Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0492000 |
| Transcript ID | LotjaGi3g1v0492000.4 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase family protein; TAIR: AT5G59010.2 kinase with tetratricopeptide repeat domain-containing protein; Swiss-Prot: sp|B9FDE0|BSK3_ORYSJ Probable serine/threonine-protein kinase BSK3; TrEMBL-Plants: tr|A0A0L9T6M7|A0A0L9T6M7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0492000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:90974646..90977838) extracted from Lotus japonicus Gifu genome v1.2.
AGTGAACGATTAGCTAACTTGGTTGGGTGTTGCTGTGAAGGAGAAGAGAGATTGCTTGTTGCTGAGTTCATGCCCTATGA AACTCTCTCAAGACATCTTTTTCATTGTAAGTTCTCATTCATTTGGTTTTCAATCTTACATTTTTCAGCAATCCATTGAA GAAAATATCTAATTTTGAAGTCTCTTTTGTTTGACAAGGATAAGGCATTTTGCTTTATAAGCTATATTAGGTGCCAAATT TAAGTAATCTACTCCTAGTAGCTTTTGTGGCAGTACAATTGATTCTTGATTCTGGAAGATCTGAATGTGAATCCAAACAT GCTAATAGTTTGTGAAGCATTATCATTTATCTCTATGTAAACCCCTGATTTTGTGATTTGTGTGAAATGCTCTGGCAGGG GAGACCCAGCCGATGAAATGGGCAATGAGGCTGAGGGTGGCCTTGTATTTAGCACAAGCTTTGGAATACTGCAGCATTAA AGGAAGAGCATTGTACCATGATCTTAATGCTTACAGAATTTTGTTTGATCAGGTACTTCAGCTTTCATAACCTGGCTTTT TGCCTCTTTTAACTTTTTTTTTTCAACAATCTCTTATGTGGTATCAATGGTGGGCAGGATGGCAACCCTAGACTCTCTTG TTTTGGACTCATGAAAAATAGTAGAGATGGCAGAAGCTATAGCACAAATTTAGCCTTCACTCCTCCAGAGTACTTAAGGA ATGGTAATAGTTGATTTAAGATCAAAAAAAGTATATGCTAACGTGCTTGAACTCCACGTAAGCTACAATATTGAGCTTCT CTTCTAACGTGCTTTGGAGTGTGTGTCCAACACACATCCAAACATACTCATTGTCTTAACTGAGCTAACACCTGTTTGAA ATTTGGCAGGAAGAATCACCGCCGAAAGCGTAGTTTACAGTTTTGGAACCCTGCTGCTTGATCTTCTTAGTGGAAAGCAT ATCCCACCCAGTCATGTATACTCCCTCCTTCCCATTTCATGACTTCTTATTTTAATTTTAGGTGGTGTTTTGTTCAGTAA ATTTTTTACTTGTCAAATATTGGTACTTTAGATGATTTAAGTAACATCCTATGATGGTTTTGCTTAAAATGATCATCGCA TTTATAGAGTTGATCCTTGTTCCCTTCACTTCACATACAGGCGCTTGACCTTATACGAGGCAAGAACTTTCTGATGCTGA TGGACTCAGGTTTGGAAGGTCATTTTTCAAATGATGATGGAACTGAGTTAGTGAGATTAGCTTCACGTTGTTTACAATAC GAGCCTCGTGAGAGACCAAATACTAAAACGCTTGTGACAGCTCTAACCCCTCTTCAAAAAGAAACCTCAGTATGCTCTTC CTATTCGCTTTCTCTCTGCTTTTGGGAACCATAGAAACATATTTGGTATTTGGCTTACCATTTGTGGTATTTCACAGGTA CCTTCATCTGTTTTATTGGGCATACCAGATGGGAGTCTATCACCAAAGGAAACAATTTCATTAACACCTTTTGGTGAAGC TTGTTCAAGAAGAGATCTAACTGAAATACATGAAATTTTGGAAAAGGTGGGTTATAAGGATGATGAAGATGTTGCAAATG AGGTAATTCATTGTTTCTATTTCTTTCTCAATAATACTTTTATGAAGACAATTTGTTGTAAGAGGCTTTTCGTAACTTAA CTTTTTGTCTACAAAAAAAATTTGAAAATCTGCTTGACGCTGGATGTATGAATTTGCAAGTTTCTTTTGGTGTGTGTGTC TATATATTCCGAATGTAGTTTTTAAACTGTCTCTTTGAGTATCAATGTTTAACTGCCAAGTACTGTTCTTCATGTTAAAT TGTCTTTCAACACCGTCTGCATTTGGTTATAAAGAGGCATGATCTTTGCTACTTGCTACTAATAATTGATATCTGAGATT GTTGAAAGCCTTGCTTATGCATGCAAATTTTGTGCATTTGGGTTTCTCCATTCAAGGAAATGCCATATCATGGTTTTCAT TTTTTTTCCCATTGTCATCACTTTATAAAGTTTGATTCTGTAGCATGGCAAAAAGTGTTTTTGTTTGATAATTCTTCTAT AGTTCTTAGCAACTGGACCTTCCTTTTTATCGTGAAATTATATTTATGGATCTGTATCCTTACATTGTATCTCAGCTGTC ATTCCAAATGTGGACAAATCAAATACAAGATACACTAAATTCTAAGAAGCATGGCGATTCTGCTTTTCGTGCTAAGGACT TCTCTATGGCCATTGACTGCTATACACAAGTAAGTCAGCTACAAATGCTTCAAATAGTCATTCAGGAAAAATCTCCAAAA CAATACCCAAATCAATTCTTTATCACCTCATAGTATTTCATTCATATAATTCATCCAAACAAATAAATACTTTTCCATTG TAGATTTTATGAAATATTTGTTAGCATGCCTGACATAGTCCGTCTTTGCTACTTTGAATCTTTGAGCCAGAACTAGAATG