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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0466500 |
| Transcript ID | LotjaGi3g1v0466500.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | NEDD8-activating enzyme E1 regulatory subunit; TAIR: AT1G05180.1 NAD(P)-binding Rossmann-fold superfamily protein; Swiss-Prot: sp|P42744|AXR1_ARATH NEDD8-activating enzyme E1 regulatory subunit AXR1; TrEMBL-Plants: tr|I3SW23|I3SW23_LOTJA NEDD8-activating enzyme E1 regulatory subunit; Found in the gene: LotjaGi3g1v0466500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:88196507..88204082) extracted from Lotus japonicus Gifu genome v1.2.
ATAAGCTCTTCTCCGTGTGTTCGAAACAGCGTCAGTGTGAAGCAAGCAAGCAAAGAAGCAGCAAGTAGCGGCGAACCCAG TGAGAGCGAGAGAAGAGAAGAGAATGGCAGAACCGAAAGTGAAATACGATCGCCAACTCAGGTAACTCCCTCTCTCTCCC TCACTCCACTTCGCTCTACCCTAACTGTTTCCCCCTTAAAGCCCTAACAAATTCTCTTGTTCTTATTCTTGCTGTGTGTT TCTTAGAGCGTGTTGTCAAAATTGATTATTCATAGAATTGGCTTTGGTGAAATTGATTATGATGAAAGTGAGTTGATAGT GAAGTGATTTATATTTTTATGTGGAAAACGGTTTCTATAGGATAATGTTGTGAAATTCAGTTATGGAAACTCGTAATTGA TTATGTGCACCGCAGAAACTAGGATTTGTTGTGCAATCAGTGTTGTCATAATTGATTTTGAATATAATTGATTATTGTAA AAGTGAGTCGAAAGTGAAATGATTTATGTTTGGATATATTTTTGGGAAAAATGATTTCTATAGTGCAATGTTGTGTAATT CAGTTATGAAATCCCACAATTGATTATGTCCACTGCCGAAGCTACTCTCAATAGCTCCTCTGCAGAATTGATTTTGGGGC TGAAATCAATTATCTAATTCGATATCCAAACATCTATATAACCACTGGTTCTGGTCAATGAGAATTGATTCTAAGGTTCT CAAATGTGGAACCAAACGCACACTAGCTTCATCCAACGATTGATTTTTAAGCTAGAATGAATCATGAAAGGAAATATTTG AACACCTAAAAATTGATTATAAAATTGGAGAAGCAATTCTAACACTTATAAATATGAAACGAAACATGTTCTTAACTTGT AGGCTGTAGCCCTTTGTTGCTAAATTATGTCTCTCTCTGTGTGTGTTCTGAATTTGATGTATTCTGAGATATGACTTTGA ATTCTTATCTATCTGCTTCTCCAACTGTTACTTTTTTTTTTTGGGCTTTTGGGTAATCTTGAACACATATTTGATCTCAT GACTCATATTTACTGCAATGTTTATTTGACAATGTAGAATATGGGGCGAGCAGGGACAGGCAGCCCTTGAGAAATCTAGT ATTTGTTTACTTAACTGTGGTCCTACTGGTTCTGAAACACTTAAGAACCTTGTTCTTGGTGGGGTTGGAAGCATCACGGT AGTCGACGGGTCCAAAGTTGAAGTGGGTGACCTCGGAAACAATTTTTTGGGTACATTATCTTATTGTTGAGTTCTGGTTG