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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0044400 |
| Transcript ID | LotjaGi4g1v0044400.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Branched-chain-amino-acid aminotransferase; TAIR: AT1G50110.1 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; Swiss-Prot: sp|Q9LPM9|BCAT6_ARATH Branched-chain-amino-acid aminotransferase 6; TrEMBL-Plants: tr|A0A151SI87|A0A151SI87_CAJCA Branched-chain-amino-acid aminotransferase; Found in the gene: LotjaGi4g1v0044400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:5235195..5243157) extracted from Lotus japonicus Gifu genome v1.2.
TTGGTCATGGAGACCTCCCATCTACCAGCCAGCAATGGTGAAGCTATGAACAGGTTATTGCTCGACAATAAATTTTGGAT TCACGATTTCACGCTATACAAATATCATTGCACGAATTTTATTTTTTTTATAAGCCATGAATTTTATATTGAAATGAAGT ATTAAGAGGCACTTCAACCCAATATAAGAGAATTCACCTTTTGACTTTAAAATTTTGACATGGGCTTTCATTGACGATGA ATAAACCATGCTGACGTTAAGGAATACCAAACCTCCATTAATTGTATACCCTTTTTAATCAAGTTGACGCTCCATTTTAT GTTATGTGATAGAATTTGTTTGCCTATTATAATTTCATAGTCTTCTGGTTCAAAAGCTTTATGCATTACCATCATATATG TTGATTAAAACATGTCATTAACTTTAATTACTAGAAAGTCAAAAATATCATTGGTCTTCATTATTCATATTGCAAAAATT GATAATATACAATGTAAAGATGTGTGGACACCCATTCCACCTCTACCCCAATGAAAGAGCTTGGATGGGAAAAGGGCAAA ATCTTTACATAATGTTAATGACAAAAGGTAATCCAAATATAAAAGGATAGAAATATTTTCTTCTCTTTTACCCTTTCTAA TAAACATATTAGTTAGCTAGTTTACACCATACTAGAAGAGCATATATACAACTAATCCAACTCAATGTTTTTTTTTTTGG TAGGGAGACTGAAGAAAGATTTGCCAATATTGATTGGGACAAACTTTCATATGAAGTTATTCCAACTGATTATATGTACA TTATGGAATCCAATACAGATGGGACCTTTTCAGATGGAGCTCTCGTACCTTTTGGAACCGTTCAAATCAATCCCCATTCT TCTGTTTTAAATTATGGACAAGTAAGCTATATATTGCTTTTAAGTATAGATTAAATAAGAAGTGCGAGACAGAAAGAAAA ATATATATGGTATATATGAGTGTATGTACTATTTAGTATCTACATTTGATAAGCGAAGAAGATTCGGCATTAGTAACTCA TAAGCTAAATATTAATGCTTCTAATTCATCCATTACACTTGGTATTAAAACATTCATATATGCTGACAAGTATACATATA TGAATTATGATGCATGTGCATGTATAATAGGGACTATTTGAGGGCATGAAAGCATACCGAAGACCAGATGGTGAGGTGCA GTTATTTCGACCAGAAGAGAATGCACTGCGCATGCAAATGGGAGCAGATCGGTTATTATTGGCAGCACCTTCCGTTGAGC AATATGTTGATGCTGTAAAACAAGTTGTCCGTACAAACAAGCGTTGGGTATACATTTGTTGTTCTCATTTCTGACTTTTT TTCCTTTTTATTCTTATAGCAAGATTCTAGCATATATCAGTAAAATAGGCAGGTGTATATCATATATAAAAATACCGGTT GGTTCAAGTGTGGTACATGTTTAATTTCTTTTTGAGCAAGATTTTTTATGTCTTTTCTGTCCATATCTCTCTAATGTGCT TGGATAGAATGGGTGTGAAAAATGTACTTTTCCTGTTTTTTCCTAATCTTGAATATTGAGAGTTGTTAACTGGAACTGCA