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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0144800 |
| Transcript ID | LotjaGi4g1v0144800.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Tetratricopeptide repeat protein 7A; TAIR: AT2G43040.1 tetratricopeptide repeat (TPR)-containing protein; Swiss-Prot: sp|Q8GZN1|NPG1_ARATH Protein NPG1; TrEMBL-Plants: tr|A0A1J7GH42|A0A1J7GH42_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0144800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:23241571..23247812) extracted from Lotus japonicus Gifu genome v1.2.
CTCTAACATGGCAGTGACAGATTCTTTCTACATTCAAAATTTGTAACGTAACGGTGGACCTGACCACCTCACCTGTACCT ATTCCTCGTTCACCTTCTTCTCTCGCTGTCTTCGCAATGCACTTGAATATTTTAAATCTCTGACACATCTGCGAGATCGT CAATCTCTATTGAAACCACGTTCTATTCATTCTGGCCACATCAAACAAGACAACAAAATCGAATCGAAGACCAAACACCC ACATTGTTTTCGTCAAGGCCTAACTAAGGTTTCTGTTTCCTTTCTGAATCTGCTTCAATTTTTCTTTTCTATTCTATTCC CATTCAGCTAGCGATCTCGAAACGGCGTCGTTTACGAGAACTGGTGAATGCAGGTGAGAGTGGGGGAGATGATTGATGGA GTCGAGTGGGAACGAGCGCGTGAGGACGATACGGGAGGTGTGCGCGAATGGGAGCTCCATGGCGACAGCTGAAGTTGAAG CTAAACTCGATGAAGGGAACATTCAAGAAGCTGAATCAGCATTGCGAGATGGCTTGTCTCTCAATTTTGAGGTCAGTTTT TGTGTATTGTATGTTTCATAATTGTGATCGAATCTATATCATGATGTTATGGCCCCATGAATTTAAAACCTTGATCGTAA CAAATTTTGTCTGAATTACATTATTGGCATGTTTGGATATGCTTTTATGATTGATTCTATTACTAAAATCAATTTTGGGG GAAACTTCGGTGAGTGAGTTTTGTGTGTTAGAATTGATTAGGAGGAAAATCAAGCGAATCAAAACATGCTATATGTTGTG TTAAAATTCCCATTGTTAATAGGTAGAGCTTTGGAGGTACGTGATAGACTGGTTTTATACCTTCATTGTAGAATATGACT GGATTTAATTACAATTTTCAGTCCAATATTAAGGTCTTTGACTCTTTGGGGAGGGGGGGTTTTCATTTTCCTTAACTTTT GTTTGAGGCATAGAATAGTCTTGGTCCCAACTCTCAATCTATGTTGTTAATCCCGGCTAGATCCGGCACGATCCCGGTGC GAAAAGGAAGTTTCTGACATTTCCAAAAATGTACTCCAATTTTAAACGCTGGGCCTGGGGGTGTTTTTTAGGGGTATTTC CGGGCTTTCGTGACGAATAAAACCCTAGATGAGAGGAAGAGTTCGACCCTCTCCTCACTTGCCCTGCTCTCTGCGCCGTT GCTCTCTCAAGCGTGACAAATGGCTGCTACTATGGAGGAGGTATGAATATGTTATGGATTTCAAGTAATATTTATCATAG ATTTAGTGTATATGGCATAATTATGCAAAATATAGACAAAAATTCACTATTCCGGCTATCGCGCTATCCCATTTTTTGGG CCCGCCACTACGCGCTGAGATCTAGGATTGACAACATAGCTCCCAGCCTTTTATTGCAATATGTTAATACTTGCCAATCA TCATTTGTGGAAAAGTTCTCCCTTGGGGCCAGGCTTCCACTCTCAGATTTATGATTACCCTTTTTACAAAAGAAAAGTTT GTGTATTGCTAGGAATTTGTTGTTTTATGGTACAACGTTTGCATAGTGTGTGAAGAATAAGATATGAGCACAACAGTAAT