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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR012676
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We have found 22 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.698s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v1219010.1
n.a. PREDICTED: developmentally-regulated GTP-binding protein 1-like [Glycine max] gi|356516297|ref|XP_003526832.1| chr1 14820836 14828158 +
2 domain predictions
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Lj1g3v3717040.1
n.a. GTP pyrophosphokinase [Medicago truncatula] gi|357481159|ref|XP_003610865.1| chr1 42876185 42878295 +
2 domain predictions
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Lj1g3v4875630.1
n.a. PREDICTED: GTP pyrophosphokinase-like isoform X1 [Cicer arietinum] gi|502112635|ref|XP_004494394.1| chr1 59138738 59146434 -
2 domain predictions
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Lj2g3v1378840.2
n.a. PREDICTED: threonyl-tRNA synthetase, mitochondrial-like [Glycine max] gi|356497888|ref|XP_003517788.1| chr2 21766122 21774927 -
2 domain predictions
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Lj3g3v0394900.1
n.a. PREDICTED: GTP-dependent nucleic acid-binding protein engD [Glycine max] gi|356526427|ref|XP_003531819.1| chr3 3220755 3226862 +
2 domain predictions
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Lj3g3v0394900.2
n.a. PREDICTED: GTP-dependent nucleic acid-binding protein engD [Glycine max] gi|356526427|ref|XP_003531819.1| chr3 3220755 3227851 +
2 domain predictions
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Lj3g3v2634540.1
n.a. Developmentally regulated G-protein 1 isoform 1 [Theobroma cacao] gi|508779961|gb|EOY27217.1| chr3 32249702 32255838 -
2 domain predictions
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Lj6g3v1641150.1
n.a. PREDICTED: obg-like ATPase 1-like [Glycine max] gi|356555899|ref|XP_003546267.1| chr6 18508777 18516818 -
2 domain predictions
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LotjaGi1g1v0312100.1
n.a. GTPase obg; TAIR: AT4G39520.1 GTP-binding protein-like protein; Swiss-Prot: sp|Q9SVA6|DRG3_ARATH Developmentally-regulated G-protein 3; TrEMBL-Plants: tr|A0A1J7H966|A0A1J7H966_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0312100 LjG1.1_chr1 75614886 75625331 +
2 domain predictions
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LotjaGi1g1v0763000.1
n.a. GTP pyrophosphokinase; TAIR: AT4G02260.2 RELA/SPOT homolog 1; Swiss-Prot: sp|P0DKG8|RSH1L_ARATH Putative GTP diphosphokinase RSH1, chloroplastic; TrEMBL-Plants: tr|A0A0B2QGP0|A0A0B2QGP0_GLYSO GTP pyrophosphokinase; Found in the gene: LotjaGi1g1v0763000 LjG1.1_chr1 133562536 133570789 -
2 domain predictions
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LotjaGi1g1v0763000.2
n.a. GTP pyrophosphokinase; TAIR: AT4G02260.2 RELA/SPOT homolog 1; Swiss-Prot: sp|P0DKG8|RSH1L_ARATH Putative GTP diphosphokinase RSH1, chloroplastic; TrEMBL-Plants: tr|A0A0B2QGP0|A0A0B2QGP0_GLYSO GTP pyrophosphokinase; Found in the gene: LotjaGi1g1v0763000 LjG1.1_chr1 133563377 133568827 -
2 domain predictions
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LotjaGi1g1v0763000.3
n.a. GTP pyrophosphokinase; TAIR: AT4G02260.2 RELA/SPOT homolog 1; Swiss-Prot: sp|P0DKG8|RSH1L_ARATH Putative GTP diphosphokinase RSH1, chloroplastic; TrEMBL-Plants: tr|A0A0B2QGP0|A0A0B2QGP0_GLYSO GTP pyrophosphokinase; Found in the gene: LotjaGi1g1v0763000 LjG1.1_chr1 133563377 133569007 -
2 domain predictions
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LotjaGi1g1v0763000.4