TGCATGTAGGTGCCTCCTCACGGAAAAGGAACATTGTATATCAGGCCTTTACTATTTGGAAGTGGAAGTGTTATGGGTAT CTCACCGGCGCCCCAGTCAACCTTCTTAATATACGCTAATCCAATTTGCAATGTTTACAAGGTAAGTGATCCCCTGCAAA TTTTAACTTTCAACTAAACTAATATGAACAACCAAACAAAGATGATGATGAAAAGTTGAATTGATTGTCAAACATATTGA TTAAACTTTCATAAAAAAACTAAATGGAGAAAGGAAAATAAATATCAGCTAAGTATATATACTATGCCGTTATCTATTGT ACGTACGTAGATCAAGAAAAATTTAGTTCACAAGTTAAAATATCTTCTCTGAAATTAATTTTAGCATATAAGGAGAATAT TAGAAATATAATGTACTAAATGTTAGTGGTGAAAATATGGCTCATGGGCGGGTAAATTTTTAGCATAGTGCACCATATAA TTTCTCATATATTGTTTATATGTTATATTTAATATATATCTACAATCTTTATTTGGACAGGGACGAACTGCAGCCTTGAG TTTGTGGGTTCATGATAAACTTCCTCGCGCATATCCTGGTGGAACTGGTGGAGTAAAAAGTATAAGTAATTATGCACCTG TAAGTTTATCTTAATCTGAATGATAAAATCATTAAGAGATTAATTAGAGGTGGTAATAAGATTAATAACGAATAACTTAA CTTTTTTTCAAACAACAAAAATTGATTCAATAAAATTACAAATTAGATTATCAAAAGGTAGCCCAAAACGGCACCTCTCA TCACAACCTTGTTTCCCTAGGGGTATCGGCTAAGGCATTAGCTTTCTTATAAACGTGACATGCATACATTGCAACATTTC ACTTCCTAGTGAAGCCTATCTATAAGATTCAAGCTATTAATGAGCTTCCACGGTCAGAATGAAACACAATTTACCCACCC AGTAGTCAAAGAAGAGTCGCTTTCAATTGCGATTGATGTCCCTAAAACTAAGTTCTCGCAAAATAAAAGATCGAGCATTC AGAATCCCTAGCACCTCCGCTTCATAGGCCCTCTTCCACCCAACCTGTTTAGAGAAACACCCCACAATTTTTCCTTCCGC ATTCCTTAGCCCACCCCCCAAATTCCACTCACGCTTGGGTTCCCTTTTGAAGCCCATCCACATTGAATTTAAGGATAGAA CCTACTAGAGGCACTCATGATACAAAACGTTGCAACTTTCAATGGGGTGGAATACTAGAGGCACTCATGATACAAAACGT TGCAACTCTCAATGGGGTGGAAATTTGTTGATATCCAAATGATCTGCAACCTGATTCATTTGATTGGGACATTATATTGT TACTTTCTAACTTACTTTGATCCCCCAAGCTAGCCTAATTAATTTTACATTTCAATCACTCTCTCCACAACAAAGTTACT GCCATTAAATATATGATCATATGTTTCTAGCCAAATTTCCCACCAAATAGAGTAAGCTAAGCTACCAGCTTCTAGATTAA ATCAAATGTAGAAACATGATTGTATAACTTTGTGTTATAAATTGGCACTTAAATGAAACAGAATATTAAAATATACATTA TGATAGTTTAATGATGTTCATGTCTATGTTCTCAATTTTTTCAGGTCTTCCAAGTGGTAAAAGAGGCAAAAGAAAAAGGA TTTTCTGATGTTCTGTTTCTCGATGCAGCAGAACATAAATACGTTGAGGAGGTATCTTCATGCAACTTTTTCATTGTTAA GGTAACTAATGTTACATATATAGTAGTATTTTTTTCTTCATCAATTTGAAAATCTTCTAAAATCCATATTTTAAACTCCC CATTTGACTCTTTAATTTCAGCGGAATGTTATTACAACTACACCTGCAACCGGAACTATTCTTCCTGGAATTACAAGGAA AAGTATCATTGAACTTGCTCGTGATTTGGGTTACAAGGTGATTATTACTGATCTTGAATATATAATTTCGAAAGAAAGTA ACATAAATTTCTTGGGCCAGTACTAATCATGTCAAAAAGTTATACTCCTTCCATTTCTAATTATAAGATCTAATACAAAA AATTACGCTTATTAATAAGAAAGGGATTGTCTAAATAACTCATAATATAGTTTGGGTTAAATAATTCATCATCCAATCAC ATTTGAGATAAATGAGTTGGAAATAAATTAATAAATAAAATATACAAATTCCAACTCACTTATCTTCAATGTGATTGGAT