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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0032800 |
| Transcript ID | LotjaGi4g1v0032800.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | tRNA (guanine(37)-N1)-methyltransferase; TAIR: AT3G56120.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|F6HH45|TRM52_VITVI tRNA (guanine(37)-N1)-methyltransferase 2; TrEMBL-Plants: tr|A0A0B2Q1C8|A0A0B2Q1C8_GLYSO tRNA (guanine(37)-N1)-methyltransferase; Found in the gene: LotjaGi4g1v0032800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:4005199..4009547) extracted from Lotus japonicus Gifu genome v1.2.
TTTCCTAATAGATATAGATAGATGGGTCAAAAGTACATTGTGCAACTTTGCAAAACCAAAAACTTAGACTAATCCCTAGC TATCTGTATCGACTCAGACAGACACTGCCGCCGCCGGCGTCGAACTTCACCGTCGACCAGAAGCACAGGCTCGTTTCTCA TTCTCTTTCTATTCTTCATTCCCCGTACCGCATGATCAATTGTGTGTTTGTGCTTGTTTCCTATGGACTGTGATGTTTAT GTAGTTTTCTTGCTTTGCTTGCAACCCCACCATCAATATGCAATATCAGTTTCCAACACTTCAACTAAGCCCTCATCTGC TTCATATTACAGTTACCCACATCACAAAGTTGCTACATTTGTTTGTCTTAGGATTAGAATTTCAGGATCTTATATATAAT CGGATCAATTATATATTAGTGACTCGTTAGTTCAACCATTGACCCTATGACCTCATTTACTGGTTTGAGTTGTATAAAAT TAATGCTACCTAATGTTGGACTTATAGGGTTCTTGAAGCATTGCATGGTGTGAATGTGATGTTGTTGGACGAGAGTAAAT TTGATGTACAATTGAAATTGTGGGCCCTTAGGATACCTTGCCAGCACTGCAGGGCTGCCACTCGGATCCTCAATGGGTAT CTTACTCTCCATTCTTTATATGTGGACGATATTCATGCCTCCCCGCTAATTTCAGCTTCATGGATTGTGCAGTTACTTGC TGGATAAGCCCCGAGTTAAACCCATTACAGAGGACCCAACATGTGATAAAAACCGGTACCTTATACTCTCCGAAAAAGTT CACAATCAAGGTTTCAATTTTCACATCTATGGAACATCTTTCATTTTTCTTTTAATAATGAATCCATGGCATAGTATTTA TAGTTTCAGTGGACATTCTTATCTCTGACTATCAACTTGATTTGGATTTTGAGCAGGGTTATCTGATATTCCGAAGCAAA AGCTTGATGAGCTTAAGGGCTTGTGTGAGATTGAAGTTCTTCCCTATTCGTTGACACTAGGCTATTCATATTGGAATGCA GGTGGGGTGCATTGTTCTCTTCAAGCATGCTGCAAAGACTGCCTTTTTTAACATGATTTCTGGATGTTGGCTTGCTAACT ATGCCATTTTGTTAGAAGCACTCTTTTTGTGATGATTCATTTGTTTCTTACATTATGCACTCCTCAGTCTTAGAAATATC TCTGACTAATTATTGTGTTTGTAGATCATGTGCTGAAGCAGATTCTGCCTACCGGAGTGGAAGTGCCTTCATCTTTTGAA ACAATAGTTAAGTATTTAAAATTTGTATACTTTTTTTTGCGTGGCATCTGTACTTTATTATTTTATTTACTCTCTGTGGA TTACTTTTATTCCCACTTTTTATAACTGTTACAATTTGTTTAATGTGACTTTTGGATTAATTCGATACATGTCTTTTATT AATTCTTCTATGCTGATTCCTTCAGGGGGGGGAGGGCAGTGAGCTTTCCAATTTTGGTAACAATTAAATCTGTTTAGTAA GCTACTTACTGAAAACTAACAACTATCCTACCTATGCAGGTCAAATTGCCCATTTAAACCTACATGATGAGTTACTTCCC TACAAGGATGTTATTGCAAAGGTTATCTATGATGTACGTATGACTACTTTAAATGTTTGTGTTTTAGTTTTAAACCTCCT TTGATGCTGCTGCCTTATTTTAGTTCTGTTATGCTGGTATATCTGGAAAAAATTGAATTATGTTATAAAGGTTATGTTAT TGTGTGACTGTGTGTGTTTATGTTTGACACTATTGCCCTTTGCTATAAAGATGTCCATTTAAAGATTCATTAACAAACTC TATCCTCACATGTTTCGCCTAGTAATTCTCACATTTTCACTATTTGTGCAGAAAAATTATCCAAGAATCAAAACTATTGT TAATAAAGTTGGAAGCATTACAAATGAATTTCGTGTGCCAGAATTCGAAATTTTAGCTGGAGAGCATAATATGGTTACAG