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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0068800 |
| Transcript ID | LotjaGi4g1v0068800.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | C2 domain-containing protein / GRAM domain-containing protein; TAIR: AT3G59660.1 C2 domain-containing protein / GRAM domain-containing protein; Swiss-Prot: sp|Q8W4D4|BAGP1_ARATH BAG-associated GRAM protein 1; TrEMBL-Plants: tr|K7K882|K7K882_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0068800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:8691301..8698341) extracted from Lotus japonicus Gifu genome v1.2.
ATCGGCTTGAAAGGAGATTCTGCCAGTTCGGGGTATTTGATCAAGGTATTTTAGGTTTCTACCAATGTTTAGTATGCAAC ATCTTTCTTAGAGGAGGCAAATTGCGTTCAATTTTTGTGTATGTGTGTTTGGGAAATTATTGATATATGGCTTTTCTTTC TTTCTTGCTTGCTTTTTACTTTCTCTTTGTAGTTGGAACTATTGGCTGCGAAGAATCTTGTTGCTGCTAACTTAAATGGC ACGTCGGACCCTTATGTTATCATCACATGTGGGAATGAAAAGCGATTCAGGTTTAATGCTCTACCTTTCTTTTCCCCACT CTTCATTGGAATCTTCTTTTCTAAATAGTTTTGGAGCTAGAAGAGAAATTTGTTAGTGTCTGGGTCAATTTCCTGTAGAA TTTAGGAAATTGTGGATATACTAGGTTGTAGATTTCAGGTCTGTGCTTTGCATATATTGCAATGTTTGTTTGATTCAATA GTTTATACTAGGTTTAGGTTTTACTCTATTAGGATAGTTGATCTTCTGGTGTGCTGATGCAGTTCCATGGTCCCTGGTTC AAGAAATCCTATGTGGGGTGAGGAGTTCAATTTCTCCGTTGATGAACTTCCTGTCCAGGTAACCGTTGAAAATTGGTCTC AGTAATTTGAGATTCAGTTCTTATCTGAGCCGACTGCTGCGTGATATTCAACCTATTCTTGCCATTAAGTGACATATATT TTCTGGTATAATTGTGAAAGTTGTCTTCTAAGAACATGATTGGTATTTTGGTCGCCCTTTAACTGGACTTATGTTCTTTC AGAGGACATGATTGGTATTTTGGTCGCCCATTTCATACAAGTAATTTATATTTTGGCAGTTGATAAATACAATTTATTTT TAATTCGTCCTCCATTGAAATAGGTCTGAGTGTCATTTCTGTTGAGAGAGAAAATAAAAAGAGGAAAACGAGAGGCGTGT GGGAATTCCATGTGTCTTAAGTCTTAACTTCACAGCTGAGCAATGTTACAGAGATACTACTGTATTATCAACATAATATT ATCTTATTTAGATTCTTTCTAACAATTTCATTGTCATTGTAATTGATAATCTTTTACTTATTGGACTTGAGATTGTTTTA GTCTTTTGATTAGTTTGTCTGCTGCATGCCCATCTGTATTCTAGTTGTGTTTTTCTTTTTCTAGTAGTTTTCTTTTTTAA ATTCTCCAACGAAAAATATGATGAGAAGAATACTGAAAATAAATATACCTATGCATATGTTGTTTTGTTAATCATAGCAG TCAAAACATAATGTTTTGAGCATTTCCTCAGATTGATGTTTCCACGCATAAATCATAATAACACTTTACTTCTTAATTTC CTGAATAAGTCTGTTATGTACTTATGTAGGTTTTCATGAAACTGACCTCTTTCCCTGCTGACGTAGCAGATCAATGTCAC AATTTATGATTGGGATATAATTTGGAAAAGTGCTGTTCTTGGTTCTGTGACTGTTCCGGTTGAAAGTGAAGGCCAAACTG