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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0048200 |
| Transcript ID | LotjaGi4g1v0048200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein (NBS-LRR class) family; TAIR: AT5G63020.1 Disease resistance protein (CC-NBS-LRR class) family; Swiss-Prot: sp|Q8RXS5|DRL40_ARATH Probable disease resistance protein At5g63020; TrEMBL-Plants: tr|G7JRW4|G7JRW4_MEDTR LRR and NB-ARC domain disease resistance protein, putative; Found in the gene: LotjaGi4g1v0048200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:5787281..5793093) extracted from Lotus japonicus Gifu genome v1.2.
TAGACCAAATCAAAAACAAAGGTTACAACACCAAGACAAAGAGAAGAAGGCAAGATTAATGCTCAATATTATTTTGCGGA AAGGAATCATGAAATTATACAAGTCCTACCGGCATATATATAGTTTCATCTGAGGTAAGATCAACTGCACCCATAAGAAC ATTTTCATTGTTTGCAAATGTTTATATATGAAGAACAAATACATTAAAATAGAAATTCTAATTGTGATGTTTTATCTTTC CTGCAAGCCTTTCTACGATTTGAGAATTAGATCATAAGCATGGATCAATGGCTGGGAATAATCGAGAGGACTGCTACTTG CTTGTTTAGCTGCGCCAACAAGCGTGCGTCCTATGTTTATAAGTTGGAAGAGAATGTGGAGTCATTGAGAGGGAAATGGA ATCAACTTCAACAGATGTTCAATGATATCAATATCAGGATTCAGACTGCTGAATACACGGGAGAGATGCAAAGGAAAAAT GAAGTGGAGGGTTGGCTGCAGGATGTTGGCAATCTTCAAAAGGTATCTTAACTTTCTTAGAAGCTTTATAATGCATTTGC CAAAAACTTGTAGCATATCCTCTTTGAAAATTGAAAATTTGGAGATCCTTAGAAATTAAATAGGAAAATTTAGCTAGGCT ATCTGCAAACAAAAGTGTTTGTCTAAAGAATAATGTTATTGTTATCTAAATTATCCTAAGTAAATATGAGGTAAAATTAT CTTAGTTTTAGGTATTTCAGTAATATTTTGACTAAAGTAGTTTTACTACATATTTACATGGGTAATTTGATCAGACCCAA ACAAAAACTTAAGTGAGAGGGGAAGAGAGAAACAGTGGGAGAGAGAGAGAGAGGAAGAGAAATAGGAGCGTGTGACTGAG GCTAGCTATGAGATCTATGGGTTAAGTTTAAATTTAAAACTTTGATTTGTTCTAGAAAAAAAATGGTTGTCCTTGTCCAG AAAGGATTCATATAACTTGGTGCAAATGACAACCTTGGAGTGGGTTTGGGTTTAGGAAGGAAGAAAGGGAAAAAGAACTT GAGCATTAACAATGGATTGCTTCTCATGCTTTGGTTTTTTGTCATTCCTTTCATCCTCACCAATTCATTCCTTCCATTTT CAAAGTTTTGGATCGAAATCAGAATACCCATGTTAAACAAATCCCAACTTTGCGGCCAACAATTCTCACCGTGTCAAGCA CACTTGTTACCAAACTCAGATCCTTCCTTCTTTGCGACTGCACAACAACAGTAGCAACCTAAGTTATCATTATGATCATG GAGAATCGTTCCTTCAATCAACAACCTCCTTTATCATTCCAATCGAAGCAAAAAATCGAACCATCTCTTTAGCCAGCATC AAACCACCTCCTTGCACCGGTACCATCCAGAGCCGCTCACGACCACCTTTTCACTCCCTTTTGTTGATTTCTTCTTCTCT CTCGATCGGCCTCTCTCAGTCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGGACAACATCAATCTT GCAACAGTTGTTGATTGACACGACAACTTATTCCAATAGCAGGGTCGATGGAGGCTTCTAGGGTGTCTGTGACAGCACCT TGGTGTCTCGATGGGGTTTAGGTTCACTGGTTGCTGGGTTGTTTCGTTGATGTTGGATGGTGGGTGAAGGTGCTTTGGCT ATGGTGGTGTTGTTTGAGATATCGATGGGGAAAGGGAAAAGGAAGGGGAATAGAAAAAGGAAATGAGGTGGAGGCCATGT AGGATGTTAGCTAGGACAAAACATGGCCATGTAAGCACCAAATATTCATTTGAATTAAAAAACTTGTCAATGACCAATAG TCATAAAATATATTTTCTATGGACTTATTTGGAATTGACCTAGATGTCAGTTTCCCAGAACCTATTTAACCATAAAAATC ATTATAAAATGATGTAAAAACATTAAAGGAATATTTTTTTGGGCGGGATGGTGAGGCAGATGGGTGAGTTCACGAGTTGT ACTTGTCTAGCTCTCCCCATTCTGCTTCGGTGGGTTAGCAAGCACTACAAAGAATTGATGATTAACGTCATGCAAAAGCC GATGCTAATAAGCACAAAACAACATTACAGTCACGACATACAAGGTTTGAAGCTAACTCATTGAGTCAGCTACGGGGCCG GCCATAAATATTCACGTAGGCTAGGCCGACTCAAAGCCGATGCAACTAGACCGACTTTACATAGCGTCGATTGAGGCCAA CGCTAACATGATTTGTATATGATAAAAAGATGAAGTCTTCTACCGTTTGATCACTTTTTACCGAATCATAAATTAGTCGT TATCGACCAAGCAAAACACTACCACTAAAACCCTTCCTCTCTCCCTCATTCCTCTCTATCTATGTAACATATTTAACTCT ATTTTAATTGGAAAAAAAATTAATTTTTAATTAAAGAACGTTTGGCATGTTGCACTATTAGTCCCCGGCCCCATACAACC ACCCCAACCTCTCCCTCAACCACCACTCCTCCTCCTTCACCTTCATCATCTTTTTCCGCAAACCACAATCCGAGAACAAA AATAGAAACAAAATCCGTGGGACCATGGAACCAAACTCATAAACAACTTTTTAAAGATGAACGTCTTCATCTTCTCTAAA GTAAAACACTTTTCAATATCCAAAATTGATGAATAAAATCCAGAAACAAATATAAAGTTTTGAATCCTAGAAATTTCCAT ATTCTATAACAAACCTTCAGCCCCTTTTAACCACACACCGTAACAAACTTTCAGGTTGAAGGGTTTGAGGACAAGGGAAA TTGGGGTTTTGGGTTTTTTTCCTTCTAAATCCCTGGAGTATTTATGGGTTGGGTTTGTTCATGCGTTCTTTGTGGTCGTG GGTGAGGAAGGAGGAGGCAGAGTGGTAGTTGAGTAAGAGGGTGTGGGAGGGACCAAAACTGCAACAAGCAAAGCGTTCTT TAATAAAAAAATATTTTTTTTCAATTAAAATATTATTAAAAAATGTTATGTCATCATTTCTGGTAAAAATTGGATGGAAA TGAGATGGAAAACCAAAAGTGCTAAGAAAGATATAAGTTGGGATAAAAACTGCAATTTATTTTTGTTAGGGACCATCATT ACACAAATGGTAAAAGTCAGGGACTAAATGTGTCATTAAGTCAAATATATAACGTTAACTAGCAAATAAAAAATAACTAA ACCATTTAAATAAACATACGTTAATGACGACTCAAGACTCTATGTGTTCTCACAGGATATAAAGGATGTTCTGGATTCTC AAGAAATTCGTGAGAATAAATGTTTAAGAGGTTATTGCTCGAAGAATTGTGTTTTCAGCTACAAGGTTGGAAAGAAAATT GTTAAGAATATGATTCCCAATGCGGATGAGCTGTTGTATAAAGGAAAACATTTTGGTAGTATTGACATTGCTAACAAGTT ACCACCAAAGCCAGTAAATGAAATGCAAAATGTTGAGACCGTTGGTTTGGATTTGATACTCAATGAAGTTTGGAATAGTA TTGGAGATGAAAATATCAATATCATTGGTTTATATGGAATGGCAGGTGTTGGAAAAACTACCCTTCTAAGAAGAATTCAC AATGAGTTTGGAAAGAGGAAGCATGACTTCACTCTAGTGTTGTGGGTGGTGGTGTCTAAAGATTGTGATACTAATAGAAT TATGAATGATATCCGAAACAGGATTGGGATTGATGATGATGCTCGGTGGGAAAATAGTAACAAAGAACAAAGAGAGGCAA