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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0396900 |
| Transcript ID | LotjaGi3g1v0396900.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Exportin-2; TAIR: AT2G46520.1 cellular apoptosis susceptibility protein, putative / importin-alpha re-exporter; Swiss-Prot: sp|Q9ZPY7|XPO2_ARATH Exportin-2; TrEMBL-Plants: tr|K7MET7|K7MET7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0396900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:79816393..79821949) extracted from Lotus japonicus Gifu genome v1.2.
GTCACAGTTAAACCCCGATTCAAAAGCCCTCATCACTCTTCACTTTCCCTCTTGCCCAAACGCTCTCTCTTTCATTCTCT CACTCACTCTTCGTTTTAAAATCAACGAGGTTTCGAACCTCAAACCCTAGCTACGAAACCATGGAGTGGAACCCTCAAAC TCTCCAATTCCTCTCCGAATGCTTCCTCCACACTCTCTCTCCGGCACCGGAGCCTCGCCGCCGCGCCGAATCCTCACTCG CCGATGCCGCTGCCCAACCCAACTTCGCCCTCGCCGTCATCCGCCTCGTCACCGAACCTTCCATCGACGAGCAGATCCGC CAAGCCGCCGCCGTCACCTTCAAGAACCACCTCCGCCTCCGCTGGTCCACCGACGACGCCCCGATCCTCGAGCCTGAGAA GGAGCAGATCAAAACCCTAATCGTCCCGCTCATGCTCTCCGCTACTCCCAAAATCCAGGCGCAGCTCAGTGAAGCCCTAG CCATCATCAGCAACCACGATTTCCCCAAATCGTGGCCGCAGCTTCTACCGGAACTCATCTCCAGCCTCCAGACTGCGTCG CAGGCCTCCGATTATGCTTCCATTAACGGTATTCTCCGTACTGCTAATTCTATTTTCAAGAAGTTTCGATTCCAGTACAA AACCAATGATCTCTTGCTTGATTTGAAGACGTGTTTGGATAATTTTGCTCGGCCTTTACTTGAGATTTTCCTTAAAACCG CTTCGTTGATCGATGCTGCTGCCGCGAACCCGGCTACGGCCGCGGCGAATTTGCGACCCCTTTTCGAGTCGCAGAGGTTG TGCTGTAGGATATTTTACTCGCTGAATTTTCAGGAGCTCCCTGAGTTTTTTGAGGATCACATGGGTGAGTGGATGAATCA GTTCCGAAAATACCTCACTACTAGCTACCCTGCCCTTGAGGGAAGTGGTCCTGATGGTGTTGCGCTTGTGGATGATCTTA GGGCTGCTGTTTGTGAGAATATTAATCTGTACATGGAAAAGAATGAGGAGGAGTTCCAGGGCTTCCTCAATGATTTTGCT CTTGCTGTGTGGACTTTGCTGGGGAATGTGTCCCAGTCGAGCAGCCGTGATCGTCTCGCCATCACAGCGATCAGGTTTCT GACCACGGTTAGTACCAGTGTTCACCATGCTTTGTTTGCTGGTGATGGGGTTATACCACAGATTTGCCAGGGGATTGTGA TCCCAAATGTGAGGTTGAGGGAAGATGATGAGGAGCTGTTTGAGATGAATTATATTGAGTTTATTAGGAGAGATATGGAA GGCAGTGATCTTGATACCCGGAGGAGGATTGCTTGTGAGCTGCTTAAGGGTATTGCAACCCATTATGGAGATGCTGTCAG AAGCATTGTTTCTGCACAGATACAAAGTTTATTAAGTTCCTTTAATGCAAACCCTGTGGCAAATTGGAAGGACAAGGATT GTGCTATATACTTGGTAGTGTCTCTTGCAACCAAAAAGGCTGGAACCAGTTATGTCTCCACAGAACTTGTTGATGTTCCC AGTTTTTTCGAAGCTGTGATTGTCCCTGAGCTTGTGATTGCCCCTGAGCAGCAAAGAGATGTGAATAAGCATCCTATGCT TAAGGCTGGTGCACTCAAATTTTTTACTATGTTCCGGACTCAAATATCCAAGCATGTGGCGTTGAAGTTCTTTCCAAATT