GCGCTGTATGGCATGCTTTGGATAGCTCATCAGGGCAGGTAATACCTGCATTCAGAAGAAATGTTTTGTGGTTTTGTAGT GTTTATTTGACTTTTAGATGTATGACCTGCTAGCACCTTTTTATACCTCAAGTACCATTATAGATCTGTTAATTGAATGT CAGGTTTGCCTTCATATAAAAACAAGAAAACACTCTTCGGATTCTTCCAGGTAGGATTTTTAGTTTTATAATTAATCTGT TTATTAATTTACAATTCCTTTTAGTGGTCCAAAATACTTTTGCACTGTAATTATAATTATATGCTGAATACTTATTTATT GATTTACTTGACTGATAGAATGAATGGTTATGGTGGAGCCAACACTCGAAGAAGAATGCCCTTGGAAAAACAGGGGCCCA CTGTAGTTTATCAAAAGCCAGGGCTTCTTCAAACAATATTTGATCTTCTTCCAGATGAGGTACCAACAGAAATTAAATTT ATCGGGTTTTATTAAAAATTATCAGCATGGTCTTTTTTCTGAGATATAAACATTTATATGTGTACACCTGTGTTTTCTAG TTCTTTTATACAATTGTGTTTGTGGATCTTACATATGAAGTATCTTTTCTAGGTTGTCGAGCATAGTTATTCATGTGCAC TTGAGAGGTCATTCTTGTATCATGGTCGAATGTATGTCTCTGCATGGCACATTTGTTTCCATTCCAATGTGTTCTCAAAG CAAATGAAGGTCAGACTATACTTCTATAGTTGTCTTTTACCACAATTGAGTATACATTATAGCATACATTATTACTTGTT TGACGAGGTTGATCCATCACCCATGTTGGCTGCTTCATTTTAAATTTTTTAATATTCTTAGTGTTTTTCAGAGATTGATA ACAATTGAGTTTTGGCTGGACTTTTATTTCCTGAAACTTTATTGTTAATAATATATATATATATATATATATATATATGA CTTTAGAGGAACAATCCCTTTTCTACTGATCAACACTACCAATCTTTTATTTATTGTTGATTCCTTGGATTTTGTATTTA TAATGTCTTTTCCTTTTATATATAATGTATTTTATTTGATGGTAGTAATTAAAAGTATGATTTTCTTTTTTTGGGATATA TTTGATAGGTGGTTATTCCATTTGAAGATATAGATGAGGTACTACTTCTATTTTCTTTTTTTTCTTTCTCCCTCCCCACC CAACTTCATATCTCAGATTCTCAGTTACATTAAAACTTACATCTGGTGCAATTATTCTGCTTTCTCTTAAGATTCGAAGG AGTCAACATGCATTTATTAATCCTGCTATAACAATTATTCTTCGTATGGGTGCTGGTGGACATGGTGTCCCTCCTCTAGG AAGTCCTGATGGTTAGTAATTTGTTCAAACATTATTTCATTATTCATTTTCTTGGGGGAACTCTTAAATTTCTTTTTATG ATCAAATGCTTATTCAGATACTTTCATAAAAAACCAATTAAACTAAACTTCACATATTGCATGGGCTTGGTTCTTTTTGT CTGTGTAGTTATAGATGTATCACAATTACGTTTGGTGCACGAAGGATTTCCTTTATTGTTGACTGACTCCGATGCTTTCT TTATGATTGGCCTCTAAATATTCTGCTGGCTCTCTTTTTTCTTGTCAAAATATTAAAGAAATTACAGAATGATGCTGTTT TTTTTTTTTTTAATCCTGGAAATCTTTCTTTTATGAAATGTTGACGACTGTTTTTATTTAGGGTATAAAAGTGTATACCA AGTTTAATCACAGACGATGATGACCTTTGTAAGATGATTTGACTAGATCTTCATTTTTCTTAATTTCAGGTAGAGTCAGA TATAAATTTGCATCATTTTGGAACAGAAATCATGCCTTCAGAAACCTACAGCGTGCAGCAAAGAATTTCCATGAAATGTT GGAAGCTGAGAAGAAGGTTATTTACGGTTCTTTCTTTTAATCAATTTGGCCTTGTTTATTTGTATTACAAAATTAAAATC TATTTTTTCAACCATATGCTTCTTATTATAGAATCTGCGAAATATTGAAATTAGGCATAATACCTTCACACCATGTTGTA