AGATTTATCAAGTCTTGAAACAAAAGAAGTTTGTGCTGATGATAGATGATCTTTGGGATGAGTTGAAACTAGAAACTGTG GGAGTTCCAAATCTAAAGGAAACTAATAATAAATCAAAAGTATTGTTCACAACACGAATTAAGAATATTTGTGCCAAAAT GCAAGCTCAGAGGAAATTCGAAGTGAGGTGTTTATTAAAGAAAGAATCATTTGATTTGTTTTGTCGAAAAGTAGGTGATG AGACTTTAAAGAGTCACACAGAAATTCCAAAGTTAGCATGGGAGATGACTAAAGAATGTGCAGGATTGCCACTGGCACTT ACTACAGTAGGAGGTGCCATGGCTGGAGTGAAAAACATAAATGCATGGAAGCAAGCCAAATATGATTTAAGGAGATCTGC TTGGACAGCGTCAGAATGGGAGAATAAAGTTTTCAATATCATTATGTTTAGCTTTGATAGATTGCCAGATGATGCCCATA AAAAATGCTTCTTGTATTGTGCTCTATACCCAGAAGATCATGAAATTAACAATGACGATCTTATTCTTCGATGGATTGGA GAGGGGTTTCTTGGTGAAGATATGAGTAAGAAAAGTACATATCATATGTATGAGCAAGGAGAATCTATCATTGAGAAGTT AAAGCTCTCATGTTTGTTAGAGGAGGGTGGTGTTGAATTTGTCTTCGCAACAGAATATTGGAGGCGGGTTAAGATGCATG ATGTGATTCGAGATATGGCATTATGGATATCCCGTGATAGAGATCAAAATAAAGACAAAGTTCTAGTTCAAGAAGAAGCA TTAGCATTGTCAGAAATCGATTCTGAAAGGTTGAATCTTGTGGAGAAGATTTCAATTATATCTAGTTCATATACAAAGTT CAAAGTACGAGCTTGTCCAAATCTTATCACTCTATGCTTAGGGCGTTGGGTGTTTATTACTGACTATTCAAATATTACGT TTATGAAAAGATTAAAAGTATTGGATCTATCACATAGTTGCATAAATTTTCTCCCCAGTATGAGACGTAGGTTGCCTGTT GAATTGAAGAGTTTGAAAAACTTGAGGGTGTTCGTTATGGAATCTTTACGCCTCTTCAGATCTGATTTCATCATTCCTTC AGAAGTGATAGAAAGTCTTGAGCAGTTAAAGGTGTTCAGATTTTCTTCAAAAATATTTTGGCCACAATTAATGTTCTTTC CCAACCTTAAGGGAGTGAAAAAACTCCTAGAGAAGTTGGAATCCTTGCCAAAATTGGAGGAATTGCACATCCCAGTTAAA ACCATCACCACCATGCATAAATTACTCGAGTCGAACAAGTTACGAGATTGCACAAGATATTTTAAGTTGGATAGAATATA TGAGGAGGCAATTGAAATGCCATCACTACTAACAACTTTCTCAGGAATGAAGAATCTCGAGAATATAACTTTCAACTATG TTTATAATATAATAGAAGGAAGTTTGTCAATTACTAACCCTTGTTATCTTTGCAAGCTTCGCCGAGTTGAGATTCATGGT TGTAGTTCAATAACTCATTTGACATGGTTGGTGTATGCTCCACTCCTTGAGTTCCTTGGTGTTTCCAACTGTCTTTCAAT TAAAGAAGTGGTCAGGGAAGTCGAAGATGAAGCTGATGTATTCCCAAATCTCAAATTGATCTCCCTTCGGACTTTAGTAG CGTTGGAGAGCATCCATAGCAAAGCATTAGATTTCCCCTCCCTGAAAATTATTGATGTATATTCTTGCTACAATCTAAGG AAGCTTCCATTGAATTCCAATTCTTCTGGCAAGGACAGTTTGGTTAAAATTCGAGGAGGCATCAAGTGGTGGAACAATTT AGTGTAGGAAGACCCTGACACAACCATTAAAGACCTGCTCCATTCTAAATTTATTCAGTCAGTATAGTATAGAGCCCGTT AATCTTTTACCAGTTCAATCGTTAATTATAATCATTGAGTATTTGGTATATATGGAATAATACAATGATGTATTTACTAA AACATACAATTTTAATTAGTGAAATACTTATATATTGTTATTTTATTTTCCAT
