Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0036300 |
| Transcript ID | LotjaGi4g1v0036300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ABC transporter G family member; TAIR: AT1G17840.1 white-brown complex-like protein; Swiss-Prot: sp|Q8RXN0|AB11G_ARATH ABC transporter G family member 11; TrEMBL-Plants: tr|G7JCQ3|G7JCQ3_MEDTR White-brown-complex ABC transporter family protein, putative; Found in the gene: LotjaGi4g1v0036300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:4379060..4384824) extracted from Lotus japonicus Gifu genome v1.2.
GCTTAAAGAGACTAAATATTTTATTTCCTCTTGTATTTCTTTTCTTTTTCTTAAAAAACTTCAATATCACACACTTGAGG GACGACTAGGTGGCAACTGAAAAAGAAACTTCAATATGTCCACCATTATTTAGACCAATTTGAGATCATTTGAGATGTCC TCCGCGTATTAATTATAGTATTAGAGTAGCCGCCTTGAAAAGCACCTACGTAGTTGACCGAAAAAAGAGGCCACCGAGCT TTACTCTAAAATTAGATTATGGTCCCAAAATTTATTGATAAACTGCTGCATCTAAGAAGAGAAACATGTGAATAGATACA AAAACTGACCATACAAAAAGTTCTATATACATATATATTTGGCTCTTGCCTTCAGGAAAATTCAGTACTTGAGTCATTCT ATTTCCACCTCTCATATCTCTCAATAATGGCTTCCCTTATTCCACATGGTCCTATTGATCATGAATTTAGACCGAACTCA GCAATACCACAGAAAACTCTCCAAGACATTGAAGCCAATACTACTATACTGGAGATAGAAGCATCATCCAATATTAATGC TTCGAAAATGATCAATGGAGGAGGAGAAGCTTCAGGTTGGAATCAGAAGAAAGAGATGGGTATGTGCTTGACTTGGAAGG ATCTATGGGTGAGTGCCTCCATGGGAAAGCATGGAAGCAAACCAATTCTTCAGGGTTTAACTGGTTTTGCCAAGCTAGGT CAGCTCTTGGCCATAATGGGTCCTTCTGGTTGTGGGAAATCTACACTTCTCGATGCTCTGGCAGGTATGCATATTAAAAC CAAGCTTCAAAATGCTCTCCCCATTCTTAAGGGTTAATAACATTCTCTTTAACACTATCATATTAATTCGTTAAAATTCA CGTGACTTTCACTATATTAGAAGTGAAATCCATGTTTTTAGTAAATACCATATGAATTTCAATTAATAAATGAGAGGATA AATAAGGTGTTGCAAGTATATTTTTCATCTTTGTAATAGCATGTTAAAAGGTTGATTAAATGATCCATGTTAAATATTTA ATTGTGTATATTTTTGGCTTTGCTACGCATGATTTCCATGTTAAAATGATTTGTGTGTAAATTAATTTTAGTATATAGGA AACGTATTGTAAATAATATGTATTGAATGTTAGTTATAAAAACATGGTTTATGGGTGGATCAATTTTTAACATGACCCAT AATAAATGAGTTGAAATTTATATAATTTATTTATTTATAAGAAATCCTATTGGTCTATTGATTTGTAGGTTATTTAACTC AAACTTTCTCATGTGTCATTTAAACCACCCATGTTAAAAATATAGGACAATTCTACGTGGGTCATGTTAAAAACTGGTCC GCCCATAAACCATGTTTGTATAACTAACCTTCAATACATACTTTTTTTTATAAGCAAATGTTATTTGTTAGTAAATTAGT ACAAATTATTCCTCCTCATGGTTCGAACCCTGACCCTTCACTTGCAATTACTCTTAGCTCAACCATGTGAGCTACACACC