCTTGCTAGCAGGATGGGCTCTGTGCATCTAGGAAAGGTGATGTCTAAGGTATGTGAAATC TTCTATTGACACATTCATTCGGGATGTACATGTTACTTTTTTGCAAAATTGGTCAATTCATTATGGTCCTTTTTTATGTC TTGTTTTCAGCATTTAGAAACTGTTATCAAGTCTCGGATCCCAGGGCTTCAATCACTCATTAACAAGACTATTATTGAGT TGGAGACAGAATTGACCCGTATTGGGAAACCTATTGCCGCTGATACTGGAGTAAACCACCTCCTCCGATCTCTCCCCCTT TCTCCCATTTGCTTTTACAAATGCATGAATTATTGATGTTCTTTCTCCATTTATAGGGGAAGTTGTACATGGTAATGGAA ATCTGTCGAACTTTTGATCAGATATTTAAAGATCATCTTGATGGCATGTATGTTCCTCTTTCCCCTTTTGATGAATTAAC ACGTCATTTTTCATATCAAAAAGATCCGATTTGACCTTGGAAATGATTGAATTTCTACAGACGATCTGGTGGTGAGAAAA TTTACCAAGTATTTGATAATCAATTTCCAGCAGCTCTAAAAAGGCTGCAGTTTGACAAGCATCTATCAATGGACACTGTA CGCAAACTAATAACTGAAGCAGATGGGTATCAACCTCATCTCATTGCTCCTGAGCAAGGATATCGCCGACTTATTGAATC TTGCATAGTATCAATGAGAGGCCCTGCTGAAGCAGCAGTTGATGCTGTATGTATTTTACTAAAATATAAATAAATACTTT GCTATGAGTTACAACTTGTAACATGTTCGTTTAAGAAATTACTTGTGCTAAAATTGTAGCTGACTTCTTCCTCTATTTTT TTGACCTGATTAACTGAAAAATCATATTGACTCTGGCACTATTTAGGCTTAAGAAACATTCGCAAATCTTTACTTGTCAA AGTTGACATCATTTAAGGCAAAAGGTTGAAGTCAATCATTGAGGTGAAATTATTTTCTAATGTTGTGTTATTCATTAAAC TCCTTACTTTTATAATGTTTCAGGTTCATGGAATTCTGAAGGATATGATTCACAAGTCTATGAGTGAGACAATGGCAAGT AGCAAATTGCTTATTTTATGTTAAGTCTATATAGTTCTCTACATGTCTAAGTCTGGAGATAATTTGTATAACTTTAGCTG AATATTCAACTTGGTATATATTTTTTCCAGTGCCTTAATAATTTCAGTTTTATGTTTGATTGTAGGAATTAAAGCAGTAC CCTACCTTGAAAGTCGAGCTCGGAAGTGCAGCTGTTGATTCACTGGAAAGGATGAGAGAAGAAAGTAAGAAAGCAACTCT GCAATTAGTAGACATGGAATGTGGTTATTTGACAGTTGAATTCTTTCGCAAACTTCCTCAAGACGCAGAGAAGGGCGGAA ATCCAACCCACTCACTTTTTGACAGATATAATGATGCTTATCTTCGTCGAATTGGTAAGAAACTAAAATTTAAAATAAAT ATTTTATGCCTATGCTCCTAATAATTGAAATAATAAAGGACTTTGAGTCCATTAGCTACATATTAGAACATATGATATTG AAATTAGAGCTATTGTTTTTCACCCTTTACTGAGATTATTCCTTGTATACAACAGCTACCACTGTCTTGTCATATGTGAA CATGGTATGTGGGAGTCTAAGGCATACCATTCCCAAGTCTGTAGTTTATTGTCAAGTGCGGGAAGCAAAGCGCAGTTTAC TGGATCATTTCTTCACAGAGTTGGGGAAAAAAGAGGTGAGCTTTGTTATTTTCCTTGAAGAATATAGGCATGTCTGGTGA GAATAGGGTGAGCTTAATTTTGCATGATCTACAAATTGTTTTGCAGGGTAAACAACTAGCTGCATTGCTGAATGAGGATC CAGCAATCATGCAGCAAAGGACCTCACTTTCTAAGAGGTTAGAGCTGTATAGAAGTGCCCAATCAGAAATTGAGGCTGTT GCATGGGACAAGTAA
CDS sequence (LotjaGi3g1v0395300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAATCTGATACAATTGGTGAACAAAATCCAAAGAGCATGCACCGCGCTCGGCGATCACGGCGAGGAGAGTGCCTT GCCCACTCTCTGGGATGCCCTTCCCTCCATCGCCGTCGTCGGAGGACAGAGTTCAGGGAAATCTTCAGTGTTGGAGAGCA TTGTTGGGAAGGATTTTTTGCCTCGTGGATCTGGAATTGTTACGCGGAGGCCTCTTGTTTTGCAGCTTCATAAGATTGAT GATTCCAGAGAGTATGCTGAATTCATGCACCTTCCAAGGAAGAGATTTACTGATTTTGCTGCTGTAAGACAAGAGATAGC