CDS sequence (LotjaGi4g1v0048200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATCAATGGCTGGGAATAATCGAGAGGACTGCTACTTGCTTGTTTAGCTGCGCCAACAAGCGTGCGTCCTATGTTTA TAAGTTGGAAGAGAATGTGGAGTCATTGAGAGGGAAATGGAATCAACTTCAACAGATGTTCAATGATATCAATATCAGGA TTCAGACTGCTGAATACACGGGAGAGATGCAAAGGAAAAATGAAGTGGAGGGTTGGCTGCAGGATGTTGGCAATCTTCAA AAGGATATAAAGGATGTTCTGGATTCTCAAGAAATTCGTGAGAATAAATGTTTAAGAGGTTATTGCTCGAAGAATTGTGT TTTCAGCTACAAGGTTGGAAAGAAAATTGTTAAGAATATGATTCCCAATGCGGATGAGCTGTTGTATAAAGGAAAACATT TTGGTAGTATTGACATTGCTAACAAGTTACCACCAAAGCCAGTAAATGAAATGCAAAATGTTGAGACCGTTGGTTTGGAT TTGATACTCAATGAAGTTTGGAATAGTATTGGAGATGAAAATATCAATATCATTGGTTTATATGGAATGGCAGGTGTTGG AAAAACTACCCTTCTAAGAAGAATTCACAATGAGTTTGGAAAGAGGAAGCATGACTTCACTCTAGTGTTGTGGGTGGTGG TGTCTAAAGATTGTGATACTAATAGAATTATGAATGATATCCGAAACAGGATTGGGATTGATGATGATGCTCGGTGGGAA AATAGTAACAAAGAACAAAGAGAGGCAAAGATTTATCAAGTCTTGAAACAAAAGAAGTTTGTGCTGATGATAGATGATCT TTGGGATGAGTTGAAACTAGAAACTGTGGGAGTTCCAAATCTAAAGGAAACTAATAATAAATCAAAAGTATTGTTCACAA CACGAATTAAGAATATTTGTGCCAAAATGCAAGCTCAGAGGAAATTCGAAGTGAGGTGTTTATTAAAGAAAGAATCATTT GATTTGTTTTGTCGAAAAGTAGGTGATGAGACTTTAAAGAGTCACACAGAAATTCCAAAGTTAGCATGGGAGATGACTAA AGAATGTGCAGGATTGCCACTGGCACTTACTACAGTAGGAGGTGCCATGGCTGGAGTGAAAAACATAAATGCATGGAAGC AAGCCAAATATGATTTAAGGAGATCTGCTTGGACAGCGTCAGAATGGGAGAATAAAGTTTTCAATATCATTATGTTTAGC TTTGATAGATTGCCAGATGATGCCCATAAAAAATGCTTCTTGTATTGTGCTCTATACCCAGAAGATCATGAAATTAACAA TGACGATCTTATTCTTCGATGGATTGGAGAGGGGTTTCTTGGTGAAGATATGAGTAAGAAAAGTACATATCATATGTATG AGCAAGGAGAATCTATCATTGAGAAGTTAAAGCTCTCATGTTTGTTAGAGGAGGGTGGTGTTGAATTTGTCTTCGCAACA GAATATTGGAGGCGGGTTAAGATGCATGATGTGATTCGAGATATGGCATTATGGATATCCCGTGATAGAGATCAAAATAA AGACAAAGTTCTAGTTCAAGAAGAAGCATTAGCATTGTCAGAAATCGATTCTGAAAGGTTGAATCTTGTGGAGAAGATTT CAATTATATCTAGTTCATATACAAAGTTCAAAGTACGAGCTTGTCCAAATCTTATCACTCTATGCTTAGGGCGTTGGGTG TTTATTACTGACTATTCAAATATTACGTTTATGAAAAGATTAAAAGTATTGGATCTATCACATAGTTGCATAAATTTTCT CCCCAGTATGAGACGTAGGTTGCCTGTTGAATTGAAGAGTTTGAAAAACTTGAGGGTGTTCGTTATGGAATCTTTACGCC TCTTCAGATCTGATTTCATCATTCCTTCAGAAGTGATAGAAAGTCTTGAGCAGTTAAAGGTGTTCAGATTTTCTTCAAAA ATATTTTGGCCACAATTAATGTTCTTTCCCAACCTTAAGGGAGTGAAAAAACTCCTAGAGAAGTTGGAATCCTTGCCAAA ATTGGAGGAATTGCACATCCCAGTTAAAACCATCACCACCATGCATAAATTACTCGAGTCGAACAAGTTACGAGATTGCA CAAGATATTTTAAGTTGGATAGAATATATGAGGAGGCAATTGAAATGCCATCACTACTAACAACTTTCTCAGGAATGAAG AATCTCGAGAATATAACTTTCAACTATGTTTATAATATAATAGAAGGAAGTTTGTCAATTACTAACCCTTGTTATCTTTG