TGTTTTGTGTTTGTGTGTCTCTTATAGACCTCATTTTCTCTGTTTTTTTTTTTTGTAGTGGATGAATCAAGCCTTGGGCA GTCAAAGGCAAAATGTGTATGCTCATTTCTTCAAGAGCTGAACGATGCAGTTAAAGCAAAATTTGTAGAAGAGTATCCAG AAACATTGATTGAGACAAATCCATCATTCTTTTCTCAATTTACTTTGGTTATTGCCACTCAGGTACGCTACTATAATGCT TAAAACTTCCATAAGACAGATGCTTCATTTGGAAATTTGTTGTAAAAGTATATTATGTGCCTCCATTCAAACTGCTGATG TCATAATTAATTGATGTATAACTTAATAGATCTCAACATTTCTGCATGAAAGAAACCGTTCAGTTACTAATATATCTGAA TTATTAATTTAGTTTAAAATTTGAGAAGAGCATATTTCTTTATTTATTCTTTTCATGTGCTATATCATTGACGTACTCTG TTAAACTTCCAGCTGGTGGAAAATTCAACAATAAAACTTGACCAAATCTGTAGGGAGGCGAATGTTATGTTGATCTTTGC CCGCTCCTATGGTCTTACAGGGTTTGTTCGAATTAGTTTGAAGGTAATTTGGTATGTATTTGATATTACAAGTTCAAGGA ATATTCTAGTACCTGACGAAACATAATATTGATTTTCATCACTGATGCAATTTTAATCTTGTATTTGACACGCAAAAAGA GAGAATAAAGTAAATGAATATGGCTATTTAAAAAATGTCATTAAAAAGAGCAGGGAAGTAAAGGATGGAATTGCAATAGA TTGACTATAAGATAGGCCGGTAATTTTCTTTTGCAGTCATATATATGTATGAACTAGAAAGCTCAAAAATACCTTGGTTA GAAAGAATTGTCTAGTTATTGAATATATATGATTTAGATTTGGCTGATTAGTACTTTTTGTTGGTTCTATTAGGAACATA CTGTTATTGAATCAAAGCCTGATCATTTCTTGGATGATCTCCGGTTAAATAATCCTTGGCCTGAACTCAAGAGGTATAGC ATAGTTTTGTTTTATTTTATGTTTCATTTTATTTCCTTTTTGTTCTGAGATCTGGTTTTCCCTTCATCAATTTTGCTTGT CAGCCAGCTAAATTGTTGTAGCTAAAACTATAGGCTTACTCACATTCCACTTGGTTTTCTCATTACATGTGCATCCAAAG GTTTGCAGAGGGCTTTGACTTGAATCTGCAAGATCCTGTTGCTCATAAGCACATACCATATGTTGTCATTCTCGTCAAGA TGGCTGATGAGTGGGCCAAAAGCCATGGTGGTAGGCTTCCATCGACCAGAGAAGAAAAAAAAGAATTCAAGGTTTGTTGT TTAATCGTTTAGTTGTTCTATTGATTGTTGTTCTAGTTATGTGATTAGCTTTAGATGTGAACAATGTAGGAGCTTCTTAA GGCTGGGATGGTTGCACAAGATGAAGATAATTATAAAGAAGCTATTGAGTCCTCATTCAAAGTATTTGCTCCCCGAGGAA TTAGTAAGTAGATCATTCAAGATTAATTGATTGTAACTTTTGCCTGCCTTCATTTTTAAAATCACCCTATCTTTTGTTTT CTTGTATAATGAGCAGAAGAATGTATCATCTTTTGTTAACTTGTAGGTTTAAATTTATAGGATCATTAGACAGGGTTGGG AGATGAATAAAATTGAAGACAAGTTTGAATATTTTAAATGTCAAGTATTTATAAAGGTTCTAAAAGTCTTTTTGTTTAGC CTGGCAATGAAATCTTTGTAAACCTTTCATTGAGAATTTTGTTATTTAGCCTCTGACTGTTGGCAAAACTATACTTTGCT TGCTATGGAAGAATGTATTGCCACAGACTCATGGTTAAGGGTGGGGTTTCAAGTTTTATTTTTTTTAATTAAAAAATTGT TTTCATCTAGAATGTTTAGCTATTGTGTGAAAATTTACTGCCTCAGTCCAATCAAAATTTAATGCTCTGTACTTTCTTAG GTTTGGAGTTACAGCAGATACTAAATGATAGTTCTGCTGAAGTGGACTCTAATTCATCAGACTTTTGGGTGATGGTGGCA GCTCTAAAGGTTGGTGCTTTTGATATTGCATCACTGACCTCGCTTCAGATACAGTTTGCCTCGCTTTAATGTGGAAAAAA TTCTTATGCCATTTGATATTGTAATGTTTCTTTTTGGGTGGTACTTAGAACTTGTGACATTCAAAGACTGGAGTAGTAAT AGAGAGTTGTCAAGAGCCTTTCATAATTTGGCACTGGAACTATGCTGCTCAGTTTTTGAGCTAGAGAACTATTCAAAGTT CTTGGTTGCTTGCTTATATACCTTAGTTGTTTGTTGATACATTTCTTATCATTTTGCAGGACTTCATTACAAATGAGGGT GGTGGGGAGACACCTCTTGAAGGATCTATACCAGATATGACTTCTTCTACTGAGTTAGTGGCCAAATCTTTACATGTTTT TCAGAACAGTTTATATTTTCTATGGAAAATTAAGATCACCAATTTATTTACCCTATATCTGTACTCCTGCAGGCAATATG TGAATTTGCAAAATATCTATCAGGCTAAGTCCGAGGCTGACTTTCTTGTAATAGAACGACTGGTGAAAAGCACCTTGAAG AAAATTGGTAGAGATTCAAATAGCATTCCAAGGGCAACAATTAAAAGCTTTTGCAAAAATGCAAGAAAACTCAAAGTAAG CATGTGAAGTTGCAAATCAGTTTAAATTTAAATTGTAAATAATTAACCTTCAAAAGGATTACAGTGCTTTTGGATTTTTG GGTCCAAAATAAAATTCCTTCAGCCCTCTTATTATTATTATTGTCATTATTAAACTTCTCTTCAGCCTTTTGTCTAAAAA TAGAGCAATCGCAAGACTAGAGATTTTTGCTTAGTTTTCAGTATAGATTATTTTGTAGGTTTGCAGGTACCGTTTGATTG AAGATGAGTTTAATTTTCCAAACCTGTCGGAGTTACAGAAGTACCTAACTGATGAAGATTACAGGTTATATCATTTTACA AAAAATGCTTCTCGATGATTTTTTTTAAGATTAATCCACGTAGAAGGATTTATCTTGATGAAAACCTGGTTTCCTGTTTA TATATGTGGCAGCATTGCTGTGGGAATTTATATTTTGCTTCGTGCGGTTGATCGGTTTGCTGCTAATTACAACAGTTTTC CTGGACAGTTTGACAGGTAATGCCTCAAAACTGGTGAAGGTCTATTTTTTTCCCTTTGTTTTATGGTTGGACTCATTATT GAGGTTGGTTTTTTTATATGTTGTAATTGTTTTGCAGCGCAATGGATGAGGATATATCTCGATTAAAGAGCACAGCAATT GGCCTACTTAATGACTTGGGATGCAATGGTGCCACATTGGCTGAGGACCTTATCAATGAGATGTGTCGATTTGGTGCTGC GGAGCTTCATGCTGTTGCTGCTTTGGTTGGAGGAATTGCTTCACAAGAAGTGATCAAGGTTTGCATTTCTAGCTCATGTG GAATAGTTTTGTTTGAGAGCTTTTATTTTCTTGGGCTGTTTGTTCCTATGAGATTATATTCTTTGCATGGATGTTTTATT GGATTCTTGTCTTGGTTCAGTCATTTAGATAATTAGGCCATGAAAAGTTAACACAAAAGACTCTCAGACAGCAATTAGAC ACGTAAAAAGAAGTCAACTAAACTAAACCTATTTTCTCATCTTTTGTAAGGATCCCTACGTCTTGTCCCTAGGGCATACT GGTTTAAGCCCTATCTCTATATCTGCTTAATGCCCAATTTGCTGTGCCTCAGCCCATTATTAATCCAATCACCCATTCCC