n.a. GTP pyrophosphokinase; TAIR: AT4G02260.2 RELA/SPOT homolog 1; Swiss-Prot: sp|P0DKG8|RSH1L_ARATH Putative GTP diphosphokinase RSH1, chloroplastic; TrEMBL-Plants: tr|A0A0B2QGP0|A0A0B2QGP0_GLYSO GTP pyrophosphokinase; Found in the gene: LotjaGi1g1v0763000 LjG1.1_chr1 133563377 133570365 -
2 domain predictions
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LotjaGi2g1v0318100.1
n.a. Threonine--tRNA ligase; TAIR: AT5G26830.1 Threonyl-tRNA synthetase; Swiss-Prot: sp|O04630|SYTM1_ARATH Threonine--tRNA ligase, mitochondrial 1; TrEMBL-Plants: tr|A0A0S3T3W6|A0A0S3T3W6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0318100 LjG1.1_chr2 79300976 79310558 -
2 domain predictions
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LotjaGi2g1v0318100.2
n.a. Threonine--tRNA ligase; TAIR: AT5G26830.1 Threonyl-tRNA synthetase; Swiss-Prot: sp|O04630|SYTM1_ARATH Threonine--tRNA ligase, mitochondrial 1; TrEMBL-Plants: tr|A0A0S3T3W6|A0A0S3T3W6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0318100 LjG1.1_chr2 79302473 79310414 -
2 domain predictions
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LotjaGi2g1v0318100.3
n.a. Threonine--tRNA ligase; TAIR: AT5G26830.1 Threonyl-tRNA synthetase; Swiss-Prot: sp|O04630|SYTM1_ARATH Threonine--tRNA ligase, mitochondrial 1; TrEMBL-Plants: tr|A0A0S3T3W6|A0A0S3T3W6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0318100 LjG1.1_chr2 79302478 79310414 -
2 domain predictions
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LotjaGi3g1v0034900.1
n.a. Obg-like ATPase 1; TAIR: AT1G56050.1 GTP-binding protein-like protein; Swiss-Prot: sp|P37518|YCHF_BACSU Ribosome-binding ATPase YchF; TrEMBL-Plants: tr|I3SBQ5|I3SBQ5_LOTJA Obg-like ATPase 1; Found in the gene: LotjaGi3g1v0034900 LjG1.1_chr3 3707414 3714896 +
2 domain predictions
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LotjaGi3g1v0416000.1
n.a. GTPase Obg; TAIR: AT1G72660.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q9CAI1|DRG2_ARATH Developmentally-regulated G-protein 2; TrEMBL-Plants: tr|I1KHA2|I1KHA2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0416000 LjG1.1_chr3 82175605 82182465 -
2 domain predictions
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LotjaGi3g1v0416000.2
n.a. Developmentally regulated GTP binding protein; TAIR: AT1G17470.1 developmentally regulated G-protein 1; Swiss-Prot: sp|Q9LQK0|DRG1_ARATH Developmentally-regulated G-protein 1; TrEMBL-Plants: tr|I1KHA2|I1KHA2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0416000 LjG1.1_chr3 82176485 82179038 -
2 domain predictions
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LotjaGi3g1v0416000.3
n.a. GTPase Obg; TAIR: AT1G72660.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q9CAI1|DRG2_ARATH Developmentally-regulated G-protein 2; TrEMBL-Plants: tr|I1KHA2|I1KHA2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0416000 LjG1.1_chr3 82176485 82182208 -
2 domain predictions
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LotjaGi3g1v0416000.4
n.a. GTPase Obg; TAIR: AT1G72660.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q9CAI1|DRG2_ARATH Developmentally-regulated G-protein 2; TrEMBL-Plants: tr|I1KHA2|I1KHA2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0416000 LjG1.1_chr3 82176485 82182208 -
2 domain predictions
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LotjaGi6g1v0271200.1
n.a. Obg-like ATPase 1; TAIR: AT1G30580.1 GTP binding protein; Swiss-Prot: sp|Q9SA73|OLA1_ARATH Obg-like ATPase 1; TrEMBL-Plants: tr|I3T7Y1|I3T7Y1_LOTJA Obg-like ATPase 1; Found in the gene: LotjaGi6g1v0271200 LjG1.1_chr6 58540422 58548994 +
2 domain predictions
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