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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0147400 |
| Transcript ID | LotjaGi4g1v0147400.5 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | RNA-binding protein, putative; TAIR: AT3G54230.2 suppressor of abi3-5; Swiss-Prot: sp|F4JCU0|SUA_ARATH SUPPRESSOR OF ABI3-5; TrEMBL-Plants: tr|A0A072TS81|A0A072TS81_MEDTR RNA-binding protein, putative; Found in the gene: LotjaGi4g1v0147400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:23935321..23942733) extracted from Lotus japonicus Gifu genome v1.2.
GTTGCTGATCATCATCACTACGGTAATATAGGACCTGTTGATAAAAAAATTTGATCATAGGATTATTAATTTTGATCAAT TAGAAATGCTTTGTTGTTTGGTGGTAGTGAGTATGAATCCCGTCTCATGTAAGATTGTACAATTAAGATCTTCCTTTGTT TTTATTTTTATTTTTATTTTACATGATGTTTTGCTTTAAAACTATGAGGGTAATACATTCATTCATTTTGATATTTAGTG TAAAATTCTATCTTTTCTTTCCTCCCATTTTACCTCTTTTTTTTTGCAGGGTTGGTGATTCTTATGATGAAAGACGATTT ATAGATGAAAGATATCAAAGAGATGCTATATATCAGAGAAATACTTTCCCCCGTGATGGTTTGGACAGAGAGGCCTATCT GCCACCAGGACCTGCTGTTGGCCACTGGAGTCAATCCAAACGGAGAGGTTATGACGAAGATTATCCACTTGAAAGGCAAT CTAGACGACTTCAGAGGCCTTATCATGAATCTTATAATCAGATCGACAGGGATCGTGAAATCGGCATGTACCAAGAATAT GATAAATTTCAGGATGACTATACCAGCATTGAAAATTATGCTGATCGAGGATATGATAAACCTGCCAGGTTTGCAGGAGA TGACCGTGATGATTATGCATATGATGATTATGGCTACAAGTCGCGTGTTTCTCACCACCGCAGGGAGGATAGCCATGAGA GGGATTATGATCATGGTCGGCATAGTTATGATTCTGATTATGATAGAGGCAATAGAAGAGATAGTAATTGGAGGCAACGT GAATCACGAGAACGAGATACGAAAGGCCTTAGTCGGGAAAGAGATCTGAGTCCACATAGGAAACATGAGCGTTCCCATTC CCATTCCCGGTCTCGTTCCCGTTCTCGATCACGGCGTTCCCGTTCTCGATCACATTCCCATTCCCATTCCCGTTCTCGTT CCCAATCTCGTGGATATGATGATCATCCAAGATCTAGGTCCCCTAGAGGTCGAAGTCATAGTCGTAGTTATCGGGAAGAC AGCTATGTTGACAGTCAATATGATAGAAGTGAAAGACGTAGGGATCGTGAGGATAAACGTCAGCGTGAGCATTATTCTGT GGTATGTGATGTATTAAATGGTGCTTTTATTTTATCTGTGATTATCTTTACTATTGCTGGAGAATTTGATTTAAACGGTA TTTTTGCAGGCCCCATCTGCAACTGTTGTTGTGAAAGGTCTTTCACAGAAGACAACTGAAGAAGATTTATACCAAATCCT TGTATGGGCTCTTGACATGCTTTGCTTAACATTATCATTTGGTCTAGATTTTGATAATGCCTTTTTTTTACTGACATCAT TTACATGATTTTTAGGCGGAATGGGGACCCCTTCGTCATGTTCGTGTTATAAAGGAGAGAAATTCTGGCCTCTCTCGTGG ATTTGCATTTATTGATTTTCCTTCTGTGGTACTATGACTTCTAATTTTCAATTTCAATTCTGTACATTTCGGTTTCAAGA ATGTTATATTGGGGAATTAATTGGGGAATAATATTATGGATTAGGGAGCTGCACAAGGTATGATGGACAAACTAGGAGAT GAAGGTCTTGTCGTGGATGGAAGAAAGCTTTTCTTTGAATATAGGTAATTTTTCATTTTTAGGGCTTTGTTATCTGTCTG CATTAAATTAGTTATAATCCAATGCTCTTAAGGCTTGTTCCTACGAGCACATCTTAGATTACAATGCCAAGCTATTTTTT GTTGCAGTAGTAAGCCAACTGGAGGTGCAGGTCCAGATGGAGCTATGAAACCTGGTCATAGTCATAAGAGCATTACAGTA CCATCTGATTGGATGTGCACTATATGTAGCTACATCAATTTTGCACGCCGGACTTCCTGTTATCAGGTTCTTCTTTTACT CCATCATTTTTGTGTTTAAATTGCTATTGTAGCCTATTTTTATTTTGATTTCCATGTCTCAAACTCTGAATCATTTTATG GTGGTCTGCCATTTCTCAGTTGAGCTGTAAGTGTATGTATTTCCAGATATTGACTCAATTCGATGTTGTTTTCCTCATTA TTGCAGTGTAATGAGCCACGGACAGATGATGCTCCTGCAGCAGATATTTCATCATCTAATTCGGCAGCCTTGGGAAAGAA AGGCTTGGAGGCAGGTCAGTATAGCTCCTTTATCTGACATTTACATTTTATTAATGATCTGCAACTCACAGCTTTACCTG TAATTAGGTCCAACCCATGTTTTGGTTGTCCGTGGATTGGATGAAAATGCTGATGAGGAAATGCTCCGCTATGAGTTTTC CAAACATTCTCCAATCAAGGTTTGGCTACTAACTAATTACGCAAACCGTGATCATTCTTTTAGGTTTGGAAAGGATGGAT TGTTCTTGTTTATGTTGCCAGTTATGTGCTAAGAAGTCGTGTTATCAATTACAGGATCTACGTCTTGTGAGAGACAAGTT TACTCATGTCTCAAGGGGTTTTGCTTTTGTACACTTTTACTCGGTAGGTAAATCTTATTATGATTAATGGTTGAGCAATT CTCGTTGCATAAGTTGGTACTCCTTCATTTTTTCTTTCTGCTGTTTAAAGGGTAATATTGATGTCATGCATTGAGCAATT AAAACTTATATGCATGAAATGTACGCATTTGGCCTGTTTTATGCCATTGTTTAGTTGTAGGTCATGTTTTACATCATTCG GTGATATCTACTTTCTAAATATTTCTAAGTTTAGTTGGAAAAGAAGTATGAAGAGTAATGAGTAATGACATCTTGCTTTT TTGGTGGACATCGTTCTTTCTTTGATGGAAAATTGGAAATTATAGAATTTGCATATAGGAAGGATTTCTTGGACTTTTGT TGTTCTAGTAATACTTTGAAAGTTATTGATATGTAAAATTATