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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0487200 |
| Transcript ID | LotjaGi3g1v0487200.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ABC transporter ATP-binding protein ARB1; TAIR: AT5G60790.1 ABC transporter family protein; Swiss-Prot: sp|Q9FJH6|AB1F_ARATH ABC transporter F family member 1; TrEMBL-Plants: tr|A0A0L9UN24|A0A0L9UN24_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0487200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:90491284..90496165) extracted from Lotus japonicus Gifu genome v1.2.
CATGATTTAAAAATTTGATACCAACTAAGAAAACTATATAAATTACTACTATACTATTTCATTCTCTTACTTTTGTTTTT CATAATGCCAACAAAACATTGATTGGTTTAGGTAACACCTAATCTCTTGCTTCCTGGTTAGAGCCCCGTCCAAAACGCAA CCACAGTGGAAGAAAGCCACGCAATCACGCACCCTTTTTCTCCAGATTCTAGAGACTACATACATATTCAAAACTCCACT CTCACCACCATCATCAACCTCCAATTCCAATTCCAATTCCCAATCCCTCTCTCCGATAAATCCATCTCCGATCATCTTCT CCTTCTGCATCGAAACCCGAGCCACGATGGTGTCCGAGGCCAGCAAGAAAAAGGCTGCACAAAAGAAGGTCGCCGCCGCC GCTAAAAGAGGCGGCAAGGCTGCTGCTGCCGCCGTAGCCCGCGCAGTTTCTGCCAAAGCTGCAGACAAAGTCGCCGACGC AGTCGCCGATATTCACATATCAGATCGCACATGCACCGGCGTCCTCTGCTCCCACCCTCTCTCCAGAGATATTAGGGTAA GTAACCGCCACAAACTCATCCATCGCTAAGAATTCATTCAGCGAGTTTTGTTTTGAATTGTATGGCAATCACTGATAACA GTTGCTAGATAGCACAAAATTGAACTCAATTGTGAAAATTAGGGTTTAATCTATATAGAACTTTCATTAATTATTGATTA AGATTTTCTTAAGCTTGATAATCATGCATGCGTTATCTAAAATGTGGTGTGAACTGTGAACTGTGAACATTAAGCTTGAT AATAACGATGCATGGGTTATAAAAAATGTGGTGTGAACTGTGAAGTAACATTGCTGGTTTAGTGAGTCTTACATTGTAGC TCATTGTTGCTAGCTTGGGTGAACGTATTTGAGCGCCTAGCCGAGCAGCTGGGTCTGTAGCATCATGGGCATTCTACCAT GTTGCCAAAGGCCAAATACTCACCTAGTACAAATTCTTTCAAGGTAGGTAACATACTAACATTGTAAGTTTGTGCTGTAA GAGGGCATTCCTACCATATCTATTATAACTAATGACTGACTGTTAATGCTGAAAATGGTAATTGTTGTATTGACGCCTTT GGTGGTTTTGTTTTTGTTGCAGATAGAGTCTCTATCAGTCACCTTCCATGGTCATGATCTTATAGTTGATTCTGAATTGG AGCTGAATTATGGAAGGTTTGTCGTTATTACGCAATTGGCGTGAATATGATGCGATAACTTTTACCTGGGGCTTTTACCG ATGTTTGCACTTGTTTTGAATTGATTTCAGGCGTTATGGTTTACTTGGATTAAATGGTTGTGGGAAGTCTACTCTGCTTA CTGCGATAGGTTGTCGAGAACTTCCAATTCCTGAGCACATGGATATTTATCACCTTACCAGGGAAATTGAAGCTTCTGAT ATGTCTGCTTTGGAAGCTGTCATAAGCTGTGATGAGGAAAGGTTGAGATTGGAGAAAGAAGCTGAAGTTTTGGCGGCACA GGTTTGTTTAATCTTTGAACTTTGAAGTAATAAAGCATCTGATTTTGTTCTCGTTTATGCTATTTGATGGCTTGCTAATT