GATGGGTTATTAAACCCAAACTGTATCATGGGTCATTTAGACAACCTCATTAAGAAAACATTAAATGTGTCTAATTAGTG TATTGGTTTTTTAAAAATGCATACATTCATGATTCATCCATATTTACCCTTTGTCATTTTCTCTCACTAATTAATGGTAG GTGGTAATTAAAACTTTGGAATTGAAAACACACAATTAATGTGAGGGGTATATATGAAAGAGTAGAATATTTTTTGCTAG ATTATTGTTAAAGGTCTTATATTTAGGAACATAAAAAATTTAAAACTGGGTCTTATAATTAGGAACGGAGGGAGTAGTAT GTTAGTGTACAAGTTTTTAACTTGTTCTGTTATTTTTCGTGAACCAATTATCTCAAAAGCTTATATTATTGGTCAAATGA TACATTAATTATTTTATATTATATTTTTAAAACGCCTCTCACACAATAGATAATTTGGGCTTAAAGCATGATCAATGCAC ATGTCCACCCTACATATTAGAATTAGGGAGACATAACTCAACCAAAAAACTAGCTTAGGAGTTAAGGGTTGTTCTATTCT CTTTTTTTTTGAAAATAGAAATATATATTGATAGATAATAATCGATAGTACAAACATCACATAACAATGTGAGCAAAAGT CCCCCCAATGCTACAAAGCAAATCTAAAAACGAGTTTGTCTCATAAAACATTACAAGGCAACAAACTAACCCAGAGCCAC AATCATAAGGGCCTAGCCCCTAAATCAAGCATTAGCCGACCAACAAGAAAATGCATCCGTCGGGGACCTAGATGCGGCGA GAGGAAGTCTCGCAAACCCATCAAAAACAGATCTGCATCTCAGTATTGAGGAGCACAAATTAGCACAAGACATCGACCAA AGGCAGCAGCAAAACCGAACAATAGTTCCAGGTTATCAAGAACCTCCTACAAACTCTGACTCGGCGCACTCAGAGCCAAC GCCAACTGCCCAACCAACATACCTACATCCCAAAACTGCCAAGGACAACCCATCACACACCAAAAACCCCGAACAAGCTA GGAAAGCACCAGCCTATGCATCCTAACCATTTCAGAACAACCCAAAGCATGTGAATAATAAAAAAATTGAGAGACTTATC CTGGTATTGCAAACACAGCTATGTTCTTTTTCACAGTGACAAAATTCTTGTCTCATAACATATTGGAGGAGAGAAAGAGA TTAGCCTTCTAGGAAGAGATAGTAGGGGACTTAACACGAGCCTCATAACAGCGAGAGTGGAACCTTTCAGTACAACCCAT TCGGACAGAACCTAGAGCATGGATCCTCTTTGACAGAACGCTTCCTCACTCTCTCCCTCACACATAGTAGCATCTGAAAG TTAGAGGCGACGAAGAGCACGACAGAGCAGAGACGTCAAACAACAGAGCTTTTACCCCACAGTAGATCTGGCACAATGAA AGTAGGGGAAGAGGAACCTCTCAGATCTGGAGATAAAAACAAGGGGATCATCAGATGGGAGAAGCACGGCCCAGAACGTC GCTGCCGTGAAAGAGAACAACAAGGGCGGCCACCGCCGCTTATTGAAAGCTAAAGAAAGCAATCGGGGCTCCAAGCACCA TGCGAAACAGGTCACCGAATCTTTGGAAGGTGGAGGAGAAGGAGAAGAGAGGGGAAAGCATAAAACGAAGTTAAGGAATG AAGGGTTGATGTCGCGCATAGAGGCGGCGCGACGACCACCCAAGGGGACTAGGGTTAAGGTTGAGAGAAAGAAAAGAGAA ACGACAAGAGCAGGAACCCGAGCCCACATGTAGGGTTGTTTTATTCTAATCTTTATAAACATTTGTTTAACCATATTTCT AGCAAATGTGAGACTTCTAAAAGCATCTTCAATGGGAGTATGTAATGTCAAATACATACTCCCACCAATATCTATTACCA TTGGAGCATATTTTTAATTTCAACATGGCTAGTGAGGGTATGTGAGAGTGGATACTCAATTTAGTCATGAAAAGTGTGTT TGCATTTATTATTGCTTAATGTAAAAGGTTTAAATAAAACTTGCAATTAATAAAATAATTTTTTATATAAACTTGTAAGA GTTGTTTGGTTGGAGTAAAAGTTAATAAAATGATGTAGATGATGTGGCATTATTGAGAGTTGTAAAAAGTAAAATGTAAA TACTTTAGTGAATATCATGGTTAAAGATGCTCTAATTAATATTTGGAATGTGGAATTAACATCAACGAGTGACCCAATAT