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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0543600 |
| Transcript ID | LotjaGi3g1v0543600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pentatricopeptide repeat-containing protein, putative; TAIR: AT1G30610.2 pentatricopeptide (PPR) repeat-containing protein; Swiss-Prot: sp|Q9SA76|PPR64_ARATH Pentatricopeptide repeat-containing protein At1g30610, chloroplastic; TrEMBL-Plants: tr|A0A072TLM0|A0A072TLM0_MEDTR Pentatricopeptide (PPR) repeat protein; Found in the gene: LotjaGi3g1v0543600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:95966537..95974619) extracted from Lotus japonicus Gifu genome v1.2.
TCACATTATCACAAGCTAACTCGTCCCTAGCCAAATTTTCAAAGTGTATCAGTTTTGGGACACAACAGGATGAGAATGTT GATACTTTGAGTTTGAGAGACCACGCTGGTTTCCCAGCACAGTCTGGTTGAGCTCGTCGAAGGAAGCAGCTAAACTACAT ATGACCTTGTCACTGTAAGTCCTGTCTGGATTTCCGTTGAATTCAATTCTACAAACCACGTTTGTTTCGGTTTTGAGAAA CACCAACACTACAGGAAATATGGGAGTTGTTTGCTTTGAAATCAATGGAAATTCTGCTTCTGCTTTACATTATGTTTCCA ATTCGTTCTCTTCATATGCGGTTCCCATTTCTTCGAGACCCTTCTTCGGTAATGCTTTGAGTGTGAGGGTTGGGAGGAAG TTTCAGGTCTCCCATACACGAAAACTCAATATTGGGCCAGTCATGGTTTCCCTCAATGGTGGCTCTGGCTCTAATGCTGG GTCGGTCAGTGAAGTTCTTCGTCTCAAGGATATGGAATTTAAGCCATCATTTGACGAGTATTTGAAGGCTATGGAATCTG CCAAAACTGGAAGGGGCAAGAAGCATGCTGCTACTCAAACACAGAAGAAGATGAAAATGGGGGTTGATGATGGAAATAAA ATTTTTAAAAGGGTCGGAGAGAAAATTGATAAAAAAGATGATTTTGAAGATGTGGGGTTAAGAGTTGATGAAGCTGTTAT GGACAAAGAAGGCTCATCCACAAGTCATGGAAAGTTAAGAGGAGGGTTTAAGAAGGAATTTGATGGGAAAGAAAGTAATC TTGATGTCAAGGCGAAGCAGAAGCATGGGGCAAACATGAGGCAAGGTGAGTGGTTGAAACGCCAGAGTCATAGCTTAGGA TCAGAATCTGATGACCGCAGTGTGGTTAAGCGTCGAGGCGAAAATGGAAGTGGAAGGATAAGCAATAGCATAATTAGGTC TAATTCGACTGGTAGCCGTAACAGTCAAGGCAGAAATGGAAGTGGAGGGATGAGCAATAATATGATTAGGTCGAGTTCGA ATGGTAGCCGTAACAGTCAGGGAAAATATGGAAGTGGAAGGATGAGCAATAACATGATTAGGTCTAATTCGAATGGTAGT CGTGGGAGTGTCATTGACAGGGGTGTCCCTTATAATATGTACTCTTCAAAGGTATCAAGAGATAGTGGACAAAGAGGAGG GATGAGCAAAAACATAATTAGGTCTAGTTCGAATGGTAGCCGTGGGAGTGTCATTGACAGGGGTGTCACTCATGATTTAT ACTCTTCAAAGGTATCAAGAGATAGTAGACAAAGAGGAGGGATGGGCAATAACATCATTACGTCTAGTTCGAATGGTAGC CGTGGGAGTACCATTGACAGGGGTGTCACTCATGATTTATACTTTTCAAAGGTATCAAGAGATAGTAGACAAAGAGGCCA