CATTGGCAACACATTATGAAATTGATGAATCATATGCTCCAGAGAACTAATTTTGTCCAATTGTTCTGCTCCACCGTGTT GAAACTTTGGGGCTACTGGTTTAAAAATCGTTAGCTATCTTAAGAAATGGAAAGTAGTCAGTGTTTACTTCTTTTAAGAA CTTAATGATTATTACTGCATTTTTCTTTTCTCTCGGCTAATTTTAGGCTGCACTTAGTATCATGAAATCATAAATTAATA GTTTGTGACACCTTGGTACAAAGTTGATTGAGTATATAATAAAACTTAAAACACCATAAAGTTGAGTTGTCATTTGGACA AACTGCAGTTATTATTACTTTCCTTTGCCTTACATAGATTCTTGTTTTTTCTGAAATGAAAGAAAGACCATATACCATTG CTTGCCCTTTATTTTGTAATTTTTCTCCTTTTGTTTGCAACTTTTTATTTTATAATTGTAGAAGAGCATAGGTTGTAGTC ATTAACCAAAAGTGAAGATGAAGATTATAGAGGACAAAGATGTCCATATATTCTGAATAGATAAACTGTTTGTCTCTCCA GAATATGAATTTATAAAATTCTTTTGATATATACATTGGTTTTTTGATTATAAATGAATTTTACCTCAAAATTTCTGGAT AAATTGGAAACAATTTTATGTGATTCTGTAATATTTAGAACCCTTACAGATTCAGTGCTTGTTATACAGGAAAATGCTGA ATCAGAACTACGTGCACATAGCAGTTCTGTCAAACGAAGTAAGATACCAGATAGGGTTCCTCAAGCTAGCTTGCCAAAAA CTGGAAAACATCAGCCTTTTACCAAAGAAGAGGCTTTAGTTGGTATATACAATGTATGCGTCATTTTCTCATTTTGTCTT CATGAGTTTAACTACAGTATGTAACTACTAACTTGTGATCCTCCTTCAGGATGTTTTTCCCTGCACAGCTGAGCAGTTTT TTAACTTATTATTAAATGATGGTTCAAAATTTACTGGCAAGTATCGTTCAGTACGAAAAGATACTAATCTTGTGGTAAGT TTTCTTCAATTGCTATTGTTATTCTTGTTATATAGGTTCTCAATTTTCAAATGGGTTAGAAGAGCGAAACCAAATGTGAA ATAGTAAAAATCTTTTTCACATTGCTCTATGCTTGGTGACTGATATCATGCATCCTAGTTTGGCTTTTTCTTAAATCGAT AAACCCTTTAGGTCTTCTATTGTTTTAAGCGATGTTAGATGTACTGTTCATGATGATTCAAATTAAGGCACTTTATCTTC AGTTTGAAAATTTTGAATCTTTGTGATCCACATAATATACCTTTCTTGTGTTAGATGTTTTACGAGACCCCTGAATTCTG ATTCAGAATACTGAACCCCACATTTGGAGAGTAAAGCCGAGGAAATTTTGGAATAAGTAGCAGGGGAGTAAACTAGTTAA AGATGTGTCTGCCAATGGGATTTTAAGGCAGTTGGTTCATGTGGTATGAGAGTCTTAATAACCATATGGTCTAGAGGTTG ATTCTTACTGACTCCATTCTTAAAAAAAAAAGTTGAAATTGAAATATAGGGCAAGTGGGCCTATGCACTGTCTTCACCCT AAGCCCAAAGGGCTTTCATGTGAGGGGACTTGTTTGAAATATAATAAAAAAGCCATTTCTTCTCCTAACAACTTAAGTAC TTTAGGTAGGTGGTTCTTAACATCTTGCATGGATATAAATTTTGATAACCAAGTGGTATCCTGTTTTTAAGTTGTTGATT TTTTCTGTGGTATGCTTTTTTCAGATGGGACAGTGGCATACAGCAGATGAATATGATGGTCAAGTCCGAGAGATAACCTT CAGATCCCTATGTAACAGCCCCATGTGCCCTCCGGACACAGCCATGACTGAGTTTCAACATCATGTCCTATCACCAGACA AGAAAAACCTGGTTAGAGACTATGGCTTGAATTTTCTTGTCAGGATATAACAATTATGTTATCTTTTGTGGTCTAGTTAA CTTCCTTTGCTTTCGCAATGCAAATCCTACTATATCGCCCCCCCCCCCCCCCCTCAAAAAAAAAACCAAAGATAAAGAAT