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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0515700 |
| Transcript ID | LotjaGi3g1v0515700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Amidophosphoribosyltransferase; TAIR: AT2G16570.1 GLN phosphoribosyl pyrophosphate amidotransferase 1; Swiss-Prot: sp|Q9SI61|ASE1_ARATH Amidophosphoribosyltransferase 1, chloroplastic; TrEMBL-Plants: tr|G7JL07|G7JL07_MEDTR GLN phosphoribosyl pyrophosphate amidotransferase; Found in the gene: LotjaGi3g1v0515700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:93271943..93274391) extracted from Lotus japonicus Gifu genome v1.2.
AAGAAGCATCGTTTCATTATATTTCAGAGAATTTTGATGATTGGCTATTAAATCACCAAATAGAATATCTAAGGAGGAAA AAAATACTAGTGACTTTGGCTGGCCCTAAACAAAACCTAGAACCACGAGCATCCGAGTCCTCCTCGCAACCTTGCAAGTT GCAACACTACACAAGCCTCTCACCTCGTTCTCCATTTTCCTCCACAACACAACCATGTCCTCCATGGCTGCATCTTCCTC CCTCTCCACTTTCTCTCCTTCCTCTTCCCTCTCCAAACCCTCCCCTCTCTCTCCTCCTCCTACCACCACCCGCTTCTTCA CCAAAACCCTCCCAAAACCCACCCTCTCTCGCGCCGCCGCCAGACCCCCCTTCATCGCTTCCTACAAAAACTACTTCTCC GACGCTGTCTCCTCCAACAACGCCACCCCACCACCGCAAATCCACTCCGATGATGATGACGAGAAGCCCCGGGAGGAGTG TGGGGTTGTGGGCATATACGGTGACCCTGAAGCCTCTCGCCTCTGCTACCTCGCCCTTCACGCGCTGCAACACCGTGGCC AGGAAGGTGCTGGTATTGTCACCGTCAACGACAGCAACGTGCTTCAGTCAATCACCGGTGTCGGGCTTGTCTCCGATGTC TTCAACGAGTCCAAGCTGGATCAGTTACCAGGTAGTTTGGCTATTGGGCATGTTCGTTATTCCACTGCAGGGCAATCCAT GTTGAAGAATGTTCAGCCTTTTGTTGCTGGGTACCGTTTTGGTTCTGTTGGGGTTGCTCACAATGGGAATTTGGTGAACT ACCGCACCTTGAGGGCTAAGCTTGAAGAGAGAGGTTCCATTTTCAACACTACTTCTGATACTGAGGTTGTGCTTCATTTG ATTGCTACCTCGAAGCATAGGCCTTTCATTTTGAGGATTGTTGATGCTTGTGAGAAGCTTGAAGGGGCTTATTCTATTGT GTTTGTGACTGAGGATAAGCTTGTTGCGGTGAGGGATCCGTTCGGGTTTCGGCCTTTGGTTATGGGGAGGAGGAGCAATG GTGCTGTTGTTTTTGCTTCTGAGACTTGTGCCCTTGATTTGATTGAAGCTACTTATGAGAGGGAGGTTTACCCTGGTGAG GTTTTGGTGGTGGATAAAAATGGGATTCAATCCCTTTGCCTCATGGCTCACCCTGAGCCGAAGCAGTGTATCTTTGAGCA TATTTACTTTGCTTTGCCCAATTCTGTGGTTTTTGGGAGGTCAGTGTATGATTCTAGGAGGCAATTTGGTGAGATATTGG CCACTGAGAGCCCTGTGGATTGTGATGTTGTGATTGCAGTTCCTGATTCTGGTGTTGTTGCTGCGCTTGGTTATGCTGCC AAAGCTGGGGTTCCTTTTCAGCAGGGGCTGATCAGGTCACACTATGTTGGAAGGACCTTCATTGAGCCATCTCAGAAGAT TAGGGACTTTGGTGTGAAGTTGAAGCTCTCACCGGTTCGTGCCGTGCTTGAAGGCAAGAGGGTTGTGGTTGTTGATGACT CAATTGTGAGAGGAACTACCTCATCCAAGATTGTGAGGTTGCTGAAGGAGGCTGGTGCTAAGGAAGTTCACATGAGGATT GCTAGTCCTCCAATTATTGGTTCATGTTATTATGGGGTGGATACTCCTAGCTCTGAGGAGTTGATCTCTAATAGGATGAG CACGGAGGAGATAAGGGAGTTTATTGGATCAGATTCACTTGCTTTTCTGCCAATTAATAGCTTGCAGGGTCTGTTAGGCA AGGACTCTCCCAATTTCTGTTATGCTTGTTTCTCTGGGAAGTACCCTGTTGAGCCAAGAGAACTTAAGGTGAAGAGGGTT