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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0416000 |
| Transcript ID | LotjaGi3g1v0416000.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Developmentally regulated GTP binding protein; TAIR: AT1G17470.1 developmentally regulated G-protein 1; Swiss-Prot: sp|Q9LQK0|DRG1_ARATH Developmentally-regulated G-protein 1; TrEMBL-Plants: tr|I1KHA2|I1KHA2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0416000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:82176485..82179038) extracted from Lotus japonicus Gifu genome v1.2.
ATGCCTTTGACTCATGTAGATGAGAAGCTTTGCTATCAGATTCTGCATGAGTACAAAATTCACAATGCAGAGGTATAGAA CAAACTTTAAAGTTATATCAGTTGTAATTCATTTTCATGAACCGTTAATTATGGGATATTATCAGTATGCAGTTACAGTT GCAAATGTTAATTGCATTTTTTACTACTGCCATAGTTTGTCTAAATATGATGGAGCAAGTGTAGTGACTTGGGATGCTTG GCTGGTTGGTGATGTAAGCATGCTATCTTTTGCATATAATATGATTTTATAACTTGTAACAGTCAATGGCCAACTCTTAT AAAACCTTAGAAAGAAGCTCTTTTAATGTCAGATTTTATGTAAAGTGAGAAAGTGATGGTGTATCCATGCTTAATTGAAT CAAAAGTGCACTGTAATCTTAACTCAAGAAATGAAAGGGTGGGTACACCCTCTTCCTCACATTATGTACAAGTCCACTTT ATAGGAGATTTGTCCAAAGCCTTTGTCTGTTATAGAAAAGCCCAAGAATGACTTCATATATCTATCTTAAAGCCAAAAGC ATTAGTCAAAGACCAAAGATGTACAAGTCCACTTTATAGGAGATTTGTCCAAAGCCTTTTCCGATTGAAACGTGCTCAGT TTCACAGGCTTGCATGTTCTGAAAATTAGTTTTATCATAAGGAGTGGCAGAAACAAGGAACATACTCCTAATCATTTCAT TATAGAGGCCTTTGATACTGTGTCAAATATTGCTCACCTTAAAGCCAAAAGCATTAGTCAAAGACCAAAGAATGATTTTG TATATTTAACATTCGCTGTAAAATCTAAGTATTTTTCATATGACGAGGTCATCATTGAGCATTCAATGTCATAGCTTTCT TTCTGAAATGAGGAGAAAAATGTCTGGAGAAAAATTAAAGTGGAAATGAGCAGTAATTTACACTCTTGTTTAATCATGTT ATCAACAGAAGTTACTTTGTTGCCTGAAAACAATTCACGGATTCCTTATTTGTTATTTGATTTTCTTCTGCATTTTGTTT GCATGGTTCTCTTTCACGTCTATCTGAGGCTAAGTGCATCTGTATTGCTGAGTTTGATCCTTGATGTCACTTGTTCCTGT TCATTAACGTCCTTCCAAGTAGAATTGGACTTTCATGTTGGCGGAAACTATGATTATGAAGATCAGTCTGGCATTTTTCT GTGAATGAGAAATCCTAGCAAAATTCTTTTGAACACGCTCTCCAGCACAGCACACTCAATGTGATTGGTTGATTTTTTAA AAAGTTAACATATTTCTCTCATTTCTTAAAATAATAGAACACTTTTTAAAAAATAAACCAATCATACTGAGTGTGTTGAA GAGTGTCCAAAAGAGTGTATTGATAGCACTCCTTTTCTGTGAATATAAAGTATCTTGTCTAGAGTTGTCATGTTGAATTT TGTAGTTTTCCTCATTACATCTGATAGATTCCGTAATTTTCCTTCTTACAATTACTATAATATAATCAGGTCTCTGTTTA CCGCTATTTTCTACCTATATCAAGGGGTCAACTGACAACTTCAATTTCAGATTCTTTTCCGTGAGGATGCCACAGTGGAT GATCTCATTGATGTCATTGAAGGAAATCGTAAATACATGAAGTGTGTATATGTCTACAACAAGATAGATGTTGTTGGTAT TGATGATGTGGACAGATTAGCCCGTCAACCTAATTCTGTTGTCATTAGTTGCAATTTGAAGGTAGTTTCATACTTTCAGT GCCAACAGAAGAATACAAGATACCATGAAGTTTTAGTGATTTTTTCAAAATATTCATAAATTCATGTTTTATGAACATTT