CAACATGGGTGGAGATAAAATAGTAGCAAGCAGAAAAGTTATGGATAGAGGGCTTGAAAGAAAACATATTGAATCTGAGA GTTTGGTAAATAGAAATGGGCGGGTGAGCAGTAAGCGTTTCCTCGATAGGGGTTATGATTCTGACAATTTGGAAGTGGAA CGAGCTGCATTCAAGAATCTTGAGGACCCAAAAAATGTTATCAGCAAGAAACAATTTTCACATAAGGAAATGGAGGAGAA AATTCAGACGCTAGCCAAATCGTATGTTGTCCATTCCTTTTTTCCTGCCTTTGGGATGCCTAAATAATGTGCTCAGGACA TTAGTGTACGCATAAAGTTTTAATCTGCATTTTCTTTTTCTCTTACAAGCAAGTTTTAGTAAAATGCTGCCTCAGGGAAC AACTGAAGCAATATTCACATGATGCTTAATACCTGGTCTGTGATAGTTTGGCTTCATATTCATTTAATGGTTTAAATGTA AATTTATTCCTCTAGGAGTTTTCTTTTCTCATCATGCTATATTAGCTTTCCATTCAAATTGGAGCTCAATGCCACTAGTC AGTGTGCCAATAGTCAGTGTAGGAACAAGTTAGACCTTTTCCTCAGCAGTACACATAATTTCTTTATCATTTTTCATTAA AATTGACTTGTATGATTGGTTATCTGGGGGTTTATAAATTTATAATCCTTTGTTGTGGTTTGGAGCTGCATCATACACAA TTTACAAGTTTGCAACTTGTTCTAGTACATAATTCAGTTATATATTTCTTCTCAGGAGACTTCTGATTTGTGAACCTTGT ATGTTCTCCTATCGTCTGGATTCATGAGAGCAAAATCATTTTTCGTCTCTGCATCTATGAATATAGATTTCTGTTGGCCC CAAAGAAGAATAGGGAACAGAAAGAATCTGATAGGAGTTGCATATTTCGTGTGGGAAAAACACCATACTGAGCTTCTTTA TATGCTCCTCAAAATTTATGATGCAAATGGTGATACGAATAATATATCTCAATTACTGCAGGAATATTAAAAATTTAAAA CATTATGTTAGTAATTTAGTAACAAAAGCTGGGCTCCTAGCACCATTGTTTTCATTGTCTATAGACTGCTTCCTTTTTCT TTAGAATTCTTTTAACAGACTAATATTATGGTTAAATAGATATTACAGATATCATGTGAGTAAATGTTGCTTCATGTGAG GGGTTAATCTTTATCTTTCCTTCAAGCCTTTATGTTTACAATCCAGGCTTATTATTGGTGTGTGATTTTCGAGCTTTTTT ATATTTTTAATCATTTTAAAGTGTTTCATGTCTTGACCATTTTCTCAAACAGGTTGAATGGTGCAGATATCGGTTTACCT GAATGGATGTTTTCCCAGATGATGAGAAGTGCAAAACTCAAATTTAATGACTATTCGATAACCAGGGTTATCATACTCTT GGGAAATCTAGGAAACTGGCGTCGAGTGGTACAGGTCATCGAATGGCTTCAAAGGCGTGAGCGTTTCAAGTCCTATAAGC TAAGGTACTTGAGTGGCCTTTGTTACACTACGTATGACTGAAGTTTGAATACAAGTGATGATCAACCACCTGTATAGATA TCTTAGAAAATGATTGTAATCAACCCAACTATTGAACTATGCATAATTATCATATTATTTTTCAGTCTAATTTATATAAA AATTAAATAAATTTACGTATGTGATCAAATGGTGGATTTATTTGCTTATTTGGAAACTATATTATACTTTGATTTTATGA TACATTGGAGTAGAGAACTATGCTTGATTAATATTAAATTTTGTACCCATATTCTTCCAATCTAGTGGCTGGTTCCCAAA GTATGTAACAGTGTTATTCAATTGTGTAAGACTGATTTTTCAGACACATAAAGGAGCCTTTTTACATGTATACTTCTATC TCAGCCTAGACAATTTCCTCAAGTATCCATTAATGTGCCAATCATTGACATTAGGCATATATATACTGCTGCTCTTGGTG CACTTGGGAAGTCGAAGAGACCCGTAGAGGCACTGAATGTATTTCATGCTATGCTGGTAATGGATGTAATCCTTGAAATA