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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0492000 |
| Transcript ID | LotjaGi3g1v0492000.5 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase family protein; TAIR: AT5G59010.2 kinase with tetratricopeptide repeat domain-containing protein; Swiss-Prot: sp|B9FDE0|BSK3_ORYSJ Probable serine/threonine-protein kinase BSK3; TrEMBL-Plants: tr|A0A0L9T6M7|A0A0L9T6M7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0492000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:90974748..90977838) extracted from Lotus japonicus Gifu genome v1.2.
CATTGTAAGTTCTCATTCATTTGGTTTTCAATCTTACATTTTTCAGCAATCCATTGAAGAAAATATCTAATTTTGAAGTC TCTTTTGTTTGACAAGGATAAGGCATTTTGCTTTATAAGCTATATTAGGTGCCAAATTTAAGTAATCTACTCCTAGTAGC TTTTGTGGCAGTACAATTGATTCTTGATTCTGGAAGATCTGAATGTGAATCCAAACATGCTAATAGTTTGTGAAGCATTA TCATTTATCTCTATGTAAACCCCTGATTTTGTGATTTGTGTGAAATGCTCTGGCAGGGGAGACCCAGCCGATGAAATGGG CAATGAGGCTGAGGGTGGCCTTGTATTTAGCACAAGCTTTGGAATACTGCAGCATTAAAGGAAGAGCATTGTACCATGAT CTTAATGCTTACAGAATTTTGTTTGATCAGGTACTTCAGCTTTCATAACCTGGCTTTTTGCCTCTTTTAACTTTTTTTTT TCAACAATCTCTTATGTGGTATCAATGGTGGGCAGGATGGCAACCCTAGACTCTCTTGTTTTGGACTCATGAAAAATAGT AGAGATGGCAGAAGCTATAGCACAAATTTAGCCTTCACTCCTCCAGAGTACTTAAGGAATGGTAATAGTTGATTTAAGAT CAAAAAAAGTATATGCTAACGTGCTTGAACTCCACGTAAGCTACAATATTGAGCTTCTCTTCTAACGTGCTTTGGAGTGT GTGTCCAACACACATCCAAACATACTCATTGTCTTAACTGAGCTAACACCTGTTTGAAATTTGGCAGGAAGAATCACCGC CGAAAGCGTAGTTTACAGTTTTGGAACCCTGCTGCTTGATCTTCTTAGTGGAAAGCATATCCCACCCAGTCATGTATACT CCCTCCTTCCCATTTCATGACTTCTTATTTTAATTTTAGGTGGTGTTTTGTTCAGTAAATTTTTTACTTGTCAAATATTG GTACTTTAGATGATTTAAGTAACATCCTATGATGGTTTTGCTTAAAATGATCATCGCATTTATAGAGTTGATCCTTGTTC CCTTCACTTCACATACAGGCGCTTGACCTTATACGAGGCAAGAACTTTCTGATGCTGATGGACTCAGGTTTGGAAGGTCA TTTTTCAAATGATGATGGAACTGAGTTAGTGAGATTAGCTTCACGTTGTTTACAATACGAGCCTCGTGAGAGACCAAATA CTAAAACGCTTGTGACAGCTCTAACCCCTCTTCAAAAAGAAACCTCAGTATGCTCTTCCTATTCGCTTTCTCTCTGCTTT TGGGAACCATAGAAACATATTTGGTATTTGGCTTACCATTTGTGGTATTTCACAGGTACCTTCATCTGTTTTATTGGGCA TACCAGATGGGAGTCTATCACCAAAGGAAACAATTTCATTAACACCTTTTGGTGAAGCTTGTTCAAGAAGAGATCTAACT GAAATACATGAAATTTTGGAAAAGGTGGGTTATAAGGATGATGAAGATGTTGCAAATGAGGTAATTCATTGTTTCTATTT CTTTCTCAATAATACTTTTATGAAGACAATTTGTTGTAAGAGGCTTTTCGTAACTTAACTTTTTGTCTACAAAAAAAATT TGAAAATCTGCTTGACGCTGGATGTATGAATTTGCAAGTTTCTTTTGGTGTGTGTGTCTATATATTCCGAATGTAGTTTT TAAACTGTCTCTTTGAGTATCAATGTTTAACTGCCAAGTACTGTTCTTCATGTTAAATTGTCTTTCAACACCGTCTGCAT TTGGTTATAAAGAGGCATGATCTTTGCTACTTGCTACTAATAATTGATATCTGAGATTGTTGAAAGCCTTGCTTATGCAT GCAAATTTTGTGCATTTGGGTTTCTCCATTCAAGGAAATGCCATATCATGGTTTTCATTTTTTTTCCCATTGTCATCACT TTATAAAGTTTGATTCTGTAGCATGGCAAAAAGTGTTTTTGTTTGATAATTCTTCTATAGTTCTTAGCAACTGGACCTTC CTTTTTATCGTGAAATTATATTTATGGATCTGTATCCTTACATTGTATCTCAGCTGTCATTCCAAATGTGGACAAATCAA ATACAAGATACACTAAATTCTAAGAAGCATGGCGATTCTGCTTTTCGTGCTAAGGACTTCTCTATGGCCATTGACTGCTA TACACAAGTAAGTCAGCTACAAATGCTTCAAATAGTCATTCAGGAAAAATCTCCAAAACAATACCCAAATCAATTCTTTA TCACCTCATAGTATTTCATTCATATAATTCATCCAAACAAATAAATACTTTTCCATTGTAGATTTTATGAAATATTTGTT AGCATGCCTGACATAGTCCGTCTTTGCTACTTTGAATCTTTGAGCCAGAACTAGAATGATGAGTTGGTAAAGGACTAAAA