AAGTGAAGCAATATGGCGCCACTTTTAAGCTTGACTATAGTTTGGTTTACTGGAATTCCAGATTGGAACATGAACACAAA AGGTTAGTTTCAATGTTCCAAATGGGAGAGATCATTTGTGACATGTTTGCTGGTATAGGTCCTTTTGCCATTCCTGCAGC ACAAAAGGGGTGCATTGTCTATGCAAATGATTTAAATCCAGATAGCATTCACTATCTTAAGGTTAATGCTAAAATCAACA AGGTTGATGATCGCATTCATGCATACAACATGGATGCTAGAAAGTTCGTCTCCCAGCTGATGGAACAGCCAAATTCTGAT AGTAAGTTAGAATATGTTGTTCCCATTTCAGATAGTTGTCACCCATGCAAGATACAAGACAATACTGAATCAAATTCAGA AAATGAGTTGCTAACTGGTAACATGTTTATGGTAAATAACTGCAAGTATCTATAATTGTGATATGAGAATATGTACTTAA CACTACTATTCATGTTGCAGTTGACTCAAAAAAACCAGGAGACTGCAATAACAGTAGTTTAGAGGATGTACAAGGTTCAG CAGAGCATGCTGCTGCATCTGTAATTGCTCTTAAAAGATCTTGTGATTCTCATGAAGGTATTCTGCAGACTACAATAACA CATCAGACTGCCACTACAAGTATCTGTTACCTGATCTGCTAGCTTGTCAAAATTTTCTAAATTAAGTTCTGTATTTAAAA GACACAACTTTTTTTATAGCAGTCTCCCGTCTTCTGAGAAAACAATACAACATTGATAACTATGCTCTGTATGGTCGAAC GTAAAACTAAATGTAAAATATTTTCCTTTGACAGGGAATGGAAAGGCTCATGGCACGGGCATCCTTGAAGATGGTGGGAA AAAAGGAAGCACAAACAAGAGGAGGAAAGCCTCTGAAATCACTGACACAAAACCTTGGGAACATATTGACCACGTAATAA TGAATCTACCAGCATCTGCTGTTCAGTTTCTAGGTACAATGCCATTTGATGTGATGTGACTATTTTCTCTTATAAGTCAT TTGGCCATTTAGTTACTTAGTTGAGACCCTTATTTTCTTCGTCATTAGGAGGATTCAAACGTATCCTTTGCATAGTATAA AAACTGCAGGTTTAAGTATAGAACTTTGACTTATATATGTTTTGATATGACTTGTATATTATTTTCTATAATCAAATTTG GTGAGATTCTAAGGCTTCATTTTGTCAGGGATGGTCCCGTTCATTGTTTTTCAGTTCTAAATTTTTATTTTAAATGAACG CTATCAAAATCTAAACCGAGAATCATTCATTAAATTTTTTCATAGCAAGAAGCCATTGCAATGTGGTTGAACACATTCAT ATTCCTTTACTCAACTCTTATTTTATTTCCATTTTAAGATATATATATATAGGCTGATATCTGACTGCATATATGCCCTG CCAGATGCATTCAGGGGATTAATCCAGAAGAAAAATTGGAAAGGATGTCTACCATGGATCCACTGCTATTGCTTCATTAG GGCAACTGAAACTCCTGAGTCTTTACTAGCTGTGAGTTCATTCTGCTAATGTTGTTTCATGTTTTCATTTTACCATGCTA TGGTTACGAAGTATCAATGACTTCACTGATATGTGGAATTCAAAATCTTTTGTTCATCCTGATGACAGTTAAATGAACTT TATCTTGCAGGAGGCAGAATCTCGTATAAATGCTCGTATACTAGACCCAATATTTCATAGGGTTAGGGATGTTGCTCCAA ACAAGGTACCATCTGTAATTAAGTTTCATCAATAGATCATTTTGGTAGCTTCCTTTATTATTCTAGTTTATTTGTAGAAC ATGGATAATTAACTCCTTGTGCTCTTGCGTTTTATTCACTGTGCAGGCAATGTTTTGTTTAAGTTTCAGGTTGCCAGTAG CATGTGTTAGTGAAGATAGTCAATAACACTGTCCTTGGTGATTCTGGTGGCTTGAAATTAGCTTCTTTTATTTTACTACC CCTTAGTTTTCAGGGTTTGACGGGGCCATGCCTGTGCTTGGACGGATTAAATGCCAATATTGTATCTGACTCAAAGATAA GCACTGTGAAAACGTTAAAAATTAGCTAAGGCTACAGGCCTTGTTCTTTGAAGCTTCGAAGGGAATTCGTTGCTCTTGAG ATGTATGTATTGTATTCCGATGCTTGAAATGAAATATTTGAATCTAGTTATGTTTCAAACCAGAAAATGCCCAGCTGACT TTCGAGCTGCGTTTGGTACTTCTTTCCTTGGAATATATTCAAGGAATGATGATACTTTTGCCTATGCATTGTAAGGATTG TTTCTTTTGTTTTTGGTTGATAGCGTAAG
