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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0489200 |
| Transcript ID | LotjaGi3g1v0489200.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like kinase; TAIR: AT2G28250.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q8VYY5|NCRK_ARATH Receptor-like serine/threonine-protein kinase NCRK; TrEMBL-Plants: tr|A0A151TNC6|A0A151TNC6_CAJCA Serine/threonine-protein kinase PBS1; Found in the gene: LotjaGi3g1v0489200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:90708333..90715696) extracted from Lotus japonicus Gifu genome v1.2.
GCCACCTTAGAGAGCTTGCCTCATAAATCTCTACCTGAACTACAGTGCCTCATAAATCTCTCTTCTCTTGTGACTTCATC ACGCTCTCCTTCATCTTCTTCAGCTCCCCCTTCCATTTCCATTCTTCTCATCAACACTTCCACTGAGGTTTTCACCTTTC TATTTCCTCCTAACACCCCAACATTGTATTTCACAAGTTCAAGTCAAGTAGCAGATCTAAACGACCCTGCATTGAATTTG AGGTATGCTCTCTTTCCTAGTTTTCAAAAACAGGTGGAGGTGGCATTGTTGTTTAGACCCCATTCCCCACCTAAGTTTAT CTTTTTCATTGAAAAAAGTTAATTGGATGGTGTTGTGTTAGACATGATTAAGGATAGAATAACATGATTTGATTACTAGT TTGTTGGATTAGTATTATGTTTTCAAACATCTTCAAAGTCACCGCTGATTAAGATTGTTCTTTTGTCTAATCATCTTGTG GAAAATGCTAATTGATGTACTAATTGCTAAAGCTCTCAGAGGCCCCCCATAATGAAACAAAAACCCCACACCGACAAAGG AGAAGGTCATCATGGCCCACATTTTAAATAAAACCAACTCAACAAGTTGAAAAAAATCTCCTTTACTATTTTCTGAACCA TATAGTATATGACTTTCAAGCTAAGTTAAATGATTTATACACATAACAAAAATGTACCTGCATTATTTTTTTTTTCTCTT CTTGTCTCATTCCCACATCTTCTCATTCAAGAAATGACAAAGCAATGCTTTATCTTTTTAGCCGTTAGCAATACCATATA ATGTATCCTATTCTTTTAAAGCAAGTAAAATTTGGTGCTTGATGGTTGAAAGTTGAAACAAGCTTTATTCTATTCCCTAG CTTATCATTGATGTTTGTAAATAAAGGTTGTACTTATTGTCACCTAAGTAAGTTTTATTTTTTCCAAAAACAAATGGTTT TTGTCATGAGTAAATGATGATTCAGTAATTCAGTGTATTGAGTATAGTGAAAAATGGTTTATTTTGGATAGAATAGATAG ATAGAAGGGAAGATGAGGGGTTGTTTTCAGTTAGAGAAGGGGTTACTTTCAGAGAGGTGGTGGTCTTGATGGTTTTTTCT TCAAGCCTTTTTTCAACTCTATATGTTTATGTTGATTTTATGGAATAGACTCATTGGGAAGGGTCTCTATCCTTCTTCAC TGCTTGTTTGCCATTTGTCTGTTTAATTTACTTCTGATTGCTCTTTCTGATAATGAAGCCTGGAGGTTGGTAAACATGGG GTTCACATTGCTCTAATGCACTGCTTTCTAGCTTTGTTTTAGTTTTGTGAATTAGTTTCTTTCCAAAACAGGAAACTTTG