GGAGTTATTGCTTTTGAATTAGCATAAGTTAATAATTGAGGGACAGTTTTAGTTAAATTTGTCATGAACGAACTATACTA AAAGCTTAAGTGTTGGGGTGAAGAAGGCACGTGAATGAAGCTTGGACAATGCCAAAGCTCACTACCTTGTGCTGAAACTT AACTGTTTTTTCATTAGAATAATGGGGGCAGCGAGGATCGAAGTTTAAACTATTGGGTGGAAACACATGAATGATCTTAT ATTATATTTCTAATTGTATCCATATATATCTTGCAAGTTGTAAAAGAGGGAGCTATTTTCAGAATAGACATTATCAAAGC TGTATAAACCTTAGCATTGCCATGTAGATTATATGTTCCCCTCCATTACCTACAAAGCATGCTAAAAGAAGATTGAACTG TGATAACTTCTTTTTTAAGAGAGAATTCATGACACTTGTTTTATGCAGTTCATCGATGGCGGGACTATGGTATCACCAAC CGTGTATGCGAGGCGCTGCTTATGCTACCTGATGAATGACATGGCACAAGAAGCACTTGGAGATGCCATGCAAGCTCAAT CTATATCTCCCACCTGGCCCACTGCATTCTATCTTCAAGCAGTTGCCCTGTTCTTCCTTGGCATGGACAACGATGCACAG GAAAGTCTTAAAGACGGCACAACACTGGAAACCAGAAAGCATAAATATTGA
CDS sequence (LotjaGi3g1v0492000.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAATGGGCAATGAGGCTGAGGGTGGCCTTGTATTTAGCACAAGCTTTGGAATACTGCAGCATTAAAGGAAGAGCATT GTACCATGATCTTAATGCTTACAGAATTTTGTTTGATCAGGATGGCAACCCTAGACTCTCTTGTTTTGGACTCATGAAAA ATAGTAGAGATGGCAGAAGCTATAGCACAAATTTAGCCTTCACTCCTCCAGAGTACTTAAGGAATGGAAGAATCACCGCC GAAAGCGTAGTTTACAGTTTTGGAACCCTGCTGCTTGATCTTCTTAGTGGAAAGCATATCCCACCCAGTCATGCGCTTGA CCTTATACGAGGCAAGAACTTTCTGATGCTGATGGACTCAGGTTTGGAAGGTCATTTTTCAAATGATGATGGAACTGAGT TAGTGAGATTAGCTTCACGTTGTTTACAATACGAGCCTCGTGAGAGACCAAATACTAAAACGCTTGTGACAGCTCTAACC CCTCTTCAAAAAGAAACCTCAGTACCTTCATCTGTTTTATTGGGCATACCAGATGGGAGTCTATCACCAAAGGAAACAAT TTCATTAACACCTTTTGGTGAAGCTTGTTCAAGAAGAGATCTAACTGAAATACATGAAATTTTGGAAAAGGTGGGTTATA AGGATGATGAAGATGTTGCAAATGAGCTGTCATTCCAAATGTGGACAAATCAAATACAAGATACACTAAATTCTAAGAAG CATGGCGATTCTGCTTTTCGTGCTAAGGACTTCTCTATGGCCATTGACTGCTATACACAATTCATCGATGGCGGGACTAT GGTATCACCAACCGTGTATGCGAGGCGCTGCTTATGCTACCTGATGAATGACATGGCACAAGAAGCACTTGGAGATGCCA TGCAAGCTCAATCTATATCTCCCACCTGGCCCACTGCATTCTATCTTCAAGCAGTTGCCCTGTTCTTCCTTGGCATGGAC AACGATGCACAGGAAAGTCTTAAAGACGGCACAACACTGGAAACCAGAAAGCATAAATATTGA
Protein sequence (LotjaGi3g1v0492000.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKWAMRLRVALYLAQALEYCSIKGRALYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRNGRITA ESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSGLEGHFSNDDGTELVRLASRCLQYEPRERPNTKTLVTALT PLQKETSVPSSVLLGIPDGSLSPKETISLTPFGEACSRRDLTEIHEILEKVGYKDDEDVANELSFQMWTNQIQDTLNSKK HGDSAFRAKDFSMAIDCYTQFIDGGTMVSPTVYARRCLCYLMNDMAQEALGDAMQAQSISPTWPTAFYLQAVALFFLGMD NDAQESLKDGTTLETRKHKY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 6 | 6 | - | – | |
| ProSiteProfiles | 1 | 163 | 163 | 16.061 | ||
| Phobius | 1 | 16 | 16 | - | – | |
| PANTHER | 1 | 339 | 339 | 4.4E-213 | – | |
| PANTHER | 1 | 339 | 339 | 4.4E-213 | – | |
| SignalP_EUK | 1 | 16 | 16 | - | – | |
| Gene3D | 1 | 177 | 177 | 3.5E-39 | – | |
| SUPERFAMILY | 2 | 170 | 169 | 4.75E-24 | ||
| Pfam | 5 | 159 | 155 | 3.1E-13 | ||
| Phobius | 7 | 12 | 6 | - | – | |
| Phobius | 13 | 16 | 4 | - | – | |
| Phobius | 17 | 340 | 324 | - | – | |
| Gene3D | 221 | 340 | 120 | 1.6E-15 | ||
| SUPERFAMILY | 238 | 330 | 93 | 3.32E-14 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi3g1v0492000.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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