TTGTTTGAGTAATTTTGGTTCCAGGAAGATGGAGGTGGTGAAAACCTTGAACGTGTTTATGAACGATTGGAAGCTCTAGA TGCAGCAACTGCAGAAAAGCGTGCTGCTGAAATCTTACATGGTCTTGGTTTCAACAAGGAGATGCAGGCAAAGAAGACAC GTGATTTTTCTGGTGGCTGGAGAATGAGGATTGCATTGTCACGAGCTTTATTTATCAACCCAACCATTCTTCTACTTGAT GAACCAACTAATCATCTTGGTATCATCCCTGCCCTAGAAAGGAAATCTCTTATTAAATGTCTGAATAATTTTTATCACCT CATGTTCCTATGCCCTAAATTGGTTGCGAAAGTCATCTTTGCTTGGATCACTTTATATTAATGTAAAGGTTCTGTTGACG CTTTAAGTTGTCTGAGTCATATTATATCTCAAATAAAAGCATTGATAATTATTTCATCCTTTCTAACCATTTTGGAAAAT GAATGTTGCCGTGTTGGGATTTCTTCCGTATTGAATGGTATAGTAGATGTTTCACATCGTCATGTTTGATTTGGAGTCAT TAATTGTTAGGACCCCATTGCAAGGTATGGGACTTGAGTCCCACATTGGAAGTATGGGATTCTAATGTGGGGTTTATAAG GCCTTGGGCTCTCCAACTACAACAGCTAGCTTTTGTGGTGTGGTTCTCCCAAGGTTCTTATCAATGGTATCAGAGCCTTC CACCATGTCTCTGAGCTGCAAACGAGCGGCGCGGGTGGTGACGCCGGCATTGCAGTGTTCGCCCGGGACTAGTCGTGGGG CTAGTGCACAGCCAGCCCGCGTGGGCGCCGGGGCTGCGGAGCGTGGTGGGATGTTAGGACCCCATTGCAAGGTATGGGAC TTGAGTCCCACATTGGAAGTGTGGGATTCTAATGTGGGGTTTATAAGGCCTTGGGCTCTCCAACTACAACAGCTAGCTTT TGTGGTGTGGTTCTCCCAAGGTTCTTATCATTAATGCCAGACCCAATCATGCTTCTTGTTATTTATGCTTTATACTGTCT TATATCATGTTATGCAAAATTTCTCCACCCTCCTCTCGTGTCTGGTCATATGCATTATCATTTTGTTTAATGTGGGGCAT ATTTCTACTAGTGCAACTGATGCAATATTTACGAAGGTAGTTAGGCACTTCTCTTGTCATACTTTCAAATTAAATTCCAT TTACTTGTTTTGTGTGTTTCTAGTTGATATATGCGGGTTGTTCTTAACTGTTTTGTTGGTGGGTGGGGGGTGTCTACATC TTTGATCTTTGAACTTTTTTACATATTTCAATTTCTTTTAATCTGTTTGCAGATTTGGAAGCTTGTGTGTGGCTGGAGGA GAACTTGAAGAAGTTTGACCGTATTCTGGTTGTGATTTCACACTCTCAGGACTTCCTTAATGGTGTATGCACTAATATTA TCCACATGCAAAACAAAAAGCTGAAGTTCTACAGTGGTAACTACGATCAATATGTTCAGACACGTACTGAGTTGGAAGAG AATCAGATGAAGCAGTACAGGTGGGAGCAAGAGCAGATTGCCTCAATGAAGGAATATATTGCCCGATTTGGTCATGGTTC AGCAAAACTAGCTCGCCAGGCACAGAGTAAAGAGAAAACACTGGCAAAAATGGAACGAGGTGGACTTACAGAAAAGGTGG TCAAAGACAGAGTTTTGGTGTTCCGTTTTACTGATGTGGGAAAACTTCCCCCTCCTGTTCTGCAGTTTGTTCAGGTGACT TTTGGTTACTCTCCTGACAATCTCATCTACAAAAACATTGACTTTGGGGTCGACTTAGACTCTAGGGTTGCACTGGTTGG ACCCAATGGTGCTGGAAAGAGTACACTGCTGAAGTTAATGACAGGTGATTTGATTCCTAATGATGGCATGGTCCGGCGCC ATAATCATCTTCGAATTGCACAATTTCACCAGCACTTGGCTGAGAAGCTAGACTTGGAGTTGTCTGCTCTCCAGTTTATG ATGAAAGAATACCCTGGAAATGAGGAAGAGAGAATGAGGGCAGCTATTGGGAGGTTTGGGCTGTCAGGTAAAGCCCAGGT GATGCCCATGAAGAACTTGTCAGATGGGCAAAGGAGTCGAGTGATATTCGCGTGGCTAGCTTGGAGGCAGCCTCATCTGC