TTACTGAAATATATGTTGATTGACATGATATTGGAATATGGACAACTTCACTAACACTTTTTCCTTTTCTTTCAGCAACA AATGTCCTCATATCCTGACTTAGTAGCTTATCATAGTATTGCTGTTACTCTAGGGCAAGCAGGGCACATGAAGGAACTCT TTGATGTGATTGATATTATGCGATCACCACCAAAGAAGAAGATCAAAACAGAGATATTTGAGAACTGGGACCCAAGACTG GAACCAGATATTGTAGTCTATAATGCTGTGAGTCTTCTAAAAAAGGAGCATATTTTAGATGTTTAAGTAGTAGCTGTTCT AATCCATATCTTTGGAGGCCATTTCTATCTTTGGGGGCCACTTCTATCTTTGGGGTCTGAAATTTCATCTTTTTGAATGT GCAAGTCAAAGACCAAGAACAGATATTCTAACGATATGGAAAATCATATGTATGCAGCTAATACTAGATTGGTCTAAAAA ATAATAACTATTATGATCAGTTCAAATACTTTCTCGTAGTGCATCAGTTGCCTCATTGCCTGTTTAGAATTTGCTATTTC TTCTTATCTTTTGGGTTGCATAAGAAGGTTTTGATGATCCATTATCTTCCAACGATTATATCCCAAGTAAAATTTGCTAT TCAAAGTAGCACATGATATCAGCTGCATCCTTAAATGGATAATTAACATAACAGGCGTCAGGCTTGCACGCATGATATTT GTTTAACTTCATCTTTTTGTGGATCAGTTGTTTATTCTGATCTATACTATTGTGAGTGGGATTTCTCATACTCCACACCC AGTGTTGATTGAATAACTATTTTGCTTCACTGCTTTAATGTTACATATGAAAATATTTATGTAAATAAGTTTCATAATTG CCGAGTTTCATAATTTAGGCCTGATTTACTAATTTTTATATCACTTGGGTACGCAGGTCCTTAATGCCTGTGTTAAGCGG AAGCAGTGGGAAGGGGCCTTTTGGGTTCTACAGCAGTTAAAGAAACAGAACCTACAACCTTGTCCTGCAACTTATGGCCT AGTTATGGAGGTAGCGGTTGCCTCTAGTTTTGTTTTCTCTGAGTTGCATTTTAATATTTTACATGAATCTTGATAAATAA CAAAAGTTTTTAATCAACCTGAACCTGAGAAGTAAAATTGGGCAGTTATATTGTAAATTTTGGTATTTAAATTTAACAAT ATTAAGATTCTATTAGAAATAGAGTACAAAGAACTAGGATGCAATACCTCTTAGAGTAGCAGATCACAGAGCATAGGAGA AAATAATTGTCAATTGCATCAACTTGAATGAGTGGCCTACTTACTCATTCACCCTTGGAGTTGAAGAATTTTTTTAATTT GAATAAATGTGGTATGAGATCTTTATGAGATATTCAGATTTAGGACAAGGTTTGTACTCCTGGTTGAGTGAAATAGTAAA AAATAAAAATAACTTGTTCATTTCATGGAAAAACAGGAAAGCCACAAAATCAATTGCTTGTATCAATGAATGTTGTCTTG CACATAATTCATGAATTTGTATTATGCTTGAGCAGGTGATGTTTTCATGTGGCAAGTACAACTTGGTTCATGAATTTTTC AGAAAACTTCAGAAGTCTTCTATTCCCAATTCATTAACTTATAGAGGTATCCTCATTTATTTTTGTATCCCTGTGAATCA CTTAATTTCATTATGATCTTGACCTTCCTGTCCTGTTGTATGCAGTTCTCGTGAATACGTTTTGGAAAGAGGGGAAAACT GATGAGGCCATATCAGCTGTCCAAGAAATGGAAACACGTGGAATTGTAGGTTCTGCTGCCATTTATTATGATCTAGCTCG ATGCCTCTGTGCAGCTGGAAGAGGTCGTGAGGCACTGATGCAGGTGTGTTTTGTTATTCCTATTTTCTCTTGCAGTTGGC TTTCATGTTAGGGTATGGAGCTTATAAAATCTTAAAAGAACAATGAACATCCAAAAGTAAATTAGTTTTGTTATCCCCTT TCTTGTTGAAAGTATGCTCTGATATTTTGAGTGAATTTTCAAGATAGTCCATCTCTGAGAGACTAATATGTGACACAATT TTTAGCGGAATAATATGGTGACTTGTACATAATGTTTGGTTCGAATTTTTTTTGGAGGATCTTCATTTGGTTCAAAAGTT TGAAGGGGCGGCGAGGGAAAATGAAGGATTAAAAACCCCTCTCCTCCTAGGTTTGCCTCTCGTCCAAAATTGGAGACATT TGGAGGGGAGGGAAAATAACTTTTTTTTGGGCTAGCTAAAACATCTTTTGTAATTTTATTTTGAATTTCAAAACTACCCT TTGCATATTTTATCCTTAACATTCTTCTTATGCTACTAAAGTTGCTTCATGCCTCTTCACTTTAACATTGTGCCAACCTT ATTCTAGAGCTTCTTTATATCAGTTCAAGTCATATTAGTTGAGGTTTGTTATATTTCCTTTCTTTTAGCTTTAGGAAGGA GATAAAAGTAAATTACTTTTATTTTCCCTCCCTTCCCCTTGCACACCAAATAATGGAAAGATTATTTCGCCTCCCTCCCC CTCCTCTCCAGTAAAATCTGTTCTTGTCTCCTCTCGTTTGGACGAAACACTGTTAGATCTTGAATTTAATAGACTAATTT TACGACCGGAAGTTTTGAGTAGTAATATGGTGATGTTAGTGAAAATATCAACTTGGGAGTTTATCCTTTTTTCTCAAGCC ATATTCTAAACTCCACTCAATGCAAGCAGGAATTACACTAGCATCCAAATCTGTCCTGATCTCTAACAGGATATATCTCT CTCAGACAAGCCAGATCGCATCATATATGGCAATGCCAAACAAAACTGAACATATGCTAAGTGCTAACTAACCTTACTTG TTCAAATTTCTCACCATCCATCTTACCCATTCGACACTAAGTCATATAATGATTTTGCACTTCCTTGAATTTGGCTGTGA AAGTTTTACATGAAGTCTTTGTCCAAGCCCAATGAAAAAGGTGTGAACAAAATGCTCACTTCAGTTGATGTGTTGATTGG ACCATTTTTATTGTCTGTTAATTCTGTGTTGGATAAATTCTCTAATTTTAAAGAGAAGCGCCCTGTGCATTCTGAAAAAT ATGTTAATTTTAATGTTCAAGGGTTTTTATATAGCTTGACCACTGAAGGTATTGCTCGTCCTTTGACAGATAGACAAGAT ATGTAAGGTTGCAAATAAACCACTAGTAGTAACCTACACTGGTTTGATGCAAGCAAGTCTAGACTCTGGAAACATTCAAG ATGGGGCTTATATTTTTGAGAAAATGAAGGAAATTTGTGCTCCGAATCTGGTTACTTATAACATAGTGCTGAAAGCTTAC CTGGAACATGGGATGTTTCAAGAAGCTAAAGAGTTGTTGGAGCAAATGTTGGAAAACACAAATCATCTGAGGGAAAAAAC TGACAATAAGATGCGGGTGATACCAGATATATACACATTCAATACCATGTTAGATGCATGTGTTGCAGAGAGGAGATGGG ATTATTTTGAGTATGTCTATCAAAGGATGTTGTACCACGGTTACCACTTCAATCCAAAACGACATCTTCGAATGGTACTG GAGGCTTCAAGAGCTGGAAAGGTGACCTTCCTATTCTTTTTGTACATAGTCATTGATTATGAATGACCCTTATGACAATA AACACTTATATGACAATAAACACTTATCATATAAGTGTTTATCAGAGGCTTATTGGAGAAACTTATTGAAATAAGCTCAA AATAACTATAAGTATGTATAATAAGCGTCCATTCATAAGTTAATATGAACGACTTATGAAAATAAACTCAAAAGAGCTTA TAGGTAGACCATGACCCGTGAGTTATTTTTGTAAGCTTACTCAAACACTTTCCATAAGTGCTTATGCTATTAGATAAACA TGGTTTATATAGAGAATTAGAGGTATTAGCTTTATGAGGAAATCTGAGACCATTCATTAACTCATGGAACCTTGCTTTGT TTCCAGGAAGGGCCATTGGTGATAACATGGAAGCACTTGGCCGCGACAGATCGACTTCCGCCAGTTTCTCTGGTCAAGGA GAGGTTCTGTGTGGAGCTTGAGAAACATGACCATGTTGCTGCTCTCACATGTATCATCAACTATCCCCCAAAAGATTTGG AGCCATTCTCCAAGTCTTCATGGTTGAGTCTGTTCAAAGAAAATTCTCAGAGGTATCAGAAGGACACAATTGTTAGACTA ATAAATGGGGCTAGCAATGTCGTTTCCAATAGTAGCTTGCCAAATCCAATACTTGTGTGTTTAATGCAATCATGCAAAGA ATTTTTTTTCGCCACTGATGTTAGTGGAGCTGACATGGATTCAGTGAAAAATGTATTTGCAGTAGATAGTAAACTAGCGG TAGCCAAAGATGATCCAAAACTTTGTAATATAAACTCAACCAAAATCCAATGAAAGCCTTTTATTAATAGCATGTTTGGA CGAACTTGTCTTTTCTCATAATTAATTATGACACGTAAAAACTACTTGCATAAGCTTCTCCCCATAGTTGATTTTACCTC CAG
CDS sequence (LotjaGi3g1v0543600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAGTTGTTTGCTTTGAAATCAATGGAAATTCTGCTTCTGCTTTACATTATGTTTCCAATTCGTTCTCTTCATATGC GGTTCCCATTTCTTCGAGACCCTTCTTCGGTAATGCTTTGAGTGTGAGGGTTGGGAGGAAGTTTCAGGTCTCCCATACAC GAAAACTCAATATTGGGCCAGTCATGGTTTCCCTCAATGGTGGCTCTGGCTCTAATGCTGGGTCGGTCAGTGAAGTTCTT CGTCTCAAGGATATGGAATTTAAGCCATCATTTGACGAGTATTTGAAGGCTATGGAATCTGCCAAAACTGGAAGGGGCAA GAAGCATGCTGCTACTCAAACACAGAAGAAGATGAAAATGGGGGTTGATGATGGAAATAAAATTTTTAAAAGGGTCGGAG AGAAAATTGATAAAAAAGATGATTTTGAAGATGTGGGGTTAAGAGTTGATGAAGCTGTTATGGACAAAGAAGGCTCATCC ACAAGTCATGGAAAGTTAAGAGGAGGGTTTAAGAAGGAATTTGATGGGAAAGAAAGTAATCTTGATGTCAAGGCGAAGCA GAAGCATGGGGCAAACATGAGGCAAGGTGAGTGGTTGAAACGCCAGAGTCATAGCTTAGGATCAGAATCTGATGACCGCA GTGTGGTTAAGCGTCGAGGCGAAAATGGAAGTGGAAGGATAAGCAATAGCATAATTAGGTCTAATTCGACTGGTAGCCGT AACAGTCAAGGCAGAAATGGAAGTGGAGGGATGAGCAATAATATGATTAGGTCGAGTTCGAATGGTAGCCGTAACAGTCA GGGAAAATATGGAAGTGGAAGGATGAGCAATAACATGATTAGGTCTAATTCGAATGGTAGTCGTGGGAGTGTCATTGACA GGGGTGTCCCTTATAATATGTACTCTTCAAAGGTATCAAGAGATAGTGGACAAAGAGGAGGGATGAGCAAAAACATAATT AGGTCTAGTTCGAATGGTAGCCGTGGGAGTGTCATTGACAGGGGTGTCACTCATGATTTATACTCTTCAAAGGTATCAAG AGATAGTAGACAAAGAGGAGGGATGGGCAATAACATCATTACGTCTAGTTCGAATGGTAGCCGTGGGAGTACCATTGACA GGGGTGTCACTCATGATTTATACTTTTCAAAGGTATCAAGAGATAGTAGACAAAGAGGCCACAACATGGGTGGAGATAAA ATAGTAGCAAGCAGAAAAGTTATGGATAGAGGGCTTGAAAGAAAACATATTGAATCTGAGAGTTTGGTAAATAGAAATGG GCGGGTGAGCAGTAAGCGTTTCCTCGATAGGGGTTATGATTCTGACAATTTGGAAGTGGAACGAGCTGCATTCAAGAATC TTGAGGACCCAAAAAATGTTATCAGCAAGAAACAATTTTCACATAAGGAAATGGAGGAGAAAATTCAGACGCTAGCCAAA TCGTTGAATGGTGCAGATATCGGTTTACCTGAATGGATGTTTTCCCAGATGATGAGAAGTGCAAAACTCAAATTTAATGA CTATTCGATAACCAGGGTTATCATACTCTTGGGAAATCTAGGAAACTGGCGTCGAGTGGTACAGGTCATCGAATGGCTTC AAAGGCGTGAGCGTTTCAAGTCCTATAAGCTAAGGCATATATATACTGCTGCTCTTGGTGCACTTGGGAAGTCGAAGAGA CCCGTAGAGGCACTGAATGTATTTCATGCTATGCTGCAACAAATGTCCTCATATCCTGACTTAGTAGCTTATCATAGTAT TGCTGTTACTCTAGGGCAAGCAGGGCACATGAAGGAACTCTTTGATGTGATTGATATTATGCGATCACCACCAAAGAAGA AGATCAAAACAGAGATATTTGAGAACTGGGACCCAAGACTGGAACCAGATATTGTAGTCTATAATGCTGTCCTTAATGCC TGTGTTAAGCGGAAGCAGTGGGAAGGGGCCTTTTGGGTTCTACAGCAGTTAAAGAAACAGAACCTACAACCTTGTCCTGC AACTTATGGCCTAGTTATGGAGGTGATGTTTTCATGTGGCAAGTACAACTTGGTTCATGAATTTTTCAGAAAACTTCAGA AGTCTTCTATTCCCAATTCATTAACTTATAGAGTTCTCGTGAATACGTTTTGGAAAGAGGGGAAAACTGATGAGGCCATA TCAGCTGTCCAAGAAATGGAAACACGTGGAATTGTAGGTTCTGCTGCCATTTATTATGATCTAGCTCGATGCCTCTGTGC AGCTGGAAGAGGTCGTGAGGCACTGATGCAGATAGACAAGATATGTAAGGTTGCAAATAAACCACTAGTAGTAACCTACA CTGGTTTGATGCAAGCAAGTCTAGACTCTGGAAACATTCAAGATGGGGCTTATATTTTTGAGAAAATGAAGGAAATTTGT GCTCCGAATCTGGTTACTTATAACATAGTGCTGAAAGCTTACCTGGAACATGGGATGTTTCAAGAAGCTAAAGAGTTGTT GGAGCAAATGTTGGAAAACACAAATCATCTGAGGGAAAAAACTGACAATAAGATGCGGGTGATACCAGATATATACACAT TCAATACCATGTTAGATGCATGTGTTGCAGAGAGGAGATGGGATTATTTTGAGTATGTCTATCAAAGGATGTTGTACCAC GGTTACCACTTCAATCCAAAACGACATCTTCGAATGGTACTGGAGGCTTCAAGAGCTGGAAAGGAAGGGCCATTGGTGAT AACATGGAAGCACTTGGCCGCGACAGATCGACTTCCGCCAGTTTCTCTGGTCAAGGAGAGGTTCTGTGTGGAGCTTGAGA AACATGACCATGTTGCTGCTCTCACATGTATCATCAACTATCCCCCAAAAGATTTGGAGCCATTCTCCAAGTCTTCATGG TTGAGTCTGTTCAAAGAAAATTCTCAGAGGTATCAGAAGGACACAATTGTTAGACTAATAAATGGGGCTAGCAATGTCGT TTCCAATAGTAGCTTGCCAAATCCAATACTTGTGTGTTTAATGCAATCATGCAAAGAATTTTTTTTCGCCACTGATGTTA GTGGAGCTGACATGGATTCAGTGAAAAATGTATTTGCAGTAGATAGTAAACTAGCGGTAGCCAAAGATGATCCAAAACTT TGTAATATAAACTCAACCAAAATCCAATGA
Protein sequence (LotjaGi3g1v0543600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGVVCFEINGNSASALHYVSNSFSSYAVPISSRPFFGNALSVRVGRKFQVSHTRKLNIGPVMVSLNGGSGSNAGSVSEVL RLKDMEFKPSFDEYLKAMESAKTGRGKKHAATQTQKKMKMGVDDGNKIFKRVGEKIDKKDDFEDVGLRVDEAVMDKEGSS TSHGKLRGGFKKEFDGKESNLDVKAKQKHGANMRQGEWLKRQSHSLGSESDDRSVVKRRGENGSGRISNSIIRSNSTGSR NSQGRNGSGGMSNNMIRSSSNGSRNSQGKYGSGRMSNNMIRSNSNGSRGSVIDRGVPYNMYSSKVSRDSGQRGGMSKNII RSSSNGSRGSVIDRGVTHDLYSSKVSRDSRQRGGMGNNIITSSSNGSRGSTIDRGVTHDLYFSKVSRDSRQRGHNMGGDK IVASRKVMDRGLERKHIESESLVNRNGRVSSKRFLDRGYDSDNLEVERAAFKNLEDPKNVISKKQFSHKEMEEKIQTLAK SLNGADIGLPEWMFSQMMRSAKLKFNDYSITRVIILLGNLGNWRRVVQVIEWLQRRERFKSYKLRHIYTAALGALGKSKR PVEALNVFHAMLQQMSSYPDLVAYHSIAVTLGQAGHMKELFDVIDIMRSPPKKKIKTEIFENWDPRLEPDIVVYNAVLNA CVKRKQWEGAFWVLQQLKKQNLQPCPATYGLVMEVMFSCGKYNLVHEFFRKLQKSSIPNSLTYRVLVNTFWKEGKTDEAI SAVQEMETRGIVGSAAIYYDLARCLCAAGRGREALMQIDKICKVANKPLVVTYTGLMQASLDSGNIQDGAYIFEKMKEIC APNLVTYNIVLKAYLEHGMFQEAKELLEQMLENTNHLREKTDNKMRVIPDIYTFNTMLDACVAERRWDYFEYVYQRMLYH GYHFNPKRHLRMVLEASRAGKEGPLVITWKHLAATDRLPPVSLVKERFCVELEKHDHVAALTCIINYPPKDLEPFSKSSW LSLFKENSQRYQKDTIVRLINGASNVVSNSSLPNPILVCLMQSCKEFFFATDVSGADMDSVKNVFAVDSKLAVAKDDPKL CNINSTKIQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 27 | 1014 | 988 | 0.0 | – | |
| PANTHER | 27 | 1014 | 988 | 0.0 | – | |
| MobiDBLite | 156 | 195 | 40 | - | – | |
| MobiDBLite | 156 | 372 | 217 | - | – | |
| MobiDBLite | 204 | 220 | 17 | - | – | |
| MobiDBLite | 223 | 290 | 68 | - | – | |
| MobiDBLite | 302 | 331 | 30 | - | – | |
| MobiDBLite | 347 | 372 | 26 | - | – | |
| Gene3D | 491 | 661 | 171 | 9.3E-21 | ||
| ProSiteProfiles | 506 | 536 | 31 | 5.283 | ||
| ProSiteProfiles | 544 | 574 | 31 | 6.654 | ||
| Pfam | 547 | 573 | 27 | 0.23 | ||
| ProSiteProfiles | 580 | 610 | 31 | 6.27 | ||
| Pfam | 629 | 673 | 45 | 8.0E-8 | ||
| ProSiteProfiles | 630 | 664 | 35 | 11.367 | ||
| TIGRFAM | 632 | 664 | 33 | 5.5E-4 | ||
| SUPERFAMILY | 636 | 832 | 197 | 7.33E-9 | ||
| Gene3D | 662 | 762 | 101 | 1.3E-14 | ||
| ProSiteProfiles | 665 | 695 | 31 | 6.193 | ||
| ProSiteProfiles | 699 | 733 | 35 | 9.953 | ||
| Pfam | 702 | 731 | 30 | 0.013 | ||
| TIGRFAM | 702 | 733 | 32 | 0.003 | ||
| ProSiteProfiles | 734 | 768 | 35 | 6.314 | ||
| Gene3D | 763 | 924 | 162 | 3.2E-23 | ||
| Pfam | 768 | 814 | 47 | 5.9E-9 | ||
| ProSiteProfiles | 769 | 799 | 31 | 6.719 | ||
| ProSiteProfiles | 803 | 833 | 31 | 11.005 | ||
| TIGRFAM | 805 | 833 | 29 | 8.3E-7 | ||
| Coils | 820 | 844 | 25 | - | – | |
| ProSiteProfiles | 850 | 884 | 35 | 9.394 | ||
| TIGRFAM | 852 | 878 | 27 | 2.9E-4 | ||
| Pfam | 852 | 881 | 30 | 0.1 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi3g1v0543600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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