TGGTTAATTTCCTTGCTGCAGAGTCCAATGTTGTTCATTCATATGCTGCAAGCTGCATTGAAAAACTCTTGTTGGTGAAG GATGAAGGTGGCAGAGCGCGTTATACTTCAGCAGATATCAATCCATTTTTCGAAATGCTGATGATCAATCTTTTCGGCAC CTTCAAGCTACCAGAGTCTGAAGAGAATCAATATGTGATGAAATGTATTATGAGGGTTCTTGGGGTTGCAGATATAACGG TTGATGTTGCTCGATTTTGCATCGAGGGGCTGGCTTCTCTTCTTTCCGAAGTTTGCAAAAATCCAAAAAATCCCATCTTC AATCACTATCTCTTTGAGTCAGTGGCCATTCTTGTGAGGCGGGCTTGTGAGAGGGACTCATCTCTTGTATCTGTTTTCGA GACAAGCCTTTTTCCTAGACTTCAAATAATATTATCCAATGATGTAACTGAGTTTTTCCCATACACATTTCAGTTGCTTG CCCAGCTTGTTGAGTTAAACAGACCCCCCATCCCACCACTCTACATGCAAATATTTGAGATTCTTTTGTCACCTGAGTCA TGGAAAAGAGCCTCAAATGTTCCTGCCCTTGTGCGTCTACTCCAGGCCTTCCTTCAGAAGGCACCAAATCAGATCTGCCA AGGGGATAGACTGACCAAAGTGCTTGGCATATTTGACACTCTAATACAAGCTTCAAGCACATCTGAACAAGGATTTTACG TGCTTAACACTGTCATTGAAAGTCTTGAGTATGATGCTATTAAGCCTTATATTTCTCACATTTGGGCTGCTCTTTTCAGA GAGCTCCAGAGAAGGCGGACATCAGTAAAGCTCATCAAATCTCTCTTGATATTTATGTCACTCTTTCTGATTAAGCATGG CACTTCAAATGTTGTTGATACTATGAACAGTGTTCAGCCGGGTATATTTACTATGATTTTGAATCAGTTCTGGATTCCTA ATCTTAAGCTAATTACTGGAGCTATAGAGCTCAAATTGACTGCAGTTGCTTCAACCAGACTTATCTGTGAGTCTCCAGTC CTTTTAGATCCTGCAGCTTCTGCATCCTGGGGTAAGATGGTGGATAGCATTGTCACACTTCTTTCCCGGCCAGAAGAGGA TAGAGTTGAGGAAGAACTTGACATGCCAGATATTGCAGAAAATGTGGGTTATACGGCCACCTTTGTTCGACTTTACAATG CTGGAAAGAAAGAAGAAGATCCACTTAAAGATATAGCAGATCCCAGGCAATTTTTTGTTGCTTCATTGTCTCAACTTTCT ACAGTTTCCCCTGGGAGGTACCCTAAGGTCATCAGTGAAAATGTTGATCCGGCAAATCAATCAGCATTGGTTCAGCTTTG CAACACTTACAATCACTCAATAGTTTGAGACTGAGTAAGTTGGTACTTTAGTCACTTTCTTTCTTTCTTTCTGTTTTCAT CAGATTTGTTGGGTTTGTGTCAATGGCTTTTCCTAATTCTCATGTTTTAAGATAAATAATGTCAAATTTTGTCTAACTAT TGGTTGCCATAGTTATATTTGTTCTTGTTCTGTATTTATGTAAGTTCTTTTGGATTAAATACAAGTTTAGCTTTATATTT CTCGACCCATTTATTTGTGCGGGATTTTGGGTTCTTTGTGACTGTTCTAGTTTGTATTGGATATAATTGGTAGCAACAAG CAAAGGATAACAGTTCATATAAAATTTTGTTTTTTAATTATCATCAACAACTCGGGCCCACATCTTCAAGCTGGGGTCCA AGTCCTAATCATCTTCCTGCTGACCTTACCGGGCGGGTCAGTGGGGCCCACCTTTGTTATGCTGCTTAATTTGCAATAAT GTGTTCACAATAGTATGGGGATATATTTACTCTGAAAACCAATGGTTCAAGAAACAATATTCATTCCTAGTATGTTTCTG CCTCTTTTTTTCTCGCTTTCCTTGGCTGGGTAGAACTGTTAGGATTTGGATAACCCAAACAGCCAACACAATTTAGAACA GGGGTAAAGGGGAATTTTCTGAATGAGAAACTGTTATACTAATAAAGAAAAGACACAATGAAGGAAATCCTTCTTTTACA AGGGAAAACACTCTTCCAAAGGTATAAACCTTTAACTAACTCAATAATCAAATCCTACCCCTAACCTAATGTGGGAGCTT TTATTTATAATAATAAACTAACCCTAATAAAGATAGACTTAACTACTAAGAAATAAAGATAGGCTACCAAAATAAATGAT