TACTTCTGGATGAGCCAACTAATCATTTGGATATCGAGACAATCGACTCATTGGCTGAGGCATTGAATGAATGGGACGGT GGCATGGTGCTTGTTAGCCATGATTTTAGGCTCATAAACCAGGTGGCCCATGAGATATGGGTGTGTGCTGATCAAACTGT GACCCGCTGGGACGGTGACATTATGGCTTTCAAGGAGCATCTAAGGTCAAAGGCAGGTTTATCTGACTGAAGCTGATTGG GGCTTATGCAGATAATGTGACATTGGCTTTGTCCTATATATCTTAGAACTTATTGGGGAGTGCTGCCATTTTGAGTTGGA TTTCTCTCAACCGTGATGATTGTTCAGTTCAATTGCAGGATTGGTGCAGACAGATAAGCTACCAGCTAGTTATGATGTTT GTTAAGCCGAGAGATCTTTTTGACACGCAGACCTGTTAGACTGGCAAAGACTTTCTCTTGATTATCAGTTATTGTGCCTA TCATTTGATTGCTTGGTTGTTGACCAGCATGATGGATAAAATGGGACATCAATCACCTTCTGGTAGAGGTGATCCCTATC TCAAATCTATGATCAGACTTGATCTATAATGATGTATTAATGATATATTGTACTGAGAATATTATGTTTGTGGTATTAGT ATTTAGTAGCAACTATAAGTTTCTTCACTGGGTTATTTCTTCCTAATTTCTCTTCATTAGTCATCTAACCTTTGCCATTT TACTTTCTTCCACTCTCGTTAAAGGGAAAGATAACGAGTACAGCCTTTTCCTTTGTGTGTCACAAATTGCAGTAAGAAGG TGGCCAAATGAGGAAATCACCCAAGTACTTGGAGTGGCTCTCCATAGCCTTTATGTGCATCTATCTTTGGATAAAAGTCT GTATGAACAGATAGGGAGAGACGGGATCTCCCAGTCTCAATCATACTTGGGGTAGAGTTTTTCACATGGGGAGCCATTAA GGAGGGGTGGATAAGGTTATAGATGAAACACCTATAATCTGAGACTAAAGAAGTGTTTAGGTTCAAGTTATGTATTGTAT TTTGGTGTTCTTGGAATTAAGTAAAAGAACACCCAGATTAAGCTTTGAGTAAACAATAATCAACCATTTATTTAATTTGA GG
CDS sequence (LotjaGi3g1v0487200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTGCCAAAGGCCAAATACTCACCTAGTACAAATTCTTTCAAGATAGAGTCTCTATCAGTCACCTTCCATGGTCATGA TCTTATAGTTGATTCTGAATTGGAGCTGAATTATGGAAGGCGTTATGGTTTACTTGGATTAAATGGTTGTGGGAAGTCTA CTCTGCTTACTGCGATAGGTTGTCGAGAACTTCCAATTCCTGAGCACATGGATATTTATCACCTTACCAGGGAAATTGAA GCTTCTGATATGTCTGCTTTGGAAGCTGTCATAAGCTGTGATGAGGAAAGGTTGAGATTGGAGAAAGAAGCTGAAGTTTT GGCGGCACAGGAAGATGGAGGTGGTGAAAACCTTGAACGTGTTTATGAACGATTGGAAGCTCTAGATGCAGCAACTGCAG AAAAGCGTGCTGCTGAAATCTTACATGGTCTTGGTTTCAACAAGGAGATGCAGGCAAAGAAGACACGTGATTTTTCTGGT GGCTGGAGAATGAGGATTGCATTGTCACGAGCTTTATTTATCAACCCAACCATTCTTCTACTTGATGAACCAACTAATCA TCTTGATTTGGAAGCTTGTGTGTGGCTGGAGGAGAACTTGAAGAAGTTTGACCGTATTCTGGTTGTGATTTCACACTCTC AGGACTTCCTTAATGGTGTATGCACTAATATTATCCACATGCAAAACAAAAAGCTGAAGTTCTACAGTGGTAACTACGAT CAATATGTTCAGACACGTACTGAGTTGGAAGAGAATCAGATGAAGCAGTACAGGTGGGAGCAAGAGCAGATTGCCTCAAT GAAGGAATATATTGCCCGATTTGGTCATGGTTCAGCAAAACTAGCTCGCCAGGCACAGAGTAAAGAGAAAACACTGGCAA AAATGGAACGAGGTGGACTTACAGAAAAGGTGGTCAAAGACAGAGTTTTGGTGTTCCGTTTTACTGATGTGGGAAAACTT CCCCCTCCTGTTCTGCAGTTTGTTCAGGTGACTTTTGGTTACTCTCCTGACAATCTCATCTACAAAAACATTGACTTTGG