GAAGTTCCACGAAGCAAAATTTGCAGTATCTTATCTATTTAATTTGAACTTTTTTTTTTCATTTTTAACAAATGTGCAAC AGCCGGGGGGGGGGGGGGGAGTTCATTTCTTGTAAACATGAGTCAAATCTCTATTTTACCAGTATTGAGAATATACTTTG ATATGAAGTTATGAACAGGAACTTCATCACATGTAATTGGATTTGAAACCAGAGAAACTGGTACAATCTGTAAATTTAAA TACAAATAACTCATTGAGTGTAATATGAAGATCTGTCATACCTTTGTTTTATCTTGGAATTGAATTGCATAATACCATTT TTGGTGAAAAATCAAATTGTATGTTTGAGTTATGTTCCATGGTCATTGTTAAACTGTAACAGGAAGCAAGAGCTCTTCTC GGAAAATTAGAGTATCAGAGAGGTAATGTCGAAGGTGCTCTTCGTGTGTTTGATGGGATTGATCTTCAAGCAGCAATACA GCGACTGCAACCTTCCCTTTCTGAAAAGCCAACCATCAAGAGAGGTCCCACCCGTACTGAGTCACCTTCCTCGGTCTCAC AGCATGGTGCTAGTTTGGTGCTTGAAGCCATCTACTTGAAAGCCAAGTCTCTACAGAAGCTTGGGAAGTTTACTGGTATT GAATATTGTATTAGCTTCTGAAAGTTATTCTCAACATGTTATTAACTTTTTGTCTTTATTGTCTTTTAGAATGGGAATGA ATCTTCAATTCCCGCTGCACATATATCATTATATCTTTGAATCAGTTTGAATACATTGAAATGCTTATTTCATGGATTTA TGCAGAAGCTGCTAACGAGTGCAAGCATGTTGTTGATGCTGTTGAGAAGATATTTTATCAGGGTATATCTGATACTCAAG TGGACAGTAAATTGCAGGAGATAGTCAGCCGTGCGGTAGAGCTCCTTCCCGAGCTTTGGAAACAGGCTGGTTGCCATCCT GAGGCAATTGCTGCTTACCGGCATGCCCTTCTTAGTCAATGGAACCTTGACAATGAATGTTTCGCGAGAATTCAGAAAGA ATTTGCTGTATTTTTGCTGTACAGTGGGGTGGAGGCAAGTCCACCTAGTTTAGCAGTTCAGACTGACGGGTCTTACGTAC CTAAAAATAACCTGGAAGAGGCAATGCTTCTTCTTATGATTCTCTTAAGAAAGTTTAGCCTAGGTAAGATAACTTGGGAT CCTTCAATTATGGACCACCTAACATTTGCACTTTCAGTATGTGACCAAACTACTACATTAGCTAAGCAACTTGAAGAGTT GATGCCTGGTGTATATCACCGTATCGACCGTTGGAATTCTTTAGCTCTTTGTCATAGTGGAGCTGGACAAAACAAAAGTG CATTGGATTTGCTAAGGAAATCATTGCACAAGCATGAACGACCAGATGACCTGACATCGTTATTATCAGCTGCCAGGATT TGCAGTGAGGATCCCCATCTTGCTGCCGAGGGAGCAGGATATGCGCAGAGGGCAATCGATAATGCCGAAGGCTTAGATGA GCATTTGAAAGGTGTCACTCTTCGGATGCAGGGACTTTGCCTTGGCAAGCAAGCTAAGGTTGCTTCATCTGACTTTGAGA GGTCTATGCTTCAGTCAAAATCTCTGCAATCATTGGAGGATGCAGTTAGACTAGAGCCAAACAACTCTGATCTAATTTTT GAATTGGCTATTCAATATGCCGAGCACCGAAATCTGACTGCTGCTTTACGCTATGCCAAGCAGTACTTTGACAAAACTGG TGGCTCCAAGTTGGAGGGATGGAGATTACTTGCACTGGTTTTGTCTGCCCAAAAAAGATTTTTGGAGGCTGAAGTGGTGA CTGATGCTGCTTTAGATGAGACTTCAAAATGGGAGCAAGGGCCACTGTTCAGGCTGAAAGCCAAGCTGAAGACCTCCCAG TTACGACCAATGGATGCTATTGATCTTTATCGTCACCTTCTTGCATTGGTCCAGGCCCAGAAGAAATCATTTGGGCATCT TAGACCTAGTTCACAGGTAAAATTCTGCCATTTTCTCTTCTTGCAGTAATTCTTATGTTTAAATTTAATAATAATGAGAT ATGTGTTATCAACTTATTCTTGTGTTTTGTCATTGTTATTGAAATGGAAAGGCTTGCATCCTCTTTCTGGTGGTTTTACA