ATATATATAAAACCAAAATGCTGTGTTTTTCAATAAAATTAAAATTGAGTCAACATTTCCAACTATGAGTTTTGTAGAAC TCTACAAAGTAGAAGTAGAGCCTTGGCTTAATAGTAAAATCTGCTCCGATGTGACAATGAGGTCACGGATCTTCTTTGCA AGTGCATAAAGTTGCATTTTCCTACAATAGCTCACAATAGGACTCAATGGGCTAGACCCTTCTGATAGAGCGTGTAGTAT CAATATCTTCTGGTGGAAGCTTCAAAAAAGCACCAGGTTGCCTTTTAGAAGTTCTGCGCCGCATGTGCCCAAAGTTCATA GCAGATGAAGCTTGGCTTGGAATTGTATCATGTATGTGAAGGGGAATGTTGTATTGAAAAATATTGAAGAGAAAATGGAG CGTGGGGGGAAGGGAGCCATTGCTAGGCTTTAAGATGAAGTATAAATTACCTTTATCCCACACCTCTAGTTTTCCTTAAT AGTTATCCACACACTCTTTTAACATCTGCATTGAACAATAGATGAGGGAGAGGAATCAGGTTTATCATAGAAGGACATTG GCACGAAAGAATTGAGTGTAATCTAAATTGAGGAGCTCTGCTATTTTTTTTACTTAAAATTTAAGCGTTGGCCTATGCAT TTGAATTGAGGCTCATGTTAATGGAATTGTGTAGTTACAACAATTAGCAGTATTCGGTAAAATTCTTTCAAATGAATGTG CTATGTGCAAAGAAAGGAAATTCATTTTGCTTCTGTCCTATACCTGACATTACTTATGTTCCTTGCAGCTCATAACAAGG CAATTTGTACCAATGTCCGGAACCTTCATATTCAACGGCATTGACCACAAATCACAGATATTGTCACTGTAATTGTTTTC ACTGTGGTAATACTTTAACTTTCTAGTTTGGCTCCATAACCTTGTCGCTACAGTTTTTATCCTTACATTGTAATTTATAA TGGTGCTGATGCAGCAGGGTTCTATTGGAAGATCGTCGATTTGCTGGAGTGAGCTATCATTAACTATGGCTTCCTTGTAT CTTGTAGTGCGCATTTTTGAAGCATTTCTGATCGTTAAGCAGTACTAGTACATTCTTCCTTGTATGGAAGTTTTGTAACT ACGGATGTCATGTCAGACAGCGGATTGAGGATTAGAATAGATATTACAAAACTGAAGAGACTACTTTGTTTTATGAATAC TTTTTTACCTATGTTGTACATTAAGATCTCTTAGCTGCAGCGATCAATGTAATCTCAGGGAAATCATATTATCATATAGC ACTATAATTTAGTAATGATCCATTGAATAGTAAACACATTACTTAAATTTTATCCCTAAGAAAAAAATTCTTTATTAATG TTCGAAAAGATATCATGTGAAGAATTTGCCTCAGGGATGATCCAAAGCATAGATGTCATGTTTGAAAAACAGATTGCTCC TTGTGATGTTATAATTTGATGAGAATGATTAAAGCATGGGCAAAGTCCTTCAAAGCTACTTGTCCCTCTTTCTAACTACA AAAAAATTACATGAAAATTCTCATAAATAATCAAATTAACAAAATCAGACTAAAGTACAAGCAACAAAATGAGAGGAAGT GTGGCAACTAGCAACTAGCAACTAGTAGGATCCTGCAGAGTCGCTACATACTAACAGCATCCACTCTTTTGTCAGTATTG TATACACTGAACTTGCCGAACTCCCTTCGTCCACTGGCAAAAAGTGTCCAATGTCAAAGCCTTGGTGAAAGGAATAATAA TTCAGTTGTTAAAATAAATATCAGTATCATAAGTGCACTACTAACAACCATTTGGGATGACCATCAAAAAGTAAGCAAGA AGAAAAATAAATAATTACAGCATACCTGTGTTTCACATCCCAACCACCAGGAAGAAATCGTGGATTTACAGCATCCACAA