AAACCCAAAGCTTCTTGCCTGTGCAAGTCTAATGGGATTTTGTGACTTATTTTAGGTGTTTGAGACTGTGCAGCAGGCCC ATGATGTTCCATTTGGGTCGTATTTTGAGGTATGGCATACTTGGGATATCATATATGGTCCGCTCTGCTTTATTTGTTAA CTTTTTTCATTTAGCTTTTGTTCCTGAGATGACTTTTTTTTATCATTCATCACTTTAATAGAGGCATATGTGATATATGC TGTCAAGAACCTCATAATTTGCTACAAGTAAATGAGAAAACTCATATTTATAGTAACAGTTTTTGACAGCCTAACTGAAC TCTAACAGGCTTAACAGCCACATTAAAACTGTAATAATACAAGGCTTGAACTGACATCTAGAAATCTAAATGGCTACACC TCTGATAATTTGAACTTTGAAGTATTACAGTTAGTCTAATGAATCAAGTAGATGAGAAAGCATACAAATAATCATTGCAT TATCTTTGCCCTCTGTTTCCCAACATATTTATTCTAATATTTATATTTTTCTGACAAAAGATGACACCATGTTTTCGGTC AAACAGGTACATTGTAAATGGAGTTTGGAGACAACTAATGAAAGTTCATGTACACTGGACATTAAAGTGGGTAAGTTTTG GTTATTACCCTGAATATTGCACCACTATACTTTTCATTCCTTCTTTAAGTCTGTCATTGATGATGCAGTCCTCTGCTTAT CACCAACCACGAATAAGTGTGATTATGATGACACAATATTATTTGATTTTGTTGTAGATCTAAAGCCCTTGTGAATGCTT CCTCTTTGTGCTATCTGCATGAAATACAGTCACCCAAATAAATATTAGAGTCTTTGGCATATCTGATAGATGCTTCAATA TAGAAACAGAGATTTATTTACGTATCTATTGATTTATTTGTGTCTATGTGGGTTACCTACCTATCACTGAGAATCATTAG GGTCATTTTTAATTAAAAAGTAAAATCTGGCTTAATTCCATCCTCCACATCATTGTACTCTTGTTCACGACTAAGGATGA GCAAATGTGTGAATTGTTTCTGCAGGTGCACATTTCAAGAAGTGGTGTGTGATGCAAGGAAAAATAAAGTCAGGGGCAGT CAATGAGGTTGGTCTATCTTTGATTGATAAAAAAGTTGTTGCATTATTACTATTATTATCTTCATACTGTTGGTATCTGC AGCTTTTAATTAATGAAAAAAATTGCTGTTTATCTATGTAGTACAAGAAAGAAGTTGATGTGATGTTAGATGTTGCTCGT TCATATATCAAGTCTCATGCTTCTGGTGATGAGGACGATAAGGCCTCTTCGTCTCCTGCAGTGGCAGCTCTGGAAAATTA A
CDS sequence (LotjaGi4g1v0068800.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTCCCTGGTTCAAGAAATCCTATGTGGGGTGAGGAGTTCAATTTCTCCGTTGATGAACTTCCTGTCCAGATCAATGT CACAATTTATGATTGGGATATAATTTGGAAAAGTGCTGTTCTTGGTTCTGTGACTGTTCCGGTTGAAAGTGAAGGCCAAA CTGGCGCTGTATGGCATGCTTTGGATAGCTCATCAGGGCAGGTTTGCCTTCATATAAAAACAAGAAAACACTCTTCGGAT TCTTCCAGAATGAATGGTTATGGTGGAGCCAACACTCGAAGAAGAATGCCCTTGGAAAAACAGGGGCCCACTGTAGTTTA TCAAAAGCCAGGGCTTCTTCAAACAATATTTGATCTTCTTCCAGATGAGGTTGTCGAGCATAGTTATTCATGTGCACTTG AGAGGTCATTCTTGTATCATGGTCGAATGTATGTCTCTGCATGGCACATTTGTTTCCATTCCAATGTGTTCTCAAAGCAA ATGAAGGTGGTTATTCCATTTGAAGATATAGATGAGATTCGAAGGAGTCAACATGCATTTATTAATCCTGCTATAACAAT TATTCTTCGTATGGGTGCTGGTGGACATGGTGTCCCTCCTCTAGGAAGTCCTGATGGTAGAGTCAGATATAAATTTGCAT CATTTTGGAACAGAAATCATGCCTTCAGAAACCTACAGCGTGCAGCAAAGAATTTCCATGAAATGTTGGAAGCTGAGAAG