CCACCCAAATTCAATACATACTATTTACAATATTTTTCTTATATGCTAAAACAGACAAATCATTTTTTTGTTGTCAAAAC AAATCATTTTAACATGGAAATCATGTCAAGACAAAGCCACAAGAAATTTAGTTCATAGAGTTTTTTTTGGTACAAGAAGT TTGCAGGGATTTATGCAAATAAAATTACCCTATAATTTTACAAAATTAACATGAAAACCTGTTACTTGAATTTTAAAATA AAAAGTTATGCTTTCAAAACTTTATTAGGTTTCTTTTTTAAAGAATATTACTGAATTCCTTAAAAATAATAAATCAGAAA TTAAAGATAGTAATTGTAAATGATATATACTAAAAATTTCAAAAAAAAATATACACCCAGGCAACTATCATTTTTTATGA GAGGAGCCCAAGGTTTTTTTTTTTGAGAAGAAATTGTAAAGAGGATCCCAAGGTTATATATGCTAATTCTATTCCACCAT CCAAACCATGTAGCGGAAAATTTGGGAAATATTAAAAGAATGAAAATAAACAAACTGCTTGCACATGAAATAATAATTTG GTTGAATAAACTAAATTATGAAAAGGGAAGCTGTGTGAAATTAGAAAACCAAAAGTCAATATATATATATAGTTATATGC CACCTTCATGATTTCTTAAGCAGTGGCGTGTTCACCTCGTACAAACGCGTTATTATACTACTATGTTCACATCTTACTAC AAAATTCAACAAACATCATTGTCAATGAATGATCAAGTTCACATAGATTCAAAGAATGATGATCAAATCATTTGTACAAA ATTCAACAAACAGCATTGTCTTGGGTGGGAAATCTGAGAAGGAAACACTTCTTTCTAATAATGTTAGTGCAATTCTTAAA GAGATTCCAAGGTAGAGATATCTAGCTTTAAACAGATTAAATGATGATATGAATTCATATATATATTTCAGGGAGATTAA GTTCAAACACAAAACAAACAGGGGAGATTCTGATCAATGGTAACAAACAAGCACTGGCTTATGGAACTTCGGTATATATA TCTTAAAGTCTGCAATAAAAAAATCAATTTGAGAGTAGCCATATGAATGATCAATTAACTATTCTTACATGAATCTATGT GATTGTGATCACAGGCATATGTGACACAAGATGATACCTTAATGACAACCTTAACAGTAAAAGAAGCAGTGCATTATTCA GCTCAACTTCAATTGCCTGATTCCATGTCCAAGGCAGAGAAGAAAGAGAGAGCAGAGTTTACAATCAGAGAAATGGGTCT GCAAGATGCCATTAACACACGAATTGGAGGTTGGGGAATTAAAGGAATTAGTGGCGGTCAGAAAAGGCGCGTTAGTATCT GCATAGAGATTCTAACTCGCCCTAAACTTCTATTTCTTGATGAACCAACTAGTGGATTGGATAGTGCAGCTTCCTATTAT GTCATGAAAAGAATTTCCACATTGGATAAAAAAGATAGCATTCAGAGGACTATTATTGCCTCAATTCATCAGCCTAGTTC AGAAGTTTTTCAACTCTTCCACAACCTTTGTCTTCTATCTTCAGGCAAAATAGTTTATTTTGGACCTGCTTCTGCTGCAT CTGAGGTTAGTAACTAAACTAGCCCCATTTTTCAGATTTGGGTTGCCTGTAGTCAGGATTACCCTACATTCACGCATTCA CGACATTTGGACCGTACAATTAAGATCAGTCGACTTATATTTTTAATCAAAATCGGACGGTAAACATGTCTTAAAATTCA AATCGTCCAATCAAAATTGAATGGCTTAGATTGACTGAACGCATGGATATGGGGATTCTCGACTGACTTCAGGGAATCCA TTTTCATTTCCTAGTCCCTCATCCAAAAGTTTTACTTTTCATTTCTAGCTATGATGTTTCACTTCTAACTCTACTTTCAT TTCAATGTAGTTTTTCGCTTTAAATGGTTTTCCATGTCCTACTCTCCAGAATCCATCAGATCATTTACTAAAGACTATAA ACAAGGATTTTGAACAGGTAAGCTGACTATGAATCAAAGACATTGGTGCTTTTAAAGTGATTTCATTAATTTTCAGTGCA ACATACTTGTCCATAATAGTTCCCAACAAAACTCATAAAATTCATACATTTCAGGATGTTGAGGTTGGTTTAGAAGGGAC