GGTGACTTTGTGGATGATGGGTTGAATGGGAGTTTGGAGTCTATTGATGGTGGCTGGGTTCAAGCAAACAGAAATCACAT AGAGGTGAAGGCTGCTACTGGTCTTTAACAATTGCACTGTTTCTCTGATTTTGCATTGCTTTTCAGTTTCATAATGTATG GTTACTACCTCTGTGATGTGGTTGTGGTACGGTGAGAGATAATGTCAAACTATCTAACTACAGTGGTATGGTGAGCTCCA TCTTAATCATTTGGATTCTGAAGGCCAATGCTTTATACTTATTGTTGGTCATAACTTGATATTTGGAGCCTTTGTTATCT AGGACATAGAACAGTGATTATAAGAACTTTGGTTGTTTTTCTTTTATATAGGATTTTGTTCTAAACAGCTTATTGCTATG TTCCTCAATTTTGAAAGGCCCTTTTTGATGTTCTTGGGTTATTCATCTCCATCTCTTTTATTGTATATATATATATTGGT TCAAGTAGGTGAAAGAAAGGGAAATTAACATGTTTAAATGAACACAGAGATATATTTACTTGGCAAAATAAAAAAACTTA ATTGATCACTAATATATATTTGCCATAACTTAATCTTGTCCTTTATCTT
CDS sequence (LotjaGi3g1v0515700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCCTCCATGGCTGCATCTTCCTCCCTCTCCACTTTCTCTCCTTCCTCTTCCCTCTCCAAACCCTCCCCTCTCTCTCC TCCTCCTACCACCACCCGCTTCTTCACCAAAACCCTCCCAAAACCCACCCTCTCTCGCGCCGCCGCCAGACCCCCCTTCA TCGCTTCCTACAAAAACTACTTCTCCGACGCTGTCTCCTCCAACAACGCCACCCCACCACCGCAAATCCACTCCGATGAT GATGACGAGAAGCCCCGGGAGGAGTGTGGGGTTGTGGGCATATACGGTGACCCTGAAGCCTCTCGCCTCTGCTACCTCGC CCTTCACGCGCTGCAACACCGTGGCCAGGAAGGTGCTGGTATTGTCACCGTCAACGACAGCAACGTGCTTCAGTCAATCA CCGGTGTCGGGCTTGTCTCCGATGTCTTCAACGAGTCCAAGCTGGATCAGTTACCAGGTAGTTTGGCTATTGGGCATGTT CGTTATTCCACTGCAGGGCAATCCATGTTGAAGAATGTTCAGCCTTTTGTTGCTGGGTACCGTTTTGGTTCTGTTGGGGT TGCTCACAATGGGAATTTGGTGAACTACCGCACCTTGAGGGCTAAGCTTGAAGAGAGAGGTTCCATTTTCAACACTACTT CTGATACTGAGGTTGTGCTTCATTTGATTGCTACCTCGAAGCATAGGCCTTTCATTTTGAGGATTGTTGATGCTTGTGAG AAGCTTGAAGGGGCTTATTCTATTGTGTTTGTGACTGAGGATAAGCTTGTTGCGGTGAGGGATCCGTTCGGGTTTCGGCC TTTGGTTATGGGGAGGAGGAGCAATGGTGCTGTTGTTTTTGCTTCTGAGACTTGTGCCCTTGATTTGATTGAAGCTACTT ATGAGAGGGAGGTTTACCCTGGTGAGGTTTTGGTGGTGGATAAAAATGGGATTCAATCCCTTTGCCTCATGGCTCACCCT GAGCCGAAGCAGTGTATCTTTGAGCATATTTACTTTGCTTTGCCCAATTCTGTGGTTTTTGGGAGGTCAGTGTATGATTC TAGGAGGCAATTTGGTGAGATATTGGCCACTGAGAGCCCTGTGGATTGTGATGTTGTGATTGCAGTTCCTGATTCTGGTG TTGTTGCTGCGCTTGGTTATGCTGCCAAAGCTGGGGTTCCTTTTCAGCAGGGGCTGATCAGGTCACACTATGTTGGAAGG ACCTTCATTGAGCCATCTCAGAAGATTAGGGACTTTGGTGTGAAGTTGAAGCTCTCACCGGTTCGTGCCGTGCTTGAAGG CAAGAGGGTTGTGGTTGTTGATGACTCAATTGTGAGAGGAACTACCTCATCCAAGATTGTGAGGTTGCTGAAGGAGGCTG GTGCTAAGGAAGTTCACATGAGGATTGCTAGTCCTCCAATTATTGGTTCATGTTATTATGGGGTGGATACTCCTAGCTCT GAGGAGTTGATCTCTAATAGGATGAGCACGGAGGAGATAAGGGAGTTTATTGGATCAGATTCACTTGCTTTTCTGCCAAT TAATAGCTTGCAGGGTCTGTTAGGCAAGGACTCTCCCAATTTCTGTTATGCTTGTTTCTCTGGGAAGTACCCTGTTGAGC CAAGAGAACTTAAGGTGAAGAGGGTTGGTGACTTTGTGGATGATGGGTTGAATGGGAGTTTGGAGTCTATTGATGGTGGC TGGGTTCAAGCAAACAGAAATCACATAGAGGTGAAGGCTGCTACTGGTCTTTAA