GAAAGAAACTTTTTACTTAATGGGGATGAAGGAAAAAAGATAACAGCGGCATTTCCTCAAGAGATGCTCATTGCATCATG GACTCCATTTATAAATTGTTGATTACAAAACTAATCTTACTCTTATTTTATTAACTTTTTGCAGGTTGAGAATGATAAAA TACATGAATTTGATGTATGGCATGGTCTGGCAAATTTATATGCAAGCCTTTCTCATTGGAAAGATGCTGAAATCTGTTTG CAAAAGGCCAGAGAGTTAAAGGAATACTCAGCAGAAACAGTACACACTGAAGGTAATCCCGGATCCTTTATGCTGTTAAA AGTTTTCTACTTTAGCATGTAGCTTGTTTATTTTTATTTTTTGGGTTGTGCGAGCTCCGGCTACCTCTGGGGAGAGGGAC TTTTACGGATCTACGTACACACTGAAGCTCTTGTCCTATAGGGAGAGGAATTGAGGCTATGGTCTTCAGGATTGGGCACA CATTGAGCACCATGGGGGAAAATGCCCCCACTCAATTATAGACGTTTCTTATTACCATAGTAATTTGTCATTTAGCCTCC ATTGCTTTGAATTAATGTCCTTCCACTTGTGTCCACTGCGAAAAATTTCTGGATTTGTCACTGGTTCTTGTAGGCCTAAG GCTTGATCTCTATACATGATAAGTTTACATATATTGTAAAGCGGAATCCTTAGGATGTGGTGGTGGAGCACAAGCTCATC ATAAGCTGGAATGGAGCAAAAGCTAAGATTTATGGAAATTCAGAACCTCCCCTGTTTTAGAATAATAGGATATGGTCCTG TTGGAGGGAGAGTTTTTTTGTGGTAGCTTTTTACATATAATTATTGGACTCGACAGCCATTCATGATAGGTCATTTATGA AAGAAATTGTATCTTTCTCTCTCCAACTGAACCATATATTGTTAGTCTAAACTGCTGATGATCTGAATCCAAATTACCTG CTAGCATGGTGTTAATATTTGAGAGCATCATAGACATTTTATATTGCTATTTGCTAATATGATTGTACCAGGTGTTATGT TTGACAGTCGTGGACAACTTGAAGAAGCTCTTGTGGCTGCTGTTAATGCTGTCCTGCTTGAACCAAACTATGTTCCAAGC AAGATCTTGGTAGGATCTTTGATGCTGAAATTGGGTTCTAAAGCTCTGCCTGTTGCTAGAAGCTTGCTTTCTGATGCACT TAGAATAGAACCCACTAACCGCATGGCTTGGTATTATTTGGGGTTAACTCACAAGGCTGATGGCCGAGTGGGCGATGCTG CTGACTGCTTCCAGGCAGCTTACATGCTTGAAGAATCGGAGCCCATTGAAGATTTCATCTGCACGCATTGACTGGATTCC ATCCCTAAATAGTTAACTCTGCGGTCAGACTGTAAAATTTTGTTGCTAGTTTTGAAAATGCATCCTAGTTGATTTTCTTC ATTTTACATTTTTTATATCTTGTCATCAGAAACCAGGCTTTGAACCAAAAATAGAAATACAAATATTGAATTAAAACAGT AATTAGGAAATAAGAAGATAAGAAAAGGATATGAGTTAATCTGGTGGTAGGAGGGATGAACTGTAAAGAACAGGATATGA GTTAGTCTTTAATGTGGTTTTCTCCTCAGCCTTGTAAAATGTGTGATGTTTTATCAGGAAATTTCATTTTGAAAGAGATT AAACTATTAAGGTTCGTTTATCTTCTCTTTATTTGCCTTGTTTGATAAGGTTTACTCCTTGAAGGATAAAATATATAGAA TCGCATGGGCTGTTATGTACATTTGTGATGAACTTGGTTGTTGCTTCTCGTGTAGTTAGCTCAGAGAAATGTTACCTCCT TAATATAGGGTGGTTCTAAAATCTAAACCCATTTCTATGATGAGTATTGACTTGGCCTGGTTCATTACTGTCCTGCACTC ACTGTTATCCTAAACTATTGCCAATGTTGTGCACCTTAGAGATAGGCACTTGAGGACCTTGACGCTTTGTCACGGATTAG ATTAGATGTTACCTTCATTACCAGTTCGCCTCTGTAAAATACTGATAATTTCTGAATAATTTGTTCTAGGAAATTAGTCT