GGTCGACTTAGACTCTAGGGTTGCACTGGTTGGACCCAATGGTGCTGGAAAGAGTACACTGCTGAAGTTAATGACAGGTG ATTTGATTCCTAATGATGGCATGGTCCGGCGCCATAATCATCTTCGAATTGCACAATTTCACCAGCACTTGGCTGAGAAG CTAGACTTGGAGTTGTCTGCTCTCCAGTTTATGATGAAAGAATACCCTGGAAATGAGGAAGAGAGAATGAGGGCAGCTAT TGGGAGGTTTGGGCTGTCAGGTAAAGCCCAGGTGATGCCCATGAAGAACTTGTCAGATGGGCAAAGGAGTCGAGTGATAT TCGCGTGGCTAGCTTGGAGGCAGCCTCATCTGCTACTTCTGGATGAGCCAACTAATCATTTGGATATCGAGACAATCGAC TCATTGGCTGAGGCATTGAATGAATGGGACGGTGGCATGGTGCTTGTTAGCCATGATTTTAGGCTCATAAACCAGGTGGC CCATGAGATATGGGTGTGTGCTGATCAAACTGTGACCCGCTGGGACGGTGACATTATGGCTTTCAAGGAGCATCTAAGGT CAAAGGCAGGTTTATCTGACTGA
Protein sequence (LotjaGi3g1v0487200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLPKAKYSPSTNSFKIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGCRELPIPEHMDIYHLTREIE ASDMSALEAVISCDEERLRLEKEAEVLAAQEDGGGENLERVYERLEALDAATAEKRAAEILHGLGFNKEMQAKKTRDFSG GWRMRIALSRALFINPTILLLDEPTNHLDLEACVWLEENLKKFDRILVVISHSQDFLNGVCTNIIHMQNKKLKFYSGNYD QYVQTRTELEENQMKQYRWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVVKDRVLVFRFTDVGKL PPPVLQFVQVTFGYSPDNLIYKNIDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLIPNDGMVRRHNHLRIAQFHQHLAEK LDLELSALQFMMKEYPGNEEERMRAAIGRFGLSGKAQVMPMKNLSDGQRSRVIFAWLAWRQPHLLLLDEPTNHLDIETID SLAEALNEWDGGMVLVSHDFRLINQVAHEIWVCADQTVTRWDGDIMAFKEHLRSKAGLSD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 2 | 267 | 266 | 7.8E-51 | – | |
| PANTHER | 10 | 540 | 531 | 0.0 | – | |
| PANTHER | 10 | 540 | 531 | 0.0 | – | |
| SUPERFAMILY | 11 | 258 | 248 | 1.63E-39 | ||
| ProSiteProfiles | 14 | 254 | 241 | 14.853 | ||
| CDD | 15 | 231 | 217 | 6.39057E-44 | – | |
| Pfam | 32 | 186 | 155 | 1.3E-21 | ||
| SMART | 38 | 231 | 194 | 2.0E-6 | ||
| ProSitePatterns | 158 | 172 | 15 | - | ||
| Pfam | 225 | 297 | 73 | 1.3E-22 | ||
| Gene3D | 289 | 538 | 250 | 1.9E-51 | – | |
| SUPERFAMILY | 308 | 520 | 213 | 8.56E-42 | ||
| CDD | 325 | 517 | 193 | 5.9519E-53 | – | |
| ProSiteProfiles | 325 | 540 | 216 | 15.06 | ||
| Pfam | 341 | 472 | 132 | 4.3E-23 | ||
| SMART | 350 | 538 | 189 | 2.2E-5 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. |
Expression pattern of LotjaGi3g1v0487200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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