Protein sequence (LotjaGi3g1v0515700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSMAASSSLSTFSPSSSLSKPSPLSPPPTTTRFFTKTLPKPTLSRAAARPPFIASYKNYFSDAVSSNNATPPPQIHSDD DDEKPREECGVVGIYGDPEASRLCYLALHALQHRGQEGAGIVTVNDSNVLQSITGVGLVSDVFNESKLDQLPGSLAIGHV RYSTAGQSMLKNVQPFVAGYRFGSVGVAHNGNLVNYRTLRAKLEERGSIFNTTSDTEVVLHLIATSKHRPFILRIVDACE KLEGAYSIVFVTEDKLVAVRDPFGFRPLVMGRRSNGAVVFASETCALDLIEATYEREVYPGEVLVVDKNGIQSLCLMAHP EPKQCIFEHIYFALPNSVVFGRSVYDSRRQFGEILATESPVDCDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGR TFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIGSCYYGVDTPSS EELISNRMSTEEIREFIGSDSLAFLPINSLQGLLGKDSPNFCYACFSGKYPVEPRELKVKRVGDFVDDGLNGSLESIDGG WVQANRNHIEVKAATGL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 20 | 20 | - | – | |
| Phobius | 1 | 20 | 20 | - | – | |
| MobiDBLite | 1 | 20 | 20 | - | – | |
| Phobius | 1 | 4 | 4 | - | – | |
| MobiDBLite | 1 | 46 | 46 | - | – | |
| Phobius | 5 | 13 | 9 | - | – | |
| Phobius | 14 | 20 | 7 | - | – | |
| Phobius | 21 | 577 | 557 | - | – | |
| MobiDBLite | 66 | 87 | 22 | - | – | |
| PANTHER | 66 | 559 | 494 | 0.0 | – | |
| PANTHER | 66 | 559 | 494 | 0.0 | – | |
| Hamap | 88 | 530 | 443 | 45.694 | ||
| SUPERFAMILY | 89 | 325 | 237 | 1.37E-67 | ||
| Gene3D | 89 | 532 | 444 | 2.6E-155 | ||
| ProSiteProfiles | 89 | 309 | 221 | 47.681 | ||
| TIGRFAM | 89 | 531 | 443 | 4.2E-153 | ||
| CDD | 89 | 340 | 252 | 4.71884E-150 | ||
| Pfam | 168 | 287 | 120 | 3.8E-25 | ||
| SUPERFAMILY | 325 | 536 | 212 | 5.25E-67 | ||
| Gene3D | 349 | 513 | 165 | 2.6E-155 | ||
| CDD | 352 | 463 | 112 | 1.3608E-20 | ||
| Pfam | 364 | 459 | 96 | 3.8E-9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Amidophosphoribosyltransferase activity | Catalysis of the reaction: 5-phospho-beta-D-ribosylamine + L-glutamate + diphosphate = 5-phospho-alpha-D-ribose 1-diphosphate + L-glutamine + H(2)O. | ||
| Biological process | Purine nucleobase biosynthetic process | The chemical reactions and pathways resulting in the formation of purine nucleobases, one of the two classes of nitrogen-containing ring compounds found in DNA and RNA, which include adenine and guanine. | ||
| Biological process | Nucleoside metabolic process | The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (a ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleoside), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine). |
Expression pattern of LotjaGi3g1v0515700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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