CAAAACTTCTTAATTGGATTAGTCTTTGCTTTCTCAAGTGCTCAAAATAGCTTCCTTTCTTTGTTACTTTTTTTGCTGGT TTGACTTAGATTGCACAGGTTCTGATTGTACAATACTTCAAAACACAGTTCATTTTTGCACCTCATTCTCCAAAGCTTTG AAGAATTGTAGGTGGAAAATATGATGGTTTCTTTTTGGTAGTTGATGGCTTCATTCATTTCCATTCATAGAATTTGCATA CAATTTTTGAAGCTATTTCTCGAGCCAACCCCTCAAGGGAGTTCTACCTGTTCGCTGACTATATTTATTGTCTGATTTAA GATGTAACTATACCCTCGGTCCATCTTGTTTGCTTTAATTGAACATTTATGCAAATGGGTAGTTGACTTGTAATTTGAGT CCTTTCCACTCTCACCCAGTGCTGGAATACTGGACCATCTAGGCTCTAGCTACTATCTGATCTACTACATGTTCAAGCTT TCAATGCTTATGTATACAGTGCTTTATGTTTGTCTTAGTACTTGGTAGTTGGTACTGAGGATGGATAACCTACACTCTGT GATGTTTGTTGGCCAACTGAGTATTTCTTCCTACTACTTTCAATTTACCTTATTTACAATACATACACAGGCCAGAAAAT TTTGGATAGAGAAGAGATTTCCTAACCCCTTATTATGAAATGATTGGTATCCATTCACTTGTTGCAGCATAAGATTGAAA CTGAATGGGGGGGGGGGGTTTGAATTTTGGGTGTGTGCAGCTTGTACTTTTGTTGGATTAGCTTATCTCATGGATCATTT TACCTTTTTTTTTCTACAGATGTTGATTAGATGAGACATTTGAAGGCTAGCCCTGTTCTTCTTAAGACAGGTTTCTAACC ATCTCACCATCTCTCTCCTTCTCTCTCTCACACACACAATAGCTTCATGTTGCTCATCAACTATGCAGGATTTAATTTTG GTTTGCTTATGAATTTATTGTCTTGGAAAATAATCTATATGCTTTTTTGCAACACATGAGGAACTTTTTGTCCAATTACT TGTGTAGCACTAAATGGTTTCCCTTCTTTTACCTGTAGTGTATGGGTTGAGTAAATGAAGTCACAGCTCAAAATTGCTCT TGCTTTTGTCATTAGCTTGCTCTGGATTCAGCACTCATATTGTGGTTAGTATCTCAGTTTATTTGGAAAACCTTTAGTAA TTGGCTCTCCAATTGTTTCCAATGACATACCTATGCTTTGAAATTTAGGTGCTTGATTGTTTAAATTAGAAATACGAAAG CTAGCAGCTTTTGATATGTTAGCCATCTGTGGACACTAAATTCGTGCAACATTAAATAAGTTATTTAGGTTTTTTGCTCT GGATTCAGAACTCAGTTAATTTTGTGGCTGTATCAAAATTTCTCAAGCATTTGGTGTTTGACATCTAATACTTGTCAGTA GTGTATACTGATGTTTAGTTGTTTCCTGGTTAAATAAAAAATATGATGGAACAGCTGCATTTGATATATGGGGCATTGCA TGGACACTTGATTCCTATAACATGAAATAAGTCATATGGAGTTTAAGTCCAATGTTTTGGAGTTCCATGTTTTATATGTT CATCTCAGTGATAGGTAAGTCGAAATTAACCATAAATCTTTTTCTTCTTTTCCCTCCTTTGGGTGGCATTGTTTCTTGGC AGATGAAGCTTCTGATACATCTGGCCTGAACAAGTGGAAATGTAAATGTTCTTCTTTCCAAGGGAACCAGAACTATTCTC TTGCTAATTGCTCTAAGTCATGTGATTGCCGTTCAGGTATGCTGTTAGTTACTCTTTTTATTGGAATAATGAATACTAGG AGCCTCCTTCTGATATGTCTTTTGTATTCTTATATTGATTATTTAGCTTGAGCTTTGCCTTTATGTATGTTTGCTTGGGG CATTGCCTGGTAACTAGAATTGTTGTAACCTCATAAAAGTTGCTTTTATGATAGATTTCAAATTATTTTGATTCAAAGCG