TGGAACTATACCCACAGAAGAAGCCATTCGTATCCTTGTGAACTCATATAAGTCATCAGATAGGAACCAAGATGTTCAAA GTGAAGTATCAGTATTATCTGAAAAGGTATCCTTTCTTGCTAACTATATCACATAGCAAATCCATAAAATTTGTTCCAAA GTTAATTGTAAAATGATATCATTAAGCTTTCATGTGTAATTTTCAGGACAAAAGTTCAGCATACAACAAGAGAAGGCATG CTAGCTTCCTTAATCAATGCATAGTTCTTACAAGAAGATCGTCAGTTAACATGTACCGTGATCTAGGCTATTACTGGTTA CGCCTTGGCATCTATATTGCCTTGGCTATAAGTGTAGCCACTCTCTTCATAAATCTGGATAAAAGTAATGGCTCAATTCA GGTGACAAAACCTAATAACTTGCACAACTTTAATTAATTTTAAGTTTAGCTAACGTCTTCTAATGCTTCAGTCATTGTTG GTTATTTCAGGATAGAGGTTCACTTCTTATGTTTATTTCTTCATTCTTTACTTTCATGACCATTGGTGGATTCCCTTCCT ATGTGGAGGACATGAAGGTAATCCAAAGTTTCAAACTTATTTTCTTCTGGAGACACCCGACATACACACAATTTTTCTTG CTATCTTCTCCTTTTATCACATCCATTATATATCACATCCATTACTTCTCTCTCATTTCCTGCTTTAATACTTTGGATGT TTGTCAGATATCTGTACTATGCAAATTTTTATGAACCATTTTTCTTTTACAAACAAATGTAGTCACTGAATTTTAATTTT AATTTTTTGTTTCCTGCTTTTGATCCAGGTATTTGAACGTGAAAGGCTAAATGGGCATTATGGTGTTACTGCATATGTAA TTGGCAACACTTTTTCATCCATCCCATACTTGTTGCTGGTTTCAATAATTCCTGGAGCTATAGCTTACTACCCTCCTGGT CTCCAGAATGGATATGACCACTTTCTATATTTCCTTGCTGTTCTGTTTTCTTGTCTAATGTTAGTTGAGAGCCTTATGAT GATAGTTGGTAGCATTGTCCCAAACTTTCTAATGGGTATCATAACTGGTGCTGGAATTCAAGGAATCATGATGTTGGGTG GAGGGTTCTTCAAATTGCCAAATGATCTTCCAAACCCATTTTGGAGATACCCTTTGTTCTATGTTGCATTTCATAGATAT GCCTTCCAAGGAATGTTCAAAAACGAGTTTGAAGGACTTAAATTTGCTAGAAATGAAGAAGTTGGTGCTGGTGCCTCATC ATCAAATTACATTAGTGGTGAAGAGATTCTGAGAAGTAGATGGCAAGTGGACTTGAGTTACTCAAAATGGGTTGATCTTG GAATTTTGCTGGCCATGATTGTTCTGTATAGAGTGTTGTTTTTGGTGATCATCAAAACTACTGAGAAGCTGAAACCAGTT GTTCTATCATTCAAATCGGTTTCTCCCAAGAAAACAATGCAGATCATCGAGAATCCTAATGCCACTCCTTTGAAAGATGA GTGTTAGAAGTCTCGCATTAGCTAAAGATAGATAGTCTTTATAAGGATAGTGCAAACCTCAACTCTTGAGCTAGCTTTTG TGGTTGAGTATAGACTTTCCAATTTCTAATAGTGAGGTTTTGTAATTAAGTGCATTCAATAATGTTTGGTCGATGTGGTT TTAACAAGATGAATTTATAACCAAAAGGGGTTTGGCTAGTGGAAGAATTCTAGGTCCGTAAGACTTGAGAGTGTGTATAG AAATACTGATCTATAAGGAGATCCCAACTCTATTCCTTGGAAATATATCCCCTTGGAAACGAGGTTTACGCATATAACTT TAGTCTTTGGGGCTGTAAAGTTCTCTCTAGAGTTGTCGTCATCCAAAAAAAAAAAATCCACATAGATGGTGTTTTGATTT TGCCTGTATGATGTAACATTACTTGCAGGATTGTGATGTAATGAAAGTGTAGCAAAATAATAACGCAAGTAGCTCAAATA AACATTTTATTATTTAGTGTTATTAAAATTGACTCGGCTCATATACATGGTAATGGGTTTGTGACTCAATCAGTGAGTCA GTGGT