GAACTCCTAAAATAAAAGATAGACTCTTAAGCTAAAAGATTAAAATAAACTAAACTCAGGTCCACATGACAACTAGGCCC AACATTTAGAACCCTAACAGAAACACAGATTACCTTGTTGCAATTTATTTGGGGATTCATCTAGGAGCTCTAAAATTGAT ACTTGACTTGAGTTTTAGCATAGCAATAAAGCAATTATTTCACTCTCTTCAACACTCTCGTTGAATAATAAAAATTCAAG TAGAGTCCACTAAAAATATGAGACCCACATGAATTTCAAGCAATTAGTGAGAAAGTGTTGAAGAGAGTTTAGGAAAGAGA GTGTTGCTAGCACTCCTCATTATCTTTAGTGTTGTCAGAATGAAATATTAGAATCTTGTCCATATGACATTAGTGTCCAT CACCAGCTTCCGTAGTGTACAATTATCTTGGTAGGCTGACTGCTTAATGTCTAAGCTATCTGTATTTTGTCTCCTAAAAT ACATAAAATCCCATATGTTGTTTAGTATTCAAGTCATTTCTCTGTGCTATACTGCTATCTCATTCTTTTATTTTAACCAT ATCCATATGCTTTATCATTCTTTTCATTTTTTCACTGGACTGGAAAGTCTTTTTTCTCTACCTTAAAAGGTTTGTCTATG AGAATGCTTTAATGTTTTTCATTCGGGAAATGTGATGAAATTCGTTGGGTGCTTTGCATGTTTAATGTAATTTAGTTTGA ATTTAAATTCATTTGAAGTGTATAACTTTTGTCTATTGTGGCCAAATCTGATTGGCTGATGATGAATTCGTATTTGAGGT TTTTCGATCCATATAGCAGTACTGTTTTCATTCATGGATATCCTGTTGATATCAATATGACAGGAAACATGTTTTCTCTG TGATATTGTGTGGATGAATTAGTATATTTGTTATGCTTAAAGTTTCCAGTTTGTTGTATAATGAATTGAATTAGTGATTT GACTCATGTCTAAATCTAACAAGGCGTTACTCTACTTCCCAGGATCTTGTGCTGGAATCTGATAGGGTATTATTGTCTGG GTCCTCAGCCTTCTGCGTCATTTATGGGATTGCAAAGGGTAATTGCATTGCAACATTGAAGTGCGACCGATTATTATCAT CATTCATTTTTGTCGGTGCCATGATCTTATGTAGCGATGAACTGGGATTTCTGGTTGGTCCCATTTTGGATACTGTAGGC ATGTGTATGCCTTTGAAGTGCCATTTAATTTTTTTTTTCATGCTCCCCTTTCCCTATTTCCCTGCTGTTAAGCTTATTGA GCATGTCTGTGAGCAAATTGTAAGGAATATCTGCGGTCAATTTTCTGTAAGCTTGCATATTATCAAAGTAAATTTCATAC TAAGGTATCTTGTCTTTCATGGTTCATTCACTTCAATTTATCACATAAATGATAGAAGTGCTCATCATGCTGATTACTCA CTTAATTTTAATGGGAGCAAGACAATAATATTGTTATTATTTTAAGAGTAAAATACACTCCCCTCCCTTAAGGTTTGCCA ATATGACACTCAGCCACATTCTTGATTAAAATCTACACTCCACCCCACCTACTCTACCAAGTTAACTACATCTTAAAAGA TGCTCACGGAATATTCTCTTTAATTCCAAACTAATAG
CDS sequence (LotjaGi3g1v0396900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGTGGAACCCTCAAACTCTCCAATTCCTCTCCGAATGCTTCCTCCACACTCTCTCTCCGGCACCGGAGCCTCGCCG CCGCGCCGAATCCTCACTCGCCGATGCCGCTGCCCAACCCAACTTCGCCCTCGCCGTCATCCGCCTCGTCACCGAACCTT CCATCGACGAGCAGATCCGCCAAGCCGCCGCCGTCACCTTCAAGAACCACCTCCGCCTCCGCTGGTCCACCGACGACGCC CCGATCCTCGAGCCTGAGAAGGAGCAGATCAAAACCCTAATCGTCCCGCTCATGCTCTCCGCTACTCCCAAAATCCAGGC GCAGCTCAGTGAAGCCCTAGCCATCATCAGCAACCACGATTTCCCCAAATCGTGGCCGCAGCTTCTACCGGAACTCATCT CCAGCCTCCAGACTGCGTCGCAGGCCTCCGATTATGCTTCCATTAACGGTATTCTCCGTACTGCTAATTCTATTTTCAAG