CAACACACCGAGGAGTAGCAAAAAATGACTGGATATAAATAGGTGTAGGTCAAATTCAACCCTCAAAATATTCTGTTGTA GGATTGAAGTTTAACCATTGACCCTAACACGCAGCTGTCTAAACTAAATTTTTATATTTTTTTGTCAACTTGTGGTTACT AACCAACACATCTATGGTAAGAATGGAATATATTTTTTGTCTTAGGTGAAATGAGGAGATCCTAACTTGAATAGTATATG ATAACTGCTTTACCTTCCATGTAGGTGGTGACAAAAATGAGTCCATATGGACATGCATATGTGATCCCAATGGCTTTCCC CAAGTTGCAGCAGATGGTCGTAGCCCTAATTGCTTTCATTCCTGCAACTGTACCTGGGGTATCTTCCCCTCTTTCTCACT CTCTCTCTTGCTCTAATCCAAAATTTCTATCTTGAAAATTACATTAACTATTGCTTCCTGAAAGCTGATTTAGATAGACT AGACCAGTTATTATTGTTCACCAAACCTTGATACATATTTACATACCAAGATTTGTTTCTTGGATACAACTCTTATTCAT GGATATTTAAAACTTTTTTCAATAACAAGTCACTTCATATTTTGTAGTGTTAGGGAGAGTCACGGCGAGGACCCATGGAG CAAGGCCAGGGGGAAACACCAAGGAGAACTTGGACACCACATCTTAACCCAAAACCTTAAGGCGCGTCGATATCTCTTGG TGTCTTGCTCCTCGGCCCATGGGCTCCCCTGTCTCCCCCAACATGTAGTCTGTACTGTGAAGTGTGAAGATTTGTTTTCT TTCAATTTTCCCTCTTGTTAGCGTATATGTGTCTTAGAGATAGTGACATAACCTACTACACTTTCATACAAAATCATTGG TTTATTCTTAGATCAAGGTAATCAAACTGAGTTTATTATTTTTGGCTGCTCTGCAGGAACTGTCAGCACATTACTAGGTT CAAAGAAACACATTTCCACCAAGATTGCTGTAGTCATTCTATTAGCCTGTGTTCTATGTACAACAATTGCATTTCTTGCC TTGGTTTTGTACTATGTCTACCGAAGAGACAGATTCCATATTCAATCACCAATATTCTCATCAGATAAGGAAACAAGTAG TGGTATTAGTACTGCCAACCTAATTAGTCATAGGACAGCGACTTCTTCAGTGCCGGAAACCAAATTTTCTGTAAATTCTC CTATTTTTCATATTACAGGTAAGTTGATTTTTTACTCACTGCTCCTTGATTCATACTTCTTACTGAGAAGTGTATCTTTT TACCAGTTTGTATGATTGTATTTGTATGTGCAAACTCCAAAGTTCTTCTGTTAATTTGCCATTATTTATTAGTTTTTAAT TACCATTTCTTTTATGTAGGATGCTTTCAGAAAGCCTCTTTCTTATTTGGGAACCAAAAAGAAACTTATCATGGAAATAT TATTCAATTTTCGTTTGCTGAACTGGAAAGTGCCACTGAGAACTTTTCAGCTTCCAACCTTATCGGATTAGGCGGAAGTA GTTATGTATACCATGGTCTGCTGAAAGATGGTAGTGATGTCGCAGTTAAGCGCCTAAAAGATCATGGGGGGCCAGAAGCA GACTCATCATTTTTTAAGGAGGTGGTACCTAATCTTAGAATATCAGCATTCTTTGGCTAGTCATTAGTCATGCTATGTTA TCATATTCCATAGTATCCACATATAAGATGAAGTGATAAACCTAACTTTTTTTATTGCTGTACAGAATTCATAGTGATTA ATGAGGTTTTTGTTTCTGCAGATTGAACTATTATCTAGACTTCATCATTGCCATTTGGTGCCTTTGCTTGGATACTGCTC AGAGTTAACAGGAAAACATGTTCAGAGGCTGCTAGTGTTTGATTACATGACGAATGGGAATTTGAGGGAATGTTTAGATG