CAAGCTTCGCCGAGTTGAGATTCATGGTTGTAGTTCAATAACTCATTTGACATGGTTGGTGTATGCTCCACTCCTTGAGT TCCTTGGTGTTTCCAACTGTCTTTCAATTAAAGAAGTGGTCAGGGAAGTCGAAGATGAAGCTGATGTATTCCCAAATCTC AAATTGATCTCCCTTCGGACTTTAGTAGCGTTGGAGAGCATCCATAGCAAAGCATTAGATTTCCCCTCCCTGAAAATTAT TGATGTATATTCTTGCTACAATCTAAGGAAGCTTCCATTGAATTCCAATTCTTCTGGCAAGGACAGTTTGGTTAAAATTC GAGGAGGCATCAAGTGGTGGAACAATTTAGTGTAG
Protein sequence (LotjaGi4g1v0048200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDQWLGIIERTATCLFSCANKRASYVYKLEENVESLRGKWNQLQQMFNDINIRIQTAEYTGEMQRKNEVEGWLQDVGNLQ KDIKDVLDSQEIRENKCLRGYCSKNCVFSYKVGKKIVKNMIPNADELLYKGKHFGSIDIANKLPPKPVNEMQNVETVGLD LILNEVWNSIGDENINIIGLYGMAGVGKTTLLRRIHNEFGKRKHDFTLVLWVVVSKDCDTNRIMNDIRNRIGIDDDARWE NSNKEQREAKIYQVLKQKKFVLMIDDLWDELKLETVGVPNLKETNNKSKVLFTTRIKNICAKMQAQRKFEVRCLLKKESF DLFCRKVGDETLKSHTEIPKLAWEMTKECAGLPLALTTVGGAMAGVKNINAWKQAKYDLRRSAWTASEWENKVFNIIMFS FDRLPDDAHKKCFLYCALYPEDHEINNDDLILRWIGEGFLGEDMSKKSTYHMYEQGESIIEKLKLSCLLEEGGVEFVFAT EYWRRVKMHDVIRDMALWISRDRDQNKDKVLVQEEALALSEIDSERLNLVEKISIISSSYTKFKVRACPNLITLCLGRWV FITDYSNITFMKRLKVLDLSHSCINFLPSMRRRLPVELKSLKNLRVFVMESLRLFRSDFIIPSEVIESLEQLKVFRFSSK IFWPQLMFFPNLKGVKKLLEKLESLPKLEELHIPVKTITTMHKLLESNKLRDCTRYFKLDRIYEEAIEMPSLLTTFSGMK NLENITFNYVYNIIEGSLSITNPCYLCKLRRVEIHGCSSITHLTWLVYAPLLEFLGVSNCLSIKEVVREVEDEADVFPNL KLISLRTLVALESIHSKALDFPSLKIIDVYSCYNLRKLPLNSNSSGKDSLVKIRGGIKWWNNLV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 70 | 848 | 779 | 1.9E-104 | – | |
| PANTHER | 70 | 848 | 779 | 1.9E-104 | – | |
| Gene3D | 143 | 311 | 169 | 3.9E-28 | – | |
| SUPERFAMILY | 150 | 416 | 267 | 2.42E-48 | ||
| CDD | 157 | 267 | 111 | 3.05398E-6 | – | |
| Pfam | 163 | 402 | 240 | 2.9E-59 | ||
| SMART | 174 | 319 | 146 | 9.6E-6 | ||
| PRINTS | 177 | 192 | 16 | 1.6E-20 | – | |
| PRINTS | 254 | 268 | 15 | 1.6E-20 | – | |
| Gene3D | 315 | 388 | 74 | 3.6E-5 | – | |
| PRINTS | 349 | 363 | 15 | 1.6E-20 | – | |
| SUPERFAMILY | 487 | 840 | 354 | 1.62E-21 | – | |
| Gene3D | 487 | 656 | 170 | 5.7E-7 | ||
| PRINTS | 569 | 585 | 17 | 1.6E-20 | – | |
| Gene3D | 657 | 851 | 195 | 5.4E-14 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi4g1v0048200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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