GGAAGGTCTCCATAATAAATGGGTCTAACTAGGATATACTCTGATACCATATTAGAATCAGGAAGGTCTAGCTCAACATA AAATCTAGCTCAAAAGTTGAGGGTTGCTCTATCATTTATTTGTTTAACTATTTCTCTAGTAAATGGGAGACTTCTAACAC TACCATGTGTTTAAAATTAATTTTATTATTAGAATAATGAGAAAATAAAAATCGAACCATATACCACTTAATTATAAAGG CTTTATGACATCTACAAAAAAAAAGAGGCATTAAGACCATTTCATGATCTAATTATCCCTGAAGCTTAAGATAAAATACA CAGGAATGGTTTTATGTTATAATTTATATTATTAATTTTTTAGATCAATTTTTACCTTTATCTTATGGTGTGTTTGGTTT ACGTTTGAAAACTAATTTTTGACTTCTCAAAATCAATTCTAACAAAAAGCTACTAATTGTGATTGTGCATTGTCTATTCT GTCCACCACTCAACCAAACACACTTAATTTTTTTATCTATCTTTTACTGTTCATATCACATACCCCTACTTTATGTTTGT AAACTAGTTCTAAATTATTTTGATCTTAATAATTTGTGTAGCTAAAATTACCATTATTTAATGAATAAACTTTCCATGTT TTATGTGAATGACAATCTCTTGCATGTAAACTCAAGAATTACTCTTTGTAAAGTGACTAAACTTTTACTGAACTCTATAA CAAGCTTCTTTTCAAATTTTATGTCAATACTTCTATAGTTCTCAATATTTTCTTTTTCATTCATGAATATACTGTGCGTC TGTGCAATTCAACTACATATTAAATATAAAAATGTTAAAGATTATTCTAAATAATCATTTAATAAAAAAAATTAATCATA TCGTAATGTGCAATTACATGATGTTTAACTAATTTTTATTGAAAAATATGAATATTAATAAAATAAATTGATTAAAGAGA AAACAATTATTGATTAATTAATTGAAAGAATGTTTAATTGATTTAGTATCGATATGCAGAAAAGTTATATGAAAAATGAT TTTTTTTACATCAGAAATTTAAATTTTGCATCCTCCAGGGACTGGACCTCCCTTGCATAACTCACATGTTCTTTAGCTCT TACCCATTTGAGCTATCATTTGAGGACTATGAAAAATGATGTTGAAATGTGCAGTATATTAATATATTCATTTTTACTAC ATAAAAATAAAAATGCACATTAATAATCATACATAATTAAGTTAACTATGCCTTTCAAAGAAAAATTAAGTTAACTATAT TACATGCACTTCCGTTATAATCTTCACTAGTTCACTTCTTAATTCCTTACTTATGATTTTTTCTGCTAATTTTGCCCAGG TCGAGGAACGAAAAATTCCAGTAAAAGAACTACTTAAAGCTTATGAGGTTTTTTGCACTGGAACTGCTACTGGGATTGCT GAGGTTTATAGTGTAAGCTACAAGGATAAAAGGTACAATGTCAATATGTCATTCAAATTCTAATAATAATAATAATAATG AAAATGAAAATAAAAATGATAATGATACGTACATAATAAGTTGATATTGTTTGTGCAGGGTTAAGTTCCAAACTGGACCC GACACTGTGACTCAGAAGTTGTATGATTTAATAACGGGAATCCAAACAGGTCTAAAGGAGGATAAGAAAGGATGGGTGGT GAAGATTGATTAAGCAATTACTAGTTTATATAAACACTAGTATTGTGACTTGTACAACGCACGCACGGAGAATATTCAAT TTTTTTTTTTAAATATAAGGTGCTTGATGTGGTACCTTTATTTAAATGAGTGTACGGTACCTTAAATGATGTAAAACCTC TTTATCTCCAATTTTTTTAACTTCTAAAAGCCTCTAGCACCAT
CDS sequence (LotjaGi4g1v0044400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGACCTCCCATCTACCAGCCAGCAATGGTGAAGCTATGAACAGGGAGACTGAAGAAAGATTTGCCAATATTGATTG GGACAAACTTTCATATGAAGTTATTCCAACTGATTATATGTACATTATGGAATCCAATACAGATGGGACCTTTTCAGATG GAGCTCTCGTACCTTTTGGAACCGTTCAAATCAATCCCCATTCTTCTGTTTTAAATTATGGACAAGGACTATTTGAGGGC ATGAAAGCATACCGAAGACCAGATGGTGAGGTGCAGTTATTTCGACCAGAAGAGAATGCACTGCGCATGCAAATGGGAGC