GAGTTTCTGGGAAATATTTGGATTGGGCTACTCGTGTTATGATTGCGATAGGAGCTGCGAGGGGCTTGGAATATCTACAT GAAGCAGCTGCTCCAAAAATTCTTCATAGAGATGTCAAATCAACTAACATTCTTCTGGATGAAAACTGGCAAGCAAAAGT ATGAATCTTGTTTATTCTGGATAGTAGTAACAAATCATGAATTACTCAAGAGATAATATACATGGATACTCATAGAACTT CATGTGAGCTTGGCTTATGATACAAGTTGAATAAGATACTTAAAGCCAATGCATAGTAGTGGTTTTGAAGTGAAATTCTT TATTGACTTACTTTAGAATTTCTCTTATAAGTCTGCTTGAGTTTTAATTATTATACCTTAGGTTGTAGTTGTCACTTTTA ACAAAAATTTATACTTCTATAATTTTGTTAACTAATGAACTTGCAGATAATTGATCTTGGTATGGCTAAAAACTTGAGAT CTGATGATCTACCCAGCTGTTCAAATTCTCCAGCAAGAATGCAGGGGACATTTGGTTATTTTGCACCTGAATATGCTATT GTTGGTAGAGCCTCTCTTGAGTCAGATGTCTTCAGTTTTGGGGTGGTTCTTCTTGAGCTTATCAGCGGTCGGCAACCTAT CCATAAAACAACTTCCGGAAAAGAAGAAAGCCTCGTTATATGGGTATTTTAAATTATCCTCATAATCATAACATTAACCT GAATTTACAATTGTATGTATGAGGAATATCTTTGATGTGCTCAAACTGGTACTCAGTCTCCCTTTTCCTTCGATCATTAT TTCTTTTACAACCATATAATACTTTTCATCTTCCATTAATAATTCTGAATTAGAATGATATGGTTTACTGGTAACTATCT GCTTCATTATGACCTTGTTGCACATCTTACTATTGAATTCAACTAGGAAATACTATGGACTATGGACACCTAATTATTGA TATAATTTTTTTTTCTAGGCTACTCCGCGCTTACAGGATAGTAGGCGCGTAATGGCGGAGTTGGTTGATCCACAATTGAA AGGAAACTTCCCAGAAGAAGAGGTGCAAATAATGGCATACTTAGCAAAAGAGTGTTTGCTGCTGGATCCTGACACTCGGC CAACGATGAGTGAGGTGGTTCAGATTCTTACAAGTATTTCCCCAGACAAATCTAGAAGGAGAAGAAACATTCCAGCAAGC CTGTTTCAGGTATGTATTCAGTTCTCAACTGCAGTGTTTCTGGTTTATTAAGGTTTGTTATTTTTTCCAACTATGAAATT TGGATGAATATTTTACTTGCCTGATTGATACACCAATCACCATCATTGATCATTCTCCTTTTGCATAAAAAATAAACCAT CTGCTGATTTTTTTTTTCTTTATGGACATTTGAAGGAACCAGAAGATGCAGAAAAGCAAAGGCAAGCTCCATGCAGTAAA TTTCCGACTCATACTTCATTATCCCATGGTGTTGATCACACACTTTGTGTTGAGAACCAAAATAAAGAAACAGATACAGT TTCAGCTGAGTATATTGAGAGTTTGATCCTCTTGTCTTCACAATATGATGGCTTGCATGCATCAGAAGAGGAAATGGTAG ACCTCACTGAGCCGCGGTATGAATCATTTTGCATGACAAATGCCAATGTCCCTTGAAACAGCTCTGTTGCTAGTACTACC AGTTATAGTGCATAACTGCATGTGATATCATAGGGGATTCGGCAATCTGGTTCTGAAATTATGTACTTTTGTTTTCACTT TTGTTTTGAAAGGAAGAGCACATAGGTGTTATTAGATGTATTCTTTATATTCTTGTACAGAAAAGCATAGGATGGTAGGA GATTCTGGTTCTTCTTTATTTGGAGAAAAATCAGGTGACATACATATTATATTTGGTTGTATAAATGACTGTTTTACAAT TATATATATAGGGATTTAACTCATTTGACGTGAAAAGTGAGGGAGTCATTTTAGAAGATAAAATTAACAATCATGAAAAA TTAACAATTGAGATTTAAATAATAATAGTTGGGGTTTGCTAACTGTTGCCGCACCTGAGCCCCTACCATCGTGTTGCAAC CTCT