CDS sequence (LotjaGi4g1v0032800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTGTTGGACGAGAGTAAATTTGATGTACAATTGAAATTGTGGGCCCTTAGGATACCTTGCCAGCACTGCAGGGCTGC CACTCGGATCCTCAATGGTTACTTGCTGGATAAGCCCCGAGTTAAACCCATTACAGAGGACCCAACATGTGATAAAAACC GGTACCTTATACTCTCCGAAAAAGTTCACAATCAAGGGTTATCTGATATTCCGAAGCAAAAGCTTGATGAGCTTAAGGGC TTGTGTGAGATTGAAGTTCTTCCCTATTCGTTGACACTAGGCTATTCATATTGGAATGCAGATCATGTGCTGAAGCAGAT TCTGCCTACCGGAGTGGAAGTGCCTTCATCTTTTGAAACAATAGGTCAAATTGCCCATTTAAACCTACATGATGAGTTAC TTCCCTACAAGGATGTTATTGCAAAGGTTATCTATGATAAAAATTATCCAAGAATCAAAACTATTGTTAATAAAGTTGGA AGCATTACAAATGAATTTCGTGTGCCAGAATTCGAAATTTTAGCTGGAGAGCATAATATGGTTACAGAAGTGAAGCAATA TGGCGCCACTTTTAAGCTTGACTATAGTTTGGTTTACTGGAATTCCAGATTGGAACATGAACACAAAAGGTTAGTTTCAA TGTTCCAAATGGGAGAGATCATTTGTGACATGTTTGCTGGTATAGGTCCTTTTGCCATTCCTGCAGCACAAAAGGGGTGC ATTGTCTATGCAAATGATTTAAATCCAGATAGCATTCACTATCTTAAGGTTAATGCTAAAATCAACAAGGTTGATGATCG CATTCATGCATACAACATGGATGCTAGAAAGTTCGTCTCCCAGCTGATGGAACAGCCAAATTCTGATATTGACTCAAAAA AACCAGGAGACTGCAATAACAGTAGTTTAGAGGATGTACAAGGTTCAGCAGAGCATGCTGCTGCATCTGTAATTGCTCTT AAAAGATCTTGTGATTCTCATGAAGGGAATGGAAAGGCTCATGGCACGGGCATCCTTGAAGATGGTGGGAAAAAAGGAAG CACAAACAAGAGGAGGAAAGCCTCTGAAATCACTGACACAAAACCTTGGGAACATATTGACCACGTAATAATGAATCTAC CAGCATCTGCTGTTCAGTTTCTAGATGCATTCAGGGGATTAATCCAGAAGAAAAATTGGAAAGGATGTCTACCATGGATC CACTGCTATTGCTTCATTAGGGCAACTGAAACTCCTGAGTCTTTACTAGCTGAGGCAGAATCTCGTATAAATGCTCGTAT ACTAGACCCAATATTTCATAGGGTTAGGGATGTTGCTCCAAACAAGGCAATGTTTTGTTTAAGTTTCAGGTTGCCAGTAG CATGTGTTAGTGAAGATAGTCAATAA
Protein sequence (LotjaGi4g1v0032800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLLDESKFDVQLKLWALRIPCQHCRAATRILNGYLLDKPRVKPITEDPTCDKNRYLILSEKVHNQGLSDIPKQKLDELKG LCEIEVLPYSLTLGYSYWNADHVLKQILPTGVEVPSSFETIGQIAHLNLHDELLPYKDVIAKVIYDKNYPRIKTIVNKVG SITNEFRVPEFEILAGEHNMVTEVKQYGATFKLDYSLVYWNSRLEHEHKRLVSMFQMGEIICDMFAGIGPFAIPAAQKGC IVYANDLNPDSIHYLKVNAKINKVDDRIHAYNMDARKFVSQLMEQPNSDIDSKKPGDCNNSSLEDVQGSAEHAAASVIAL KRSCDSHEGNGKAHGTGILEDGGKKGSTNKRRKASEITDTKPWEHIDHVIMNLPASAVQFLDAFRGLIQKKNWKGCLPWI HCYCFIRATETPESLLAEAESRINARILDPIFHRVRDVAPNKAMFCLSFRLPVACVSEDSQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 456 | 454 | 9.5E-173 | – | |
| Hamap | 3 | 453 | 451 | 26.593 | ||
| PANTHER | 3 | 456 | 454 | 9.5E-173 | – | |
| Gene3D | 99 | 176 | 78 | 6.8E-24 | – | |
| SUPERFAMILY | 113 | 452 | 340 | 3.22E-67 | ||
| Pfam | 117 | 402 | 286 | 1.4E-67 | ||
| ProSiteProfiles | 118 | 453 | 336 | 111.789 | ||
| CDD | 221 | 286 | 66 | 1.17475E-4 | – | |
| MobiDBLite | 285 | 304 | 20 | - | – | |
| MobiDBLite | 326 | 357 | 32 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | TRNA (guanine-N1-)-methyltransferase activity | Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing N1-methylguanine. | ||
| Biological process | TRNA methylation | The posttranscriptional addition of methyl groups to specific residues in a tRNA molecule. |
Expression pattern of LotjaGi4g1v0032800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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