TGATGAGACTGATAGAGAAACAGGTCGCTCCAAGGGTATTTCATCAGTTCCCATCCATCTCAGTATCTACTCTCCTAATG TTGTCAATCTGACACTGGTTGATCTTCCGGGACTTACAAAAGTTGCTGTTGAGGGTCAACCAGATAGCATTGTGCAAGAC ATTGAAAATATGGTTCGGGCCTTTATCGAAAAGCCGAATTGCATCATTTTGGCAATATCTCCTGCTAATCAAGACCTTGC TACTTCAGATGCAATTAAGATTTCCCGTGAAGTAGATCCCAAAGGGGAAAGGACATTTGGAGTTTTGACAAAGATTGATC TTATGGACAAAGGTACTGATGCAGTTGAAATCCTTGAAGGTAGATCATATAAGTTAAATTACCCTTGGATTGGTGTTGTT AATCGCTCCCAAGCTGACATCAACAAAAGTGTTGATATGATTGCGGCTCGACGTAGAGAGAATGAGTATTTTGCAAACAC CCCAGAATATAGACATCTTGCTAGCAGGATGGGCTCTGTGCATCTAGGAAAGGTGATGTCTAAGCATTTAGAAACTGTTA TCAAGTCTCGGATCCCAGGGCTTCAATCACTCATTAACAAGACTATTATTGAGTTGGAGACAGAATTGACCCGTATTGGG AAACCTATTGCCGCTGATACTGGAGGGAAGTTGTACATGGTAATGGAAATCTGTCGAACTTTTGATCAGATATTTAAAGA TCATCTTGATGGCATACGATCTGGTGGTGAGAAAATTTACCAAGTATTTGATAATCAATTTCCAGCAGCTCTAAAAAGGC TGCAGTTTGACAAGCATCTATCAATGGACACTGTACGCAAACTAATAACTGAAGCAGATGGGTATCAACCTCATCTCATT GCTCCTGAGCAAGGATATCGCCGACTTATTGAATCTTGCATAGTATCAATGAGAGGCCCTGCTGAAGCAGCAGTTGATGC TGTTCATGGAATTCTGAAGGATATGATTCACAAGTCTATGAGTGAGACAATGGCAATGCCTTAA
Protein sequence (LotjaGi3g1v0395300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MENLIQLVNKIQRACTALGDHGEESALPTLWDALPSIAVVGGQSSGKSSVLESIVGKDFLPRGSGIVTRRPLVLQLHKID DSREYAEFMHLPRKRFTDFAAVRQEIADETDRETGRSKGISSVPIHLSIYSPNVVNLTLVDLPGLTKVAVEGQPDSIVQD IENMVRAFIEKPNCIILAISPANQDLATSDAIKISREVDPKGERTFGVLTKIDLMDKGTDAVEILEGRSYKLNYPWIGVV NRSQADINKSVDMIAARRRENEYFANTPEYRHLASRMGSVHLGKVMSKHLETVIKSRIPGLQSLINKTIIELETELTRIG KPIAADTGGKLYMVMEICRTFDQIFKDHLDGIRSGGEKIYQVFDNQFPAALKRLQFDKHLSMDTVRKLITEADGYQPHLI APEQGYRRLIESCIVSMRGPAEAAVDAVHGILKDMIHKSMSETMAMP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 444 | 444 | 2.3E-291 | – | |
| PANTHER | 1 | 444 | 444 | 2.3E-291 | ||
| SMART | 1 | 250 | 250 | 2.8E-116 | ||
| Gene3D | 1 | 322 | 322 | 1.9E-143 | – | |
| SUPERFAMILY | 7 | 307 | 301 | 2.22E-72 | ||
| ProSiteProfiles | 31 | 299 | 269 | 56.923 | ||
| PRINTS | 34 | 52 | 19 | 5.4E-60 | ||
| CDD | 34 | 299 | 266 | 1.15847E-129 | ||
| Pfam | 37 | 212 | 176 | 5.5E-54 | ||
| PRINTS | 59 | 76 | 18 | 5.4E-60 | ||
| ProSitePatterns | 60 | 69 | 10 | - | ||
| PRINTS | 131 | 148 | 18 | 5.4E-60 | ||
| PRINTS | 181 | 199 | 19 | 5.4E-60 | ||
| PRINTS | 200 | 216 | 17 | 5.4E-60 | ||
| Pfam | 221 | 441 | 221 | 5.7E-53 | ||
| PRINTS | 223 | 242 | 20 | 5.4E-60 | ||
| Gene3D | 323 | 441 | 119 | 1.9E-143 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi3g1v0395300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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