CDS sequence (LotjaGi3g1v0489200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGTCACAGCTCAAAATTGCTCTTGCTTTTGTCATTAGCTTGCTCTGGATTCAGCACTCATATTGTGATGAAGCTTC TGATACATCTGGCCTGAACAAGTGGAAATGTAAATGTTCTTCTTTCCAAGGGAACCAGAACTATTCTCTTGCTAATTGCT CTAAGTCATGTGATTGCCGTTCAGGTGGTGACAAAAATGAGTCCATATGGACATGCATATGTGATCCCAATGGCTTTCCC CAAGTTGCAGCAGATGGTCGTAGCCCTAATTGCTTTCATTCCTGCAACTGTACCTGGGGAACTGTCAGCACATTACTAGG TTCAAAGAAACACATTTCCACCAAGATTGCTGTAGTCATTCTATTAGCCTGTGTTCTATGTACAACAATTGCATTTCTTG CCTTGGTTTTGTACTATGTCTACCGAAGAGACAGATTCCATATTCAATCACCAATATTCTCATCAGATAAGGAAACAAGT AGTGGTATTAGTACTGCCAACCTAATTAGTCATAGGACAGCGACTTCTTCAGTGCCGGAAACCAAATTTTCTGTAAATTC TCCTATTTTTCATATTACAGGATGCTTTCAGAAAGCCTCTTTCTTATTTGGGAACCAAAAAGAAACTTATCATGGAAATA TTATTCAATTTTCGTTTGCTGAACTGGAAAGTGCCACTGAGAACTTTTCAGCTTCCAACCTTATCGGATTAGGCGGAAGT AGTTATGTATACCATGGTCTGCTGAAAGATGGTAGTGATGTCGCAGTTAAGCGCCTAAAAGATCATGGGGGGCCAGAAGC AGACTCATCATTTTTTAAGGAGATTGAACTATTATCTAGACTTCATCATTGCCATTTGGTGCCTTTGCTTGGATACTGCT CAGAGTTAACAGGAAAACATGTTCAGAGGCTGCTAGTGTTTGATTACATGACGAATGGGAATTTGAGGGAATGTTTAGAT GGAGTTTCTGGGAAATATTTGGATTGGGCTACTCGTGTTATGATTGCGATAGGAGCTGCGAGGGGCTTGGAATATCTACA TGAAGCAGCTGCTCCAAAAATTCTTCATAGAGATGTCAAATCAACTAACATTCTTCTGGATGAAAACTGGCAAGCAAAAA TAATTGATCTTGGTATGGCTAAAAACTTGAGATCTGATGATCTACCCAGCTGTTCAAATTCTCCAGCAAGAATGCAGGGG ACATTTGGTTATTTTGCACCTGAATATGCTATTGTTGGTAGAGCCTCTCTTGAGTCAGATGTCTTCAGTTTTGGGGTGGT TCTTCTTGAGCTTATCAGCGGTCGGCAACCTATCCATAAAACAACTTCCGGAAAAGAAGAAAGCCTCGTTATATGGGCTA CTCCGCGCTTACAGGATAGTAGGCGCGTAATGGCGGAGTTGGTTGATCCACAATTGAAAGGAAACTTCCCAGAAGAAGAG GTGCAAATAATGGCATACTTAGCAAAAGAGTGTTTGCTGCTGGATCCTGACACTCGGCCAACGATGAGTGAGGTGGTTCA GATTCTTACAAGTATTTCCCCAGACAAATCTAGAAGGAGAAGAAACATTCCAGCAAGCCTGTTTCAGGAACCAGAAGATG CAGAAAAGCAAAGGCAAGCTCCATGCAGTAAATTTCCGACTCATACTTCATTATCCCATGGTGTTGATCACACACTTTGT GTTGAGAACCAAAATAAAGAAACAGATACAGTTTCAGCTGAGTATATTGAGAGTTTGATCCTCTTGTCTTCACAATATGA TGGCTTGCATGCATCAGAAGAGGAAATGGTAGACCTCACTGAGCCGCGGTATGAATCATTTTGCATGACAAATGCCAATG TCCCTTGA