GTATTTTACCTATTCTTGTGGGTGTCTTCTGGATGGTACATTGTGAGATTGAATTGAGTGTCTACAGGCTTGTATGAAAA AACCCTGGATATGAAAGCTGTAATTGTGAATATATGTCTTCAATTATGGTTAATTTCATGTTCCCTTACTCTTGATGTGA AACTGATCAACCATTTTCATTCTTCATGTGGGGAAAAAAAAGTAGGGAAAGAGGCTTAATAATGCATAGTTTGGATGGGA AAATACGAGAGGAAAGGGTAGAAAAAATAGAAATATCAGAAAATGATGAGGAATCGAGGTAATTTTAGATAGGCTTTATT TTTTATTTATTTTTTAATGATTTTGTTTAGGCTTTAATTGCACTTTTGGTTACCTTAGTTTAAATTGTGCAATTTGACCC CT
CDS sequence (LotjaGi4g1v0144800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGTCGAGTGGGAACGAGCGCGTGAGGACGATACGGGAGGTGTGCGCGAATGGGAGCTCCATGGCGACAGCTGAAGT TGAAGCTAAACTCGATGAAGGGAACATTCAAGAAGCTGAATCAGCATTGCGAGATGGCTTGTCTCTCAATTTTGAGGAAG CAAGAGCTCTTCTCGGAAAATTAGAGTATCAGAGAGGTAATGTCGAAGGTGCTCTTCGTGTGTTTGATGGGATTGATCTT CAAGCAGCAATACAGCGACTGCAACCTTCCCTTTCTGAAAAGCCAACCATCAAGAGAGGTCCCACCCGTACTGAGTCACC TTCCTCGGTCTCACAGCATGGTGCTAGTTTGGTGCTTGAAGCCATCTACTTGAAAGCCAAGTCTCTACAGAAGCTTGGGA AGTTTACTGAAGCTGCTAACGAGTGCAAGCATGTTGTTGATGCTGTTGAGAAGATATTTTATCAGGGTATATCTGATACT CAAGTGGACAGTAAATTGCAGGAGATAGTCAGCCGTGCGGTAGAGCTCCTTCCCGAGCTTTGGAAACAGGCTGGTTGCCA TCCTGAGGCAATTGCTGCTTACCGGCATGCCCTTCTTAGTCAATGGAACCTTGACAATGAATGTTTCGCGAGAATTCAGA AAGAATTTGCTGTATTTTTGCTGTACAGTGGGGTGGAGGCAAGTCCACCTAGTTTAGCAGTTCAGACTGACGGGTCTTAC GTACCTAAAAATAACCTGGAAGAGGCAATGCTTCTTCTTATGATTCTCTTAAGAAAGTTTAGCCTAGGTAAGATAACTTG GGATCCTTCAATTATGGACCACCTAACATTTGCACTTTCAGTATGTGACCAAACTACTACATTAGCTAAGCAACTTGAAG AGTTGATGCCTGGTGTATATCACCGTATCGACCGTTGGAATTCTTTAGCTCTTTGTCATAGTGGAGCTGGACAAAACAAA AGTGCATTGGATTTGCTAAGGAAATCATTGCACAAGCATGAACGACCAGATGACCTGACATCGTTATTATCAGCTGCCAG GATTTGCAGTGAGGATCCCCATCTTGCTGCCGAGGGAGCAGGATATGCGCAGAGGGCAATCGATAATGCCGAAGGCTTAG ATGAGCATTTGAAAGGTGTCACTCTTCGGATGCAGGGACTTTGCCTTGGCAAGCAAGCTAAGGTTGCTTCATCTGACTTT GAGAGGTCTATGCTTCAGTCAAAATCTCTGCAATCATTGGAGGATGCAGTTAGACTAGAGCCAAACAACTCTGATCTAAT TTTTGAATTGGCTATTCAATATGCCGAGCACCGAAATCTGACTGCTGCTTTACGCTATGCCAAGCAGTACTTTGACAAAA CTGGTGGCTCCAAGTTGGAGGGATGGAGATTACTTGCACTGGTTTTGTCTGCCCAAAAAAGATTTTTGGAGGCTGAAGTG GTGACTGATGCTGCTTTAGATGAGACTTCAAAATGGGAGCAAGGGCCACTGTTCAGGCTGAAAGCCAAGCTGAAGACCTC CCAGTTACGACCAATGGATGCTATTGATCTTTATCGTCACCTTCTTGCATTGGTCCAGGCCCAGAAGAAATCATTTGGGC ATCTTAGACCTAGTTCACAGGTTGAGAATGATAAAATACATGAATTTGATGTATGGCATGGTCTGGCAAATTTATATGCA