CDS sequence (LotjaGi4g1v0036300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCCCTTATTCCACATGGTCCTATTGATCATGAATTTAGACCGAACTCAGCAATACCACAGAAAACTCTCCAAGA CATTGAAGCCAATACTACTATACTGGAGATAGAAGCATCATCCAATATTAATGCTTCGAAAATGATCAATGGAGGAGGAG AAGCTTCAGGTTGGAATCAGAAGAAAGAGATGGGTATGTGCTTGACTTGGAAGGATCTATGGGTGAGTGCCTCCATGGGA AAGCATGGAAGCAAACCAATTCTTCAGGGTTTAACTGGTTTTGCCAAGCTAGGTCAGCTCTTGGCCATAATGGGTCCTTC TGGTTGTGGGAAATCTACACTTCTCGATGCTCTGGCAGGGAGATTAAGTTCAAACACAAAACAAACAGGGGAGATTCTGA TCAATGGTAACAAACAAGCACTGGCTTATGGAACTTCGGCATATGTGACACAAGATGATACCTTAATGACAACCTTAACA GTAAAAGAAGCAGTGCATTATTCAGCTCAACTTCAATTGCCTGATTCCATGTCCAAGGCAGAGAAGAAAGAGAGAGCAGA GTTTACAATCAGAGAAATGGGTCTGCAAGATGCCATTAACACACGAATTGGAGGTTGGGGAATTAAAGGAATTAGTGGCG GTCAGAAAAGGCGCGTTAGTATCTGCATAGAGATTCTAACTCGCCCTAAACTTCTATTTCTTGATGAACCAACTAGTGGA TTGGATAGTGCAGCTTCCTATTATGTCATGAAAAGAATTTCCACATTGGATAAAAAAGATAGCATTCAGAGGACTATTAT TGCCTCAATTCATCAGCCTAGTTCAGAAGTTTTTCAACTCTTCCACAACCTTTGTCTTCTATCTTCAGGCAAAATAGTTT ATTTTGGACCTGCTTCTGCTGCATCTGAGTTTTTCGCTTTAAATGGTTTTCCATGTCCTACTCTCCAGAATCCATCAGAT CATTTACTAAAGACTATAAACAAGGATTTTGAACAGGATGTTGAGGTTGGTTTAGAAGGGACTGGAACTATACCCACAGA AGAAGCCATTCGTATCCTTGTGAACTCATATAAGTCATCAGATAGGAACCAAGATGTTCAAAGTGAAGTATCAGTATTAT CTGAAAAGGACAAAAGTTCAGCATACAACAAGAGAAGGCATGCTAGCTTCCTTAATCAATGCATAGTTCTTACAAGAAGA TCGTCAGTTAACATGTACCGTGATCTAGGCTATTACTGGTTACGCCTTGGCATCTATATTGCCTTGGCTATAAGTGTAGC CACTCTCTTCATAAATCTGGATAAAAGTAATGGCTCAATTCAGGATAGAGGTTCACTTCTTATGTTTATTTCTTCATTCT TTACTTTCATGACCATTGGTGGATTCCCTTCCTATGTGGAGGACATGAAGGTATTTGAACGTGAAAGGCTAAATGGGCAT TATGGTGTTACTGCATATGTAATTGGCAACACTTTTTCATCCATCCCATACTTGTTGCTGGTTTCAATAATTCCTGGAGC TATAGCTTACTACCCTCCTGGTCTCCAGAATGGATATGACCACTTTCTATATTTCCTTGCTGTTCTGTTTTCTTGTCTAA TGTTAGTTGAGAGCCTTATGATGATAGTTGGTAGCATTGTCCCAAACTTTCTAATGGGTATCATAACTGGTGCTGGAATT CAAGGAATCATGATGTTGGGTGGAGGGTTCTTCAAATTGCCAAATGATCTTCCAAACCCATTTTGGAGATACCCTTTGTT CTATGTTGCATTTCATAGATATGCCTTCCAAGGAATGTTCAAAAACGAGTTTGAAGGACTTAAATTTGCTAGAAATGAAG AAGTTGGTGCTGGTGCCTCATCATCAAATTACATTAGTGGTGAAGAGATTCTGAGAAGTAGATGGCAAGTGGACTTGAGT TACTCAAAATGGGTTGATCTTGGAATTTTGCTGGCCATGATTGTTCTGTATAGAGTGTTGTTTTTGGTGATCATCAAAAC TACTGAGAAGCTGAAACCAGTTGTTCTATCATTCAAATCGGTTTCTCCCAAGAAAACAATGCAGATCATCGAGAATCCTA ATGCCACTCCTTTGAAAGATGAGTGTTAG
