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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR019762
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 31 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 7.623s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0047099.1
n.a. Chain A, Arabidopsis Thaliana Dynamin-Related Protein 1a (Atdrp1a) In Prefission Stategi|390136234|pdb|3T34|B Chain B, Arabidopsis Thaliana Dynamin-Related Protein 1a (Atdrp1a) In Prefission Stategi|390136235|pdb|3T35|A Chain A, Arabidopsis Thaliana Dynamin-Related Protein 1a In Postfission Stategi|390136236|pdb|3T35|B Chain B, Arabidopsis Thaliana Dynamin-Related Protein 1a In Postfission Stategi|390136237|pdb|3T35|C Chain C, Arabidopsis Thaliana Dynamin-Related Protein 1a In Postfission St chr0 15713457 15714079 +
2 domain predictions
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Lj1g3v3608410.1
n.a. PREDICTED: dynamin-related protein 1E-like isoform 1 [Glycine max] gi|356527252|ref|XP_003532226.1| chr1 41564436 41570974 +
2 domain predictions
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Lj3g3v0618160.2
n.a. PREDICTED: dynamin-related protein 1E-like [Cicer arietinum] gi|502155644|ref|XP_004510142.1| chr3 6741577 6749466 -
2 domain predictions
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Lj3g3v2442010.1
n.a. PREDICTED: dynamin-related protein 12A-like isoform X2 [Cicer arietinum] gi|502156858|ref|XP_004510672.1| chr3 30176307 30176904 -
2 domain predictions
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Lj4g3v0000080.1
n.a. PREDICTED: dynamin-2B-like [Glycine max] gi|356563206|ref|XP_003549855.1| chr4 61734 98073 +
2 domain predictions
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Lj4g3v3004140.1
n.a. PREDICTED: dynamin-related protein 5A-like [Cicer arietinum] gi|502139021|ref|XP_004503616.1| chr4 39882253 39887648 +
2 domain predictions
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Lj4g3v3113200.1
n.a. PREDICTED: dynamin-related protein 1C-like isoform X1 [Cicer arietinum] gi|502138270|ref|XP_004503345.1| chr4 41611357 41618187 +
2 domain predictions
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LotjaGi1g1v0597700.1
n.a. Dynamin, putative; TAIR: AT3G60190.1 DYNAMIN-like 1E; Swiss-Prot: sp|Q9FNX5|DRP1E_ARATH Dynamin-related protein 1E; TrEMBL-Plants: tr|I1KYV5|I1KYV5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0597700 LjG1.1_chr1 113727320 113734554 +
2 domain predictions
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LotjaGi1g1v0597700.2
n.a. Dynamin, putative; TAIR: AT3G60190.1 DYNAMIN-like 1E; Swiss-Prot: sp|Q9FNX5|DRP1E_ARATH Dynamin-related protein 1E; TrEMBL-Plants: tr|I1KYV5|I1KYV5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0597700 LjG1.1_chr1 113727562 113733750 +
2 domain predictions
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LotjaGi1g1v0719900_LC.1
n.a. Dynamin-like family protein; TAIR: AT5G42080.1 dynamin-like protein; Swiss-Prot: sp|Q39828|SDL5A_SOYBN Dynamin-related protein 5A; TrEMBL-Plants: tr|I3SR93|I3SR93_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0719900_LC LjG1.1_chr1 129020035 129026467 +
2 domain predictions
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LotjaGi2g1v0442100.1
n.a. Dynamin-like family protein; TAIR: AT5G42080.1 dynamin-like protein; Swiss-Prot: sp|Q39828|SDL5A_SOYBN Dynamin-related protein 5A; TrEMBL-Plants: tr|A0A151SCZ5|A0A151SCZ5_CAJCA Dynamin-related protein 5A; Found in the gene: LotjaGi2g1v0442100 LjG1.1_chr2 93807665 93814071 +