TTTTTGTATATAGTAACACATAATTTTGTGTTTTTGTGAACAGCTGAACTTAGACAGACTACTTTCGAGGATGTGGGATG AAATGGGTCTGGTTAGAGTTTATACAAAACCTCAAGGCCAGCAGCCTGATTTCGCTGAGCCTGTGGTTTTATCTGCTGTA TGTTGTCTTATCATTATGCTTATAATAAACAGCTGTCCCTTATTCTATTTTACTTTTTTGAAAACCTTTAGCTTTTTTGT TGTGTTTTTATATTCTTCCAATCCATCAGAGTCATCACTTTCTCTGGCAAATTGTTTTAGGATAGAGGTGGCTGCACTGT AGAAGACTTCTGCAACCACATACACAGAAGTTTGGTGAAGGACGTGAAGTATGTGCTGGTCTGGGGAACAAGTGCTAGGC ACTACCCACAACATTGTGGCCTTGCTCATTATCTTAATGATGAGGATGTGGTTCAGATTGTCAAGAAAAAGGTACCCTTC ATCTTGTTTTGTGTCGTGTGACTGATCGGTGTATCACTGTGTTCGAACTTTGAATTCCATGTCGTTTACTTGTTACTGGC TGAAAATGCTTTACATTTGTGATAATGAGAGATTGAAACAATGATGTGTGTCCTTCAGGAAAGAGATGAGGGAGGAAGGG GTCGATTCAAGTCGCATTCCAATGCTCCTGCGCGGATATCTGACAGAGAGAAGAAGGCTCCACTGAAGACATAA
CDS sequence (LotjaGi3g1v0416000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCTTTGACTCATGTAGATGAGAAGCTTTGCTATCAGATTCTGCATGAGTACAAAATTCACAATGCAGAGATTCTTTT CCGTGAGGATGCCACAGTGGATGATCTCATTGATGTCATTGAAGGAAATCGTAAATACATGAAGTGTGTATATGTCTACA ACAAGATAGATGTTGTTGGTATTGATGATGTGGACAGATTAGCCCGTCAACCTAATTCTGTTGTCATTAGTTGCAATTTG AAGCTGAACTTAGACAGACTACTTTCGAGGATGTGGGATGAAATGGGTCTGGTTAGAGTTTATACAAAACCTCAAGGCCA GCAGCCTGATTTCGCTGAGCCTGTGGTTTTATCTGCTGATAGAGGTGGCTGCACTGTAGAAGACTTCTGCAACCACATAC ACAGAAGTTTGGTGAAGGACGTGAAGTATGTGCTGGTCTGGGGAACAAGTGCTAGGCACTACCCACAACATTGTGGCCTT GCTCATTATCTTAATGATGAGGATGTGGTTCAGATTGTCAAGAAAAAGGAAAGAGATGAGGGAGGAAGGGGTCGATTCAA GTCGCATTCCAATGCTCCTGCGCGGATATCTGACAGAGAGAAGAAGGCTCCACTGAAGACATAA
Protein sequence (LotjaGi3g1v0416000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPLTHVDEKLCYQILHEYKIHNAEILFREDATVDDLIDVIEGNRKYMKCVYVYNKIDVVGIDDVDRLARQPNSVVISCNL KLNLDRLLSRMWDEMGLVRVYTKPQGQQPDFAEPVVLSADRGGCTVEDFCNHIHRSLVKDVKYVLVWGTSARHYPQHCGL AHYLNDEDVVQIVKKKERDEGGRGRFKSHSNAPARISDREKKAPLKT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 206 | 205 | 3.8E-132 | – | |
| Pfam | 2 | 97 | 96 | 1.0E-38 | ||
| PANTHER | 2 | 206 | 205 | 3.8E-132 | – | |
| SUPERFAMILY | 4 | 113 | 110 | 1.6E-11 | ||
| Gene3D | 10 | 92 | 83 | 1.6E-5 | – | |
| SUPERFAMILY | 92 | 174 | 83 | 3.92E-15 | ||
| Gene3D | 93 | 181 | 89 | 3.2E-35 | ||
| CDD | 95 | 175 | 81 | 3.04146E-47 | – | |
| ProSiteProfiles | 96 | 174 | 79 | 17.932 | – | |
| Pfam | 98 | 174 | 77 | 5.7E-24 | ||
| MobiDBLite | 176 | 207 | 32 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0416000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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