AGATCGGTTATTATTGGCAGCACCTTCCGTTGAGCAATATGTTGATGCTGTAAAACAAGTTGTCCGTACAAACAAGCGTT GGGTGCCTCCTCACGGAAAAGGAACATTGTATATCAGGCCTTTACTATTTGGAAGTGGAAGTGTTATGGGTATCTCACCG GCGCCCCAGTCAACCTTCTTAATATACGCTAATCCAATTTGCAATGTTTACAAGGGACGAACTGCAGCCTTGAGTTTGTG GGTTCATGATAAACTTCCTCGCGCATATCCTGGTGGAACTGGTGGAGTAAAAAGTATAAGTAATTATGCACCTGTCTTCC AAGTGGTAAAAGAGGCAAAAGAAAAAGGATTTTCTGATGTTCTGTTTCTCGATGCAGCAGAACATAAATACGTTGAGGAG GTATCTTCATGCAACTTTTTCATTGTTAAGCGGAATGTTATTACAACTACACCTGCAACCGGAACTATTCTTCCTGGAAT TACAAGGAAAAGTATCATTGAACTTGCTCGTGATTTGGGTTACAAGGTCGAGGAACGAAAAATTCCAGTAAAAGAACTAC TTAAAGCTTATGAGGTTTTTTGCACTGGAACTGCTACTGGGATTGCTGAGGTTTATAGTGTAAGCTACAAGGATAAAAGG GTTAAGTTCCAAACTGGACCCGACACTGTGACTCAGAAGTTGTATGATTTAATAACGGGAATCCAAACAGGTCTAAAGGA GGATAAGAAAGGATGGGTGGTGAAGATTGATTAA
Protein sequence (LotjaGi4g1v0044400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
METSHLPASNGEAMNRETEERFANIDWDKLSYEVIPTDYMYIMESNTDGTFSDGALVPFGTVQINPHSSVLNYGQGLFEG MKAYRRPDGEVQLFRPEENALRMQMGADRLLLAAPSVEQYVDAVKQVVRTNKRWVPPHGKGTLYIRPLLFGSGSVMGISP APQSTFLIYANPICNVYKGRTAALSLWVHDKLPRAYPGGTGGVKSISNYAPVFQVVKEAKEKGFSDVLFLDAAEHKYVEE VSSCNFFIVKRNVITTTPATGTILPGITRKSIIELARDLGYKVEERKIPVKELLKAYEVFCTGTATGIAEVYSVSYKDKR VKFQTGPDTVTQKLYDLITGIQTGLKEDKKGWVVKID
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 357 | 356 | 2.3E-202 | – | |
| PANTHER | 2 | 357 | 356 | 2.3E-202 | – | |
| PIRSF | 5 | 357 | 353 | 7.0E-113 | ||
| Gene3D | 5 | 186 | 182 | 2.3E-56 | ||
| SUPERFAMILY | 17 | 353 | 337 | 7.72E-101 | ||
| TIGRFAM | 53 | 356 | 304 | 4.1E-94 | ||
| CDD | 63 | 344 | 282 | 2.05629E-117 | ||
| Pfam | 76 | 312 | 237 | 1.4E-40 | ||
| Gene3D | 187 | 356 | 170 | 1.5E-56 | ||
| ProSitePatterns | 240 | 269 | 30 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Branched-chain-amino-acid transaminase activity | Catalysis of the reaction: a branched-chain amino acid + 2-oxoglutarate = L-glutamate + a 2-oxocarboxylate derived from the branched-chain amino acid. | ||
| Biological process | Branched-chain amino acid metabolic process | The chemical reactions and pathways involving amino acids containing a branched carbon skeleton, comprising isoleucine, leucine and valine. |
Expression pattern of LotjaGi4g1v0044400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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