ATGAGTTGGTAAAGGACTAAAAGGAGTTATTGCTTTTGAATTAGCATAAGTTAATAATTGAGGGACAGTTTTAGTTAAAT TTGTCATGAACGAACTATACTAAAAGCTTAAGTGTTGGGGTGAAGAAGGCACGTGAATGAAGCTTGGACAATGCCAAAGC TCACTACCTTGTGCTGAAACTTAACTGTTTTTTCATTAGAATAATGGGGGCAGCGAGGATCGAAGTTTAAACTATTGGGT GGAAACACATGAATGATCTTATATTATATTTCTAATTGTATCCATATATATCTTGCAAGTTGTAAAAGAGGGAGCTATTT TCAGAATAGACATTATCAAAGCTGTATAAACCTTAGCATTGCCATGTAGATTATATGTTCCCCTCCATTACCTACAAAGC ATGCTAAAAGAAGATTGAACTGTGATAACTTCTTTTTTAAGAGAGAATTCATGACACTTGTTTTATGCAGTTCATCGATG GCGGGACTATGGTATCACCAACCGTGTATGCGAGGCGCTGCTTATGCTACCTGATGAATGACATGGCACAAGAAGCACTT GGAGATGCCATGCAAGCTCAATCTATATCTCCCACCTGGCCCACTGCATTCTATCTTCAAGCAGTTGCCCTGTTCTTCCT TGGCATGGACAACGATGCACAGGAAAGTCTTAAAGACGGCACAACACTGGAAACCAGAAAGCATAAATATTGA
CDS sequence (LotjaGi3g1v0492000.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAATGGGCAATGAGGCTGAGGGTGGCCTTGTATTTAGCACAAGCTTTGGAATACTGCAGCATTAAAGGAAGAGCATT GTACCATGATCTTAATGCTTACAGAATTTTGTTTGATCAGGATGGCAACCCTAGACTCTCTTGTTTTGGACTCATGAAAA ATAGTAGAGATGGCAGAAGCTATAGCACAAATTTAGCCTTCACTCCTCCAGAGTACTTAAGGAATGGAAGAATCACCGCC GAAAGCGTAGTTTACAGTTTTGGAACCCTGCTGCTTGATCTTCTTAGTGGAAAGCATATCCCACCCAGTCATGCGCTTGA CCTTATACGAGGCAAGAACTTTCTGATGCTGATGGACTCAGGTTTGGAAGGTCATTTTTCAAATGATGATGGAACTGAGT TAGTGAGATTAGCTTCACGTTGTTTACAATACGAGCCTCGTGAGAGACCAAATACTAAAACGCTTGTGACAGCTCTAACC CCTCTTCAAAAAGAAACCTCAGTACCTTCATCTGTTTTATTGGGCATACCAGATGGGAGTCTATCACCAAAGGAAACAAT TTCATTAACACCTTTTGGTGAAGCTTGTTCAAGAAGAGATCTAACTGAAATACATGAAATTTTGGAAAAGGTGGGTTATA AGGATGATGAAGATGTTGCAAATGAGCTGTCATTCCAAATGTGGACAAATCAAATACAAGATACACTAAATTCTAAGAAG CATGGCGATTCTGCTTTTCGTGCTAAGGACTTCTCTATGGCCATTGACTGCTATACACAATTCATCGATGGCGGGACTAT GGTATCACCAACCGTGTATGCGAGGCGCTGCTTATGCTACCTGATGAATGACATGGCACAAGAAGCACTTGGAGATGCCA TGCAAGCTCAATCTATATCTCCCACCTGGCCCACTGCATTCTATCTTCAAGCAGTTGCCCTGTTCTTCCTTGGCATGGAC AACGATGCACAGGAAAGTCTTAAAGACGGCACAACACTGGAAACCAGAAAGCATAAATATTGA
Protein sequence (LotjaGi3g1v0492000.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKWAMRLRVALYLAQALEYCSIKGRALYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRNGRITA ESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSGLEGHFSNDDGTELVRLASRCLQYEPRERPNTKTLVTALT PLQKETSVPSSVLLGIPDGSLSPKETISLTPFGEACSRRDLTEIHEILEKVGYKDDEDVANELSFQMWTNQIQDTLNSKK HGDSAFRAKDFSMAIDCYTQFIDGGTMVSPTVYARRCLCYLMNDMAQEALGDAMQAQSISPTWPTAFYLQAVALFFLGMD NDAQESLKDGTTLETRKHKY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 6 | 6 | - | – | |
| ProSiteProfiles | 1 | 163 | 163 | 16.061 | ||
| Phobius | 1 | 16 | 16 | - | – | |
| PANTHER | 1 | 339 | 339 | 4.4E-213 | – | |
| PANTHER | 1 | 339 | 339 | 4.4E-213 | – | |
| SignalP_EUK | 1 | 16 | 16 | - | – | |
| Gene3D | 1 | 177 | 177 | 3.5E-39 | – | |
| SUPERFAMILY | 2 | 170 | 169 | 4.75E-24 | ||
| Pfam | 5 | 159 | 155 | 3.1E-13 | ||
| Phobius | 7 | 12 | 6 | - | – | |
| Phobius | 13 | 16 | 4 | - | – | |
| Phobius | 17 | 340 | 324 | - | – | |
| Gene3D | 221 | 340 | 120 | 1.6E-15 | ||
| SUPERFAMILY | 238 | 330 | 93 | 3.32E-14 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi3g1v0492000.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…