Protein sequence (LotjaGi3g1v0489200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKSQLKIALAFVISLLWIQHSYCDEASDTSGLNKWKCKCSSFQGNQNYSLANCSKSCDCRSGGDKNESIWTCICDPNGFP QVAADGRSPNCFHSCNCTWGTVSTLLGSKKHISTKIAVVILLACVLCTTIAFLALVLYYVYRRDRFHIQSPIFSSDKETS SGISTANLISHRTATSSVPETKFSVNSPIFHITGCFQKASFLFGNQKETYHGNIIQFSFAELESATENFSASNLIGLGGS SYVYHGLLKDGSDVAVKRLKDHGGPEADSSFFKEIELLSRLHHCHLVPLLGYCSELTGKHVQRLLVFDYMTNGNLRECLD GVSGKYLDWATRVMIAIGAARGLEYLHEAAAPKILHRDVKSTNILLDENWQAKIIDLGMAKNLRSDDLPSCSNSPARMQG TFGYFAPEYAIVGRASLESDVFSFGVVLLELISGRQPIHKTTSGKEESLVIWATPRLQDSRRVMAELVDPQLKGNFPEEE VQIMAYLAKECLLLDPDTRPTMSEVVQILTSISPDKSRRRRNIPASLFQEPEDAEKQRQAPCSKFPTHTSLSHGVDHTLC VENQNKETDTVSAEYIESLILLSSQYDGLHASEEEMVDLTEPRYESFCMTNANVP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_NEGATIVE | 1 | 23 | 23 | - | – | |
| SignalP_EUK | 1 | 23 | 23 | - | – | |
| Phobius | 1 | 23 | 23 | - | – | |
| Phobius | 1 | 6 | 6 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 26 | 26 | - | – | |
| Phobius | 7 | 18 | 12 | - | – | |
| PANTHER | 17 | 553 | 537 | 1.6E-229 | – | |
| PANTHER | 17 | 553 | 537 | 1.6E-229 | – | |
| Phobius | 19 | 23 | 5 | - | – | |
| Phobius | 24 | 115 | 92 | - | – | |
| Phobius | 116 | 141 | 26 | - | – | |
| TMHMM | 118 | 140 | 23 | - | – | |
| Phobius | 142 | 615 | 474 | - | – | |
| Gene3D | 193 | 309 | 117 | 4.5E-28 | – | |
| SUPERFAMILY | 210 | 509 | 300 | 5.06E-73 | ||
| SMART | 229 | 508 | 280 | 1.9E-28 | ||
| ProSiteProfiles | 229 | 512 | 284 | 35.425 | ||
| Pfam | 231 | 507 | 277 | 3.2E-42 | ||
| CDD | 235 | 512 | 278 | 4.72026E-89 | – | |
| ProSitePatterns | 235 | 257 | 23 | - | ||
| Gene3D | 310 | 529 | 220 | 1.1E-56 | – | |
| ProSitePatterns | 354 | 366 | 13 | - | ||
| MobiDBLite | 517 | 537 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi3g1v0489200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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