AAGGAAAATGCTGAATCAGAACTACGTGCACATAGCAGTTCTGTCAAACGAAGTAAGATACCAGATAGGGTTCCTCAAGC TAGCTTGCCAAAAACTGGAAAACATCAGCCTTTTACCAAAGAAGAGGCTTTAGTTGGTATATACAATGATGTTTTTCCCT GCACAGCTGAGCAGTTTTTTAACTTATTATTAAATGATGGTTCAAAATTTACTGGCAAGTATCGTTCAGTACGAAAAGAT ACTAATCTTGTGATGGGACAGTGGCATACAGCAGATGAATATGATGGTCAAGTCCGAGAGATAACCTTCAGATCCCTATG TAACAGCCCCATGTGCCCTCCGGACACAGCCATGACTGAGTTTCAACATCATGTCCTATCACCAGACAAGAAAAACCTGG TGTTTGAGACTGTGCAGCAGGCCCATGATGTTCCATTTGGGTCGTATTTTGAGGTACATTGTAAATGGAGTTTGGAGACA ACTAATGAAAGTTCATGTACACTGGACATTAAAGTGGGTGCACATTTCAAGAAGTGGTGTGTGATGCAAGGAAAAATAAA GTCAGGGGCAGTCAATGAGTACAAGAAAGAAGTTGATGTGATGTTAGATGTTGCTCGTTCATATATCAAGTCTCATGCTT CTGGTGATGAGGACGATAAGGCCTCTTCGTCTCCTGCAGTGGCAGCTCTGGAAAATTAA
Protein sequence (LotjaGi4g1v0068800.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVPGSRNPMWGEEFNFSVDELPVQINVTIYDWDIIWKSAVLGSVTVPVESEGQTGAVWHALDSSSGQVCLHIKTRKHSSD SSRMNGYGGANTRRRMPLEKQGPTVVYQKPGLLQTIFDLLPDEVVEHSYSCALERSFLYHGRMYVSAWHICFHSNVFSKQ MKVVIPFEDIDEIRRSQHAFINPAITIILRMGAGGHGVPPLGSPDGRVRYKFASFWNRNHAFRNLQRAAKNFHEMLEAEK KENAESELRAHSSSVKRSKIPDRVPQASLPKTGKHQPFTKEEALVGIYNDVFPCTAEQFFNLLLNDGSKFTGKYRSVRKD TNLVMGQWHTADEYDGQVREITFRSLCNSPMCPPDTAMTEFQHHVLSPDKKNLVFETVQQAHDVPFGSYFEVHCKWSLET TNESSCTLDIKVGAHFKKWCVMQGKIKSGAVNEYKKEVDVMLDVARSYIKSHASGDEDDKASSSPAVAALEN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 86 | 86 | 9.6E-11 | ||
| ProSiteProfiles | 1 | 45 | 45 | 9.465 | ||
| PANTHER | 1 | 467 | 467 | 8.2E-285 | – | |
| PANTHER | 1 | 467 | 467 | 8.2E-285 | – | |
| CDD | 2 | 61 | 60 | 3.18711E-10 | – | |
| SUPERFAMILY | 3 | 74 | 72 | 1.34E-12 | – | |
| Pfam | 3 | 59 | 57 | 8.3E-8 | ||
| Gene3D | 110 | 231 | 122 | 9.0E-20 | ||
| SMART | 111 | 177 | 67 | 1.0E-24 | ||
| Pfam | 114 | 183 | 70 | 7.2E-15 | ||
| CDD | 122 | 230 | 109 | 1.02135E-63 | – | |
| Coils | 222 | 242 | 21 | - | – | |
| ProSiteProfiles | 283 | 453 | 171 | 35.818 | ||
| Pfam | 287 | 432 | 146 | 3.5E-32 | ||
| MobiDBLite | 453 | 472 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0068800.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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