2 domain predictions
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LotjaGi2g1v0442100.2
n.a. Dynamin-like family protein; TAIR: AT5G42080.1 dynamin-like protein; Swiss-Prot: sp|Q39828|SDL5A_SOYBN Dynamin-related protein 5A; TrEMBL-Plants: tr|A0A0B2QVL7|A0A0B2QVL7_GLYSO Dynamin-related protein 5A; Found in the gene: LotjaGi2g1v0442100 LjG1.1_chr2 93807910 93813475 +
2 domain predictions
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LotjaGi2g1v0442100.3
n.a. Dynamin-like family protein; TAIR: AT5G42080.1 dynamin-like protein; Swiss-Prot: sp|Q39828|SDL5A_SOYBN Dynamin-related protein 5A; TrEMBL-Plants: tr|A0A0L9TH92|A0A0L9TH92_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0442100 LjG1.1_chr2 93807910 93813475 +
2 domain predictions
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LotjaGi2g1v0442100.4
n.a. Dynamin-like family protein; TAIR: AT5G42080.1 dynamin-like protein; Swiss-Prot: sp|Q39828|SDL5A_SOYBN Dynamin-related protein 5A; TrEMBL-Plants: tr|A0A151SCZ5|A0A151SCZ5_CAJCA Dynamin-related protein 5A; Found in the gene: LotjaGi2g1v0442100 LjG1.1_chr2 93807910 93813475 +
2 domain predictions
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LotjaGi3g1v0054800.1
n.a. Dynamin homolog; TAIR: AT1G59610.1 dynamin-like 3; Swiss-Prot: sp|Q9LQ55|DRP2B_ARATH Dynamin-2B; TrEMBL-Plants: tr|Q9SDX4|Q9SDX4_ASTSI Dynamin homolog; Found in the gene: LotjaGi3g1v0054800 LjG1.1_chr3 5716872 5729123 -
2 domain predictions
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LotjaGi3g1v0054800.2
n.a. Dynamin homolog; TAIR: AT1G59610.1 dynamin-like 3; Swiss-Prot: sp|Q9LQ55|DRP2B_ARATH Dynamin-2B; TrEMBL-Plants: tr|I1LVI3|I1LVI3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0054800 LjG1.1_chr3 5717941 5728804 -
2 domain predictions
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LotjaGi3g1v0054800.3
n.a. Dynamin homolog; TAIR: AT1G59610.1 dynamin-like 3; Swiss-Prot: sp|Q9LQ55|DRP2B_ARATH Dynamin-2B; TrEMBL-Plants: tr|I1LVI3|I1LVI3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0054800 LjG1.1_chr3 5724890 5728804 -
2 domain predictions
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LotjaGi3g1v0073000.1
n.a. Dynamin, putative; TAIR: AT3G60190.1 DYNAMIN-like 1E; Swiss-Prot: sp|Q9FNX5|DRP1E_ARATH Dynamin-related protein 1E; TrEMBL-Plants: tr|A0A151SN43|A0A151SN43_CAJCA Dynamin-related protein 1E; Found in the gene: LotjaGi3g1v0073000 LjG1.1_chr3 7996556 8005092 -
2 domain predictions
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LotjaGi3g1v0073000.2
n.a. Dynamin, putative; TAIR: AT3G60190.1 DYNAMIN-like 1E; Swiss-Prot: sp|Q9FNX5|DRP1E_ARATH Dynamin-related protein 1E; TrEMBL-Plants: tr|A0A151SN43|A0A151SN43_CAJCA Dynamin-related protein 1E; Found in the gene: LotjaGi3g1v0073000 LjG1.1_chr3 7997406 8004885 -
2 domain predictions
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LotjaGi3g1v0073000.3
n.a. Dynamin, putative; TAIR: AT3G60190.1 DYNAMIN-like 1E; Swiss-Prot: sp|Q9FNX5|DRP1E_ARATH Dynamin-related protein 1E; TrEMBL-Plants: tr|A0A151SN43|A0A151SN43_CAJCA Dynamin-related protein 1E; Found in the gene: LotjaGi3g1v0073000 LjG1.1_chr3 7997406 8004885 -
2 domain predictions
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LotjaGi3g1v0073000.4
n.a. Dynamin, putative; TAIR: AT3G60190.1 DYNAMIN-like 1E; Swiss-Prot: sp|Q9FNX5|DRP1E_ARATH Dynamin-related protein 1E; TrEMBL-Plants: tr|A0A151SN43|A0A151SN43_CAJCA Dynamin-related protein 1E; Found in the gene: LotjaGi3g1v0073000 LjG1.1_chr3 7997406 8004888 -