ATACTTGTCTCCATCTTTGACAAAACTCTCCAATACCCTCTTCACCAAACTCCTTCAGTAAATGTTCTACAACTAAATTC CCGTGTGGTCCATGTCCCAAGAGTGATAGTTTCGAATTATGCTTCGCTAGTGTTGATTCTTCATATTTGGAGGGATCAAA CAAGTCGCTAACTCCATTTGGTAGCGTTCTGCTCAGACTGTTATCAACATTTAAAGAGTTCCCACCTTCATTATAATCTC CATTTGAAATAGCTGCATCAACTGCAAGGTCAGAAGCTAATAAGGGGTTCCCTAGATCATCTTTTTCCATCAAAAGTTCT CCATCATGAGCATCATCATTCAATGCGTCCTCATCACCCGGAGCGCAACCAACATGATTCTCCAGTTGTGGCACTGCAGC AGTACTCTCCGTAGAATGTTTAAAAGAAAACCCCCTCTTCTTCTCGAACCGTCTTCTCTCTTGAGGAGTCATGCCAACTT GCAAAGCTCCTTCTAGATCTTCCTCAGTTATTTCTCTCCCTCCATAATATCTTTTT
CDS sequence (LotjaGi3g1v0466500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGAACCGAAAGTGAAATACGATCGCCAACTCAGAATATGGGGCGAGCAGGGACAGGCAGCCCTTGAGAAATCTAG TATTTGTTTACTTAACTGTGGTCCTACTGGTTCTGAAACACTTAAGAACCTTGTTCTTGGTGGGGTTGGAAGCATCACGG TAGTCGACGGGTCCAAAGTTGAAGTGGGTGACCTCGGAAACAATTTTTTGGTGGATGAATCAAGCCTTGGGCAGTCAAAG GCAAAATGTGTATGCTCATTTCTTCAAGAGCTGAACGATGCAGTTAAAGCAAAATTTGTAGAAGAGTATCCAGAAACATT GATTGAGACAAATCCATCATTCTTTTCTCAATTTACTTTGGTTATTGCCACTCAGCTGGTGGAAAATTCAACAATAAAAC TTGACCAAATCTGTAGGGAGGCGAATGTTATGTTGATCTTTGCCCGCTCCTATGGTCTTACAGGGTTTGTTCGAATTAGT TTGAAGGAACATACTGTTATTGAATCAAAGCCTGATCATTTCTTGGATGATCTCCGGTTAAATAATCCTTGGCCTGAACT CAAGAGGTTTGCAGAGGGCTTTGACTTGAATCTGCAAGATCCTGTTGCTCATAAGCACATACCATATGTTGTCATTCTCG TCAAGATGGCTGATGAGTGGGCCAAAAGCCATGGTGGTAGGCTTCCATCGACCAGAGAAGAAAAAAAAGAATTCAAGGAG CTTCTTAAGGCTGGGATGGTTGCACAAGATGAAGATAATTATAAAGAAGCTATTGAGTCCTCATTCAAAGTATTTGCTCC CCGAGGAATTAGTTTGGAGTTACAGCAGATACTAAATGATAGTTCTGCTGAAGTGGACTCTAATTCATCAGACTTTTGGG TGATGGTGGCAGCTCTAAAGGACTTCATTACAAATGAGGGTGGTGGGGAGACACCTCTTGAAGGATCTATACCAGATATG ACTTCTTCTACTGAGCAATATGTGAATTTGCAAAATATCTATCAGGCTAAGTCCGAGGCTGACTTTCTTGTAATAGAACG ACTGGTGAAAAGCACCTTGAAGAAAATTGGTAGAGATTCAAATAGCATTCCAAGGGCAACAATTAAAAGCTTTTGCAAAA ATGCAAGAAAACTCAAAGTTTGCAGGTACCGTTTGATTGAAGATGAGTTTAATTTTCCAAACCTGTCGGAGTTACAGAAG TACCTAACTGATGAAGATTACAGCATTGCTGTGGGAATTTATATTTTGCTTCGTGCGGTTGATCGGTTTGCTGCTAATTA CAACAGTTTTCCTGGACAGTTTGACAGCGCAATGGATGAGGATATATCTCGATTAAAGAGCACAGCAATTGGCCTACTTA ATGACTTGGGATGCAATGGTGCCACATTGGCTGAGGACCTTATCAATGAGATGTGTCGATTTGGTGCTGCGGAGCTTCAT GCTGTTGCTGCTTTGGTTGGAGGAATTGCTTCACAAGAAGTGATCAAGCTCATAACAAGGCAATTTGTACCAATGTCCGG AACCTTCATATTCAACGGCATTGACCACAAATCACAGATATTGTCACTGTAA