AGCCTTTCTCATTGGAAAGATGCTGAAATCTGTTTGCAAAAGGCCAGAGAGTTAAAGGAATACTCAGCAGAAACAGTACA CACTGAAGGTGTTATGTTTGACAGTCGTGGACAACTTGAAGAAGCTCTTGTGGCTGCTGTTAATGCTGTCCTGCTTGAAC CAAACTATGTTCCAAGCAAGATCTTGGTAGGATCTTTGATGCTGAAATTGGGTTCTAAAGCTCTGCCTGTTGCTAGAAGC TTGCTTTCTGATGCACTTAGAATAGAACCCACTAACCGCATGGCTTGGTATTATTTGGGGTTAACTCACAAGGCTGATGG CCGAGTGGGCGATGCTGCTGACTGCTTCCAGGCAGCTTACATGCTTGAAGAATCGGAGCCCATTGAAGATTTCATCTGCA CGCATTGA
Protein sequence (LotjaGi4g1v0144800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESSGNERVRTIREVCANGSSMATAEVEAKLDEGNIQEAESALRDGLSLNFEEARALLGKLEYQRGNVEGALRVFDGIDL QAAIQRLQPSLSEKPTIKRGPTRTESPSSVSQHGASLVLEAIYLKAKSLQKLGKFTEAANECKHVVDAVEKIFYQGISDT QVDSKLQEIVSRAVELLPELWKQAGCHPEAIAAYRHALLSQWNLDNECFARIQKEFAVFLLYSGVEASPPSLAVQTDGSY VPKNNLEEAMLLLMILLRKFSLGKITWDPSIMDHLTFALSVCDQTTTLAKQLEELMPGVYHRIDRWNSLALCHSGAGQNK SALDLLRKSLHKHERPDDLTSLLSAARICSEDPHLAAEGAGYAQRAIDNAEGLDEHLKGVTLRMQGLCLGKQAKVASSDF ERSMLQSKSLQSLEDAVRLEPNNSDLIFELAIQYAEHRNLTAALRYAKQYFDKTGGSKLEGWRLLALVLSAQKRFLEAEV VTDAALDETSKWEQGPLFRLKAKLKTSQLRPMDAIDLYRHLLALVQAQKKSFGHLRPSSQVENDKIHEFDVWHGLANLYA SLSHWKDAEICLQKARELKEYSAETVHTEGVMFDSRGQLEEALVAAVNAVLLEPNYVPSKILVGSLMLKLGSKALPVARS LLSDALRIEPTNRMAWYYLGLTHKADGRVGDAADCFQAAYMLEESEPIEDFICTH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 691 | 691 | 0.0 | ||
| PANTHER | 1 | 691 | 691 | 0.0 | – | |
| SUPERFAMILY | 54 | 452 | 399 | 8.23E-9 | ||
| MobiDBLite | 91 | 110 | 20 | - | – | |
| SMART | 119 | 152 | 34 | 63.0 | ||
| Gene3D | 278 | 454 | 177 | 8.0E-9 | ||
| SMART | 303 | 336 | 34 | 16.0 | ||
| ProSiteProfiles | 407 | 492 | 86 | 6.768 | ||
| SUPERFAMILY | 416 | 524 | 109 | 2.85E-5 | ||
| Pfam | 429 | 488 | 60 | 0.0023 | – | |
| Gene3D | 456 | 631 | 176 | 7.6E-12 | ||
| SMART | 459 | 492 | 34 | 250.0 | ||
| SUPERFAMILY | 546 | 681 | 136 | 8.1E-17 | ||
| SMART | 549 | 582 | 34 | 0.28 | ||
| ProSiteProfiles | 549 | 686 | 138 | 20.141 | ||
| SMART | 583 | 616 | 34 | 47.0 | ||
| Gene3D | 632 | 689 | 58 | 1.1E-5 | ||
| Pfam | 635 | 680 | 46 | 0.0062 | – | |
| SMART | 653 | 686 | 34 | 12.0 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi4g1v0144800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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