2 domain predictions
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LotjaGi3g1v0395300.1
n.a. Dynamin, putative; TAIR: AT3G61760.1 DYNAMIN-like 1B; Swiss-Prot: sp|Q39828|SDL5A_SOYBN Dynamin-related protein 5A; TrEMBL-Plants: tr|A0A0S3SYT0|A0A0S3SYT0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0395300 LjG1.1_chr3 79523901 79531554 -
2 domain predictions
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LotjaGi3g1v0395300.2
n.a. Dynamin; TAIR: AT3G61760.1 DYNAMIN-like 1B; Swiss-Prot: sp|Q84XF3|DRP1B_ARATH Dynamin-related protein 1B; TrEMBL-Plants: tr|A0A0L9T6L3|A0A0L9T6L3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0395300 LjG1.1_chr3 79524419 79531313 -
2 domain predictions
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LotjaGi3g1v0395300.3
n.a. Dynamin, putative; TAIR: AT3G61760.1 DYNAMIN-like 1B; Swiss-Prot: sp|Q39828|SDL5A_SOYBN Dynamin-related protein 5A; TrEMBL-Plants: tr|A0A0S3SYT0|A0A0S3SYT0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0395300 LjG1.1_chr3 79524419 79531313 -
2 domain predictions
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LotjaGi4g1v0001200.1
n.a. Dynamin family protein; TAIR: AT1G59610.1 dynamin-like 3; Swiss-Prot: sp|Q9LQ55|DRP2B_ARATH Dynamin-2B; TrEMBL-Plants: tr|I1MQT0|I1MQT0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0001200 LjG1.1_chr4 232251 267769 +
2 domain predictions
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LotjaGi4g1v0040300.1
n.a. Dynamin, putative; TAIR: AT4G33650.1 dynamin-related protein 3A; Swiss-Prot: sp|Q8S944|DRP3A_ARATH Dynamin-related protein 3A; TrEMBL-Plants: tr|K7L2I2|K7L2I2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0040300 LjG1.1_chr4 4757486 4766768 +
2 domain predictions
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LotjaGi4g1v0191000.1
n.a. Dynamin, putative; TAIR: AT3G60190.1 DYNAMIN-like 1E; Swiss-Prot: sp|Q9FNX5|DRP1E_ARATH Dynamin-related protein 1E; TrEMBL-Plants: tr|A0A151R3B5|A0A151R3B5_CAJCA Dynamin-related protein 1E; Found in the gene: LotjaGi4g1v0191000 LjG1.1_chr4 43720590 43726033 +
2 domain predictions
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LotjaGi4g1v0435900.1
n.a. Dynamin-like family protein; TAIR: AT5G42080.1 dynamin-like protein; Swiss-Prot: sp|Q39828|SDL5A_SOYBN Dynamin-related protein 5A; TrEMBL-Plants: tr|I1K693|I1K693_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0435900 LjG1.1_chr4 80900049 80905871 +
2 domain predictions
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LotjaGi4g1v0435900.2
n.a. Dynamin-like family protein; TAIR: AT5G42080.1 dynamin-like protein; Swiss-Prot: sp|Q39828|SDL5A_SOYBN Dynamin-related protein 5A; TrEMBL-Plants: tr|I1K693|I1K693_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0435900 LjG1.1_chr4 80900505 80905485 +
2 domain predictions
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LotjaGi4g1v0435900.3
n.a. Dynamin-like family protein; TAIR: AT5G42080.1 dynamin-like protein; Swiss-Prot: sp|Q39828|SDL5A_SOYBN Dynamin-related protein 5A; TrEMBL-Plants: tr|A0A0B2Q5E1|A0A0B2Q5E1_GLYSO Dynamin-related protein 5A; Found in the gene: LotjaGi4g1v0435900 LjG1.1_chr4 80900505 80905485 +
2 domain predictions
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LotjaGi4g1v0457600.1
n.a. Dynamin; TAIR: AT1G14830.1 DYNAMIN-like 1C; Swiss-Prot: sp|Q8LF21|DRP1C_ARATH Dynamin-related protein 1C; TrEMBL-Plants: tr|G7LBF4|G7LBF4_MEDTR Dynamin-like protein 1E; Found in the gene: LotjaGi4g1v0457600 LjG1.1_chr4 82886459 82894088 +
2 domain predictions
 –