AAGTTTCGATTCCAGTACAAAACCAATGATCTCTTGCTTGATTTGAAGACGTGTTTGGATAATTTTGCTCGGCCTTTACT TGAGATTTTCCTTAAAACCGCTTCGTTGATCGATGCTGCTGCCGCGAACCCGGCTACGGCCGCGGCGAATTTGCGACCCC TTTTCGAGTCGCAGAGGTTGTGCTGTAGGATATTTTACTCGCTGAATTTTCAGGAGCTCCCTGAGTTTTTTGAGGATCAC ATGGGTGAGTGGATGAATCAGTTCCGAAAATACCTCACTACTAGCTACCCTGCCCTTGAGGGAAGTGGTCCTGATGGTGT TGCGCTTGTGGATGATCTTAGGGCTGCTGTTTGTGAGAATATTAATCTGTACATGGAAAAGAATGAGGAGGAGTTCCAGG GCTTCCTCAATGATTTTGCTCTTGCTGTGTGGACTTTGCTGGGGAATGTGTCCCAGTCGAGCAGCCGTGATCGTCTCGCC ATCACAGCGATCAGGTTTCTGACCACGGTTAGTACCAGTGTTCACCATGCTTTGTTTGCTGGTGATGGGGTTATACCACA GATTTGCCAGGGGATTGTGATCCCAAATGTGAGGTTGAGGGAAGATGATGAGGAGCTGTTTGAGATGAATTATATTGAGT TTATTAGGAGAGATATGGAAGGCAGTGATCTTGATACCCGGAGGAGGATTGCTTGTGAGCTGCTTAAGGGTATTGCAACC CATTATGGAGATGCTGTCAGAAGCATTGTTTCTGCACAGATACAAAGTTTATTAAGTTCCTTTAATGCAAACCCTGTGGC AAATTGGAAGGACAAGGATTGTGCTATATACTTGGTAGTGTCTCTTGCAACCAAAAAGGCTGGAACCAGTTATGTCTCCA CAGAACTTGTTGATGTTCCCAGTTTTTTCGAAGCTGTGATTGTCCCTGAGCTTGTGATTGCCCCTGAGCAGCAAAGAGAT GTGAATAAGCATCCTATGCTTAAGGCTGGTGCACTCAAATTTTTTACTATGTTCCGGACTCAAATATCCAAGCATGTGGC GTTGAAGTTCTTTCCAAATTTGGTTAATTTCCTTGCTGCAGAGTCCAATGTTGTTCATTCATATGCTGCAAGCTGCATTG AAAAACTCTTGTTGGTGAAGGATGAAGGTGGCAGAGCGCGTTATACTTCAGCAGATATCAATCCATTTTTCGAAATGCTG ATGATCAATCTTTTCGGCACCTTCAAGCTACCAGAGTCTGAAGAGAATCAATATGTGATGAAATGTATTATGAGGGTTCT TGGGGTTGCAGATATAACGGTTGATGTTGCTCGATTTTGCATCGAGGGGCTGGCTTCTCTTCTTTCCGAAGTTTGCAAAA ATCCAAAAAATCCCATCTTCAATCACTATCTCTTTGAGTCAGTGGCCATTCTTGTGAGGCGGGCTTGTGAGAGGGACTCA TCTCTTGTATCTGTTTTCGAGACAAGCCTTTTTCCTAGACTTCAAATAATATTATCCAATGATGTAACTGAGTTTTTCCC ATACACATTTCAGTTGCTTGCCCAGCTTGTTGAGTTAAACAGACCCCCCATCCCACCACTCTACATGCAAATATTTGAGA TTCTTTTGTCACCTGAGTCATGGAAAAGAGCCTCAAATGTTCCTGCCCTTGTGCGTCTACTCCAGGCCTTCCTTCAGAAG GCACCAAATCAGATCTGCCAAGGGGATAGACTGACCAAAGTGCTTGGCATATTTGACACTCTAATACAAGCTTCAAGCAC ATCTGAACAAGGATTTTACGTGCTTAACACTGTCATTGAAAGTCTTGAGTATGATGCTATTAAGCCTTATATTTCTCACA TTTGGGCTGCTCTTTTCAGAGAGCTCCAGAGAAGGCGGACATCAGTAAAGCTCATCAAATCTCTCTTGATATTTATGTCA CTCTTTCTGATTAAGCATGGCACTTCAAATGTTGTTGATACTATGAACAGTGTTCAGCCGGGTATATTTACTATGATTTT GAATCAGTTCTGGATTCCTAATCTTAAGCTAATTACTGGAGCTATAGAGCTCAAATTGACTGCAGTTGCTTCAACCAGAC TTATCTGTGAGTCTCCAGTCCTTTTAGATCCTGCAGCTTCTGCATCCTGGGGTAAGATGGTGGATAGCATTGTCACACTT CTTTCCCGGCCAGAAGAGGATAGAGTTGAGGAAGAACTTGACATGCCAGATATTGCAGAAAATGTGGGTTATACGGCCAC CTTTGTTCGACTTTACAATGCTGGAAAGAAAGAAGAAGATCCACTTAAAGATATAGCAGATCCCAGGCAATTTTTTGTTG CTTCATTGTCTCAACTTTCTACAGTTTCCCCTGGGAGGTACCCTAAGGTCATCAGTGAAAATGTTGATCCGGCAAATCAA TCAGCATTGGTTCAGCTTTGCAACACTTACAATCACTCAATAGTTTGA