Protein sequence (LotjaGi4g1v0036300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASLIPHGPIDHEFRPNSAIPQKTLQDIEANTTILEIEASSNINASKMINGGGEASGWNQKKEMGMCLTWKDLWVSASMG KHGSKPILQGLTGFAKLGQLLAIMGPSGCGKSTLLDALAGRLSSNTKQTGEILINGNKQALAYGTSAYVTQDDTLMTTLT VKEAVHYSAQLQLPDSMSKAEKKERAEFTIREMGLQDAINTRIGGWGIKGISGGQKRRVSICIEILTRPKLLFLDEPTSG LDSAASYYVMKRISTLDKKDSIQRTIIASIHQPSSEVFQLFHNLCLLSSGKIVYFGPASAASEFFALNGFPCPTLQNPSD HLLKTINKDFEQDVEVGLEGTGTIPTEEAIRILVNSYKSSDRNQDVQSEVSVLSEKDKSSAYNKRRHASFLNQCIVLTRR SSVNMYRDLGYYWLRLGIYIALAISVATLFINLDKSNGSIQDRGSLLMFISSFFTFMTIGGFPSYVEDMKVFERERLNGH YGVTAYVIGNTFSSIPYLLLVSIIPGAIAYYPPGLQNGYDHFLYFLAVLFSCLMLVESLMMIVGSIVPNFLMGIITGAGI QGIMMLGGGFFKLPNDLPNPFWRYPLFYVAFHRYAFQGMFKNEFEGLKFARNEEVGAGASSSNYISGEEILRSRWQVDLS YSKWVDLGILLAMIVLYRVLFLVIIKTTEKLKPVVLSFKSVSPKKTMQIIENPNATPLKDEC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 408 | 408 | - | – | |
| PANTHER | 62 | 670 | 609 | 5.3E-299 | – | |
| PANTHER | 62 | 670 | 609 | 5.3E-299 | – | |
| SUPERFAMILY | 68 | 305 | 238 | 2.43E-42 | ||
| Gene3D | 68 | 305 | 238 | 5.9E-52 | – | |
| ProSiteProfiles | 68 | 314 | 247 | 17.094 | ||
| Pfam | 95 | 239 | 145 | 1.5E-25 | ||
| SMART | 97 | 286 | 190 | 1.3E-11 | ||
| ProSitePatterns | 211 | 225 | 15 | - | ||
| Pfam | 393 | 604 | 212 | 2.2E-34 | ||
| TMHMM | 409 | 431 | 23 | - | – | |
| Phobius | 409 | 433 | 25 | - | – | |
| Phobius | 434 | 444 | 11 | - | – | |
| TMHMM | 444 | 466 | 23 | - | – | |
| Phobius | 445 | 466 | 22 | - | – | |
| Phobius | 467 | 486 | 20 | - | – | |
| Phobius | 487 | 510 | 24 | - | – | |
| TMHMM | 487 | 509 | 23 | - | – | |
| Phobius | 511 | 521 | 11 | - | – | |
| Phobius | 522 | 543 | 22 | - | – | |
| TMHMM | 522 | 544 | 23 | - | – | |
| Phobius | 544 | 549 | 6 | - | – | |
| TMHMM | 549 | 571 | 23 | - | – | |
| Phobius | 550 | 571 | 22 | - | – | |
| Phobius | 572 | 643 | 72 | - | – | |
| Phobius | 644 | 665 | 22 | - | – | |
| TMHMM | 647 | 665 | 19 | - | – | |
| Phobius | 666 | 702 | 37 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. |
Expression pattern of LotjaGi4g1v0036300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…