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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR043376
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 14 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.709s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0361500.1
n.a. Tetratricopeptide repeat protein 7A; TAIR: AT1G27460.1 no pollen germination related 1; Swiss-Prot: sp|Q9CB03|NPGR1_ARATH Protein NPGR1; TrEMBL-Plants: tr|I1JTR1|I1JTR1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0361500 LjG1.1_chr1 83625991 83632676 +
2 domain predictions
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LotjaGi1g1v0361500.2
n.a. Tetratricopeptide repeat protein 7A; TAIR: AT1G27460.1 no pollen germination related 1; Swiss-Prot: sp|Q9CB03|NPGR1_ARATH Protein NPGR1; TrEMBL-Plants: tr|I1JTR1|I1JTR1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0361500 LjG1.1_chr1 83626546 83629709 +
2 domain predictions
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LotjaGi1g1v0706500.1
n.a. Tetratricopeptide repeat protein 7A; TAIR: AT4G28600.1 no pollen germination related 2; Swiss-Prot: sp|Q66GN3|NPGR2_ARATH Protein NPGR2; TrEMBL-Plants: tr|A0A072U4B1|A0A072U4B1_MEDTR TPR 7B-like protein; Found in the gene: LotjaGi1g1v0706500 LjG1.1_chr1 127481431 127487503 -
2 domain predictions
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LotjaGi2g1v0343600.1
n.a. Tetratricopeptide repeat protein 7A; TAIR: AT2G43040.1 tetratricopeptide repeat (TPR)-containing protein; Swiss-Prot: sp|Q8GZN1|NPG1_ARATH Protein NPG1; TrEMBL-Plants: tr|A0A0R0LB33|A0A0R0LB33_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0343600 LjG1.1_chr2 82086118 82094088 +
2 domain predictions
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LotjaGi2g1v0343600.2
n.a. Tetratricopeptide repeat protein; TAIR: AT2G43040.1 tetratricopeptide repeat (TPR)-containing protein; Swiss-Prot: sp|Q8GZN1|NPG1_ARATH Protein NPG1; TrEMBL-Plants: tr|I1L565|I1L565_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0343600 LjG1.1_chr2 82086151 82093656 +
2 domain predictions
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LotjaGi2g1v0343600.3
n.a. Tetratricopeptide repeat protein; TAIR: AT2G43040.1 tetratricopeptide repeat (TPR)-containing protein; Swiss-Prot: sp|Q8GZN1|NPG1_ARATH Protein NPG1; TrEMBL-Plants: tr|I1L565|I1L565_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0343600 LjG1.1_chr2 82087051 82093009 +
2 domain predictions
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LotjaGi4g1v0144800.1
n.a. Tetratricopeptide repeat protein 7A; TAIR: AT2G43040.1 tetratricopeptide repeat (TPR)-containing protein; Swiss-Prot: sp|Q8GZN1|NPG1_ARATH Protein NPG1; TrEMBL-Plants: tr|A0A1J7GH42|A0A1J7GH42_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0144800 LjG1.1_chr4 23241571 23247812 +
2 domain predictions
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LotjaGi4g1v0144800.2
n.a. Tetratricopeptide repeat protein 7A; TAIR: AT2G43040.1 tetratricopeptide repeat (TPR)-containing protein; Swiss-Prot: sp|Q8GZN1|NPG1_ARATH Protein NPG1; TrEMBL-Plants: tr|A0A1J7GH42|A0A1J7GH42_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0144800 LjG1.1_chr4 23241966 23246681 +
2 domain predictions
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LotjaGi4g1v0144800.3
n.a. Tetratricopeptide repeat protein 7A; TAIR: AT2G43040.1 tetratricopeptide repeat (TPR)-containing protein; Swiss-Prot: sp|Q8GZN1|NPG1_ARATH Protein NPG1; TrEMBL-Plants: tr|A0A1J7GH42|A0A1J7GH42_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0144800 LjG1.1_chr4 23241981 23245726 +
2 domain predictions
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LotjaGi5g1v0033400.1
n.a. Tetratricopeptide repeat protein 7A; TAIR: AT1G27460.1 no pollen germination related 1; Swiss-Prot: sp|Q9CB03|NPGR1_ARATH Protein NPGR1; TrEMBL-Plants: tr|A0A151S1F0|A0A151S1F0_CAJCA Tetratricopeptide repeat protein 7B; Found in the gene: LotjaGi5g1v0033400 LjG1.1_chr5 5479902 5485169 +
2 domain predictions
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LotjaGi5g1v0033400.2
n.a. Tetratricopeptide repeat protein 7A; TAIR: AT1G27460.1 no pollen germination related 1; Swiss-Prot: sp|Q9CB03|NPGR1_ARATH Protein NPGR1; TrEMBL-Plants: tr|A0A151S1F0|A0A151S1F0_CAJCA Tetratricopeptide repeat protein 7B; Found in the gene: LotjaGi5g1v0033400 LjG1.1_chr5 5480047 5485072 +
2 domain predictions
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LotjaGi5g1v0033400.3
n.a. Tetratricopeptide repeat protein 7A; TAIR: AT1G27460.1 no pollen germination related 1; Swiss-Prot: sp|Q9CB03|NPGR1_ARATH Protein NPGR1; TrEMBL-Plants: tr|A0A151S1F0|A0A151S1F0_CAJCA Tetratricopeptide repeat protein 7B; Found in the gene: LotjaGi5g1v0033400 LjG1.1_chr5 5481170 5484706 +
2 domain predictions
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LotjaGi5g1v0154400.1
n.a. Tetratricopeptide repeat protein 7A; TAIR: AT4G28600.1 no pollen germination related 2; Swiss-Prot: sp|Q66GN3|NPGR2_ARATH Protein NPGR2; TrEMBL-Plants: tr|I1L8G5|I1L8G5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0154400 LjG1.1_chr5 40107055 40111868 -
2 domain predictions
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LotjaGi5g1v0187600.1
n.a. Tetratricopeptide repeat protein; TAIR: AT4G28600.1 no pollen germination related 2; Swiss-Prot: sp|Q66GN3|NPGR2_ARATH Protein NPGR2; TrEMBL-Plants: tr|K7LK68|K7LK68_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0187600 LjG1.1_chr5 47561591 47566240 -
2 domain predictions
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