Protein sequence (LotjaGi3g1v0466500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAEPKVKYDRQLRIWGEQGQAALEKSSICLLNCGPTGSETLKNLVLGGVGSITVVDGSKVEVGDLGNNFLVDESSLGQSK AKCVCSFLQELNDAVKAKFVEEYPETLIETNPSFFSQFTLVIATQLVENSTIKLDQICREANVMLIFARSYGLTGFVRIS LKEHTVIESKPDHFLDDLRLNNPWPELKRFAEGFDLNLQDPVAHKHIPYVVILVKMADEWAKSHGGRLPSTREEKKEFKE LLKAGMVAQDEDNYKEAIESSFKVFAPRGISLELQQILNDSSAEVDSNSSDFWVMVAALKDFITNEGGGETPLEGSIPDM TSSTEQYVNLQNIYQAKSEADFLVIERLVKSTLKKIGRDSNSIPRATIKSFCKNARKLKVCRYRLIEDEFNFPNLSELQK YLTDEDYSIAVGIYILLRAVDRFAANYNSFPGQFDSAMDEDISRLKSTAIGLLNDLGCNGATLAEDLINEMCRFGAAELH AVAALVGGIASQEVIKLITRQFVPMSGTFIFNGIDHKSQILSL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PIRSF | 1 | 523 | 523 | 9.3E-179 | ||
| Gene3D | 2 | 263 | 262 | 2.9E-77 | – | |
| PANTHER | 3 | 523 | 521 | 3.0E-221 | – | |
| PANTHER | 3 | 523 | 521 | 3.0E-221 | – | |
| CDD | 7 | 521 | 515 | 0.0 | – | |
| SUPERFAMILY | 7 | 521 | 515 | 8.63E-138 | ||
| Pfam | 8 | 502 | 495 | 3.1E-26 | ||
| Gene3D | 351 | 523 | 173 | 2.2E-43 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Ubiquitin-like modifier activating enzyme activity | Catalysis of the activation of small proteins, such as ubiquitin or ubiquitin-like proteins, through the formation of an ATP-dependent high-energy thiolester bond. | ||
| Molecular function | NEDD8 activating enzyme activity | Catalysis of the initiation of the NEDD8 (RUB1) conjugation cascade. | ||
| Biological process | Protein neddylation | Covalent attachment of the ubiquitin-like protein NEDD8 (RUB1) to another protein. |
Expression pattern of LotjaGi3g1v0466500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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