Protein sequence (LotjaGi3g1v0396900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEWNPQTLQFLSECFLHTLSPAPEPRRRAESSLADAAAQPNFALAVIRLVTEPSIDEQIRQAAAVTFKNHLRLRWSTDDA PILEPEKEQIKTLIVPLMLSATPKIQAQLSEALAIISNHDFPKSWPQLLPELISSLQTASQASDYASINGILRTANSIFK KFRFQYKTNDLLLDLKTCLDNFARPLLEIFLKTASLIDAAAANPATAAANLRPLFESQRLCCRIFYSLNFQELPEFFEDH MGEWMNQFRKYLTTSYPALEGSGPDGVALVDDLRAAVCENINLYMEKNEEEFQGFLNDFALAVWTLLGNVSQSSSRDRLA ITAIRFLTTVSTSVHHALFAGDGVIPQICQGIVIPNVRLREDDEELFEMNYIEFIRRDMEGSDLDTRRRIACELLKGIAT HYGDAVRSIVSAQIQSLLSSFNANPVANWKDKDCAIYLVVSLATKKAGTSYVSTELVDVPSFFEAVIVPELVIAPEQQRD VNKHPMLKAGALKFFTMFRTQISKHVALKFFPNLVNFLAAESNVVHSYAASCIEKLLLVKDEGGRARYTSADINPFFEML MINLFGTFKLPESEENQYVMKCIMRVLGVADITVDVARFCIEGLASLLSEVCKNPKNPIFNHYLFESVAILVRRACERDS SLVSVFETSLFPRLQIILSNDVTEFFPYTFQLLAQLVELNRPPIPPLYMQIFEILLSPESWKRASNVPALVRLLQAFLQK APNQICQGDRLTKVLGIFDTLIQASSTSEQGFYVLNTVIESLEYDAIKPYISHIWAALFRELQRRRTSVKLIKSLLIFMS LFLIKHGTSNVVDTMNSVQPGIFTMILNQFWIPNLKLITGAIELKLTAVASTRLICESPVLLDPAASASWGKMVDSIVTL LSRPEEDRVEEELDMPDIAENVGYTATFVRLYNAGKKEEDPLKDIADPRQFFVASLSQLSTVSPGRYPKVISENVDPANQ SALVQLCNTYNHSIV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 1 | 968 | 968 | 3.52E-132 | ||
| PANTHER | 6 | 966 | 961 | 0.0 | – | |
| PANTHER | 6 | 966 | 961 | 0.0 | – | |
| Gene3D | 7 | 970 | 964 | 2.8E-269 | ||
| SMART | 29 | 100 | 72 | 1.1E-11 | ||
| ProSiteProfiles | 29 | 100 | 72 | 18.848 | ||
| Pfam | 29 | 99 | 71 | 9.9E-13 | ||
| Pfam | 158 | 533 | 376 | 1.7E-131 | ||
| Pfam | 534 | 965 | 432 | 3.0E-152 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Intracellular protein transport | The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell. | ||
| Molecular function | Ran GTPase binding | Interacting selectively and non-covalently with Ran, a conserved Ras-like GTP-binding protein, implicated in nucleocytoplasmic transport, cell cycle progression, spindle assembly, nuclear organization and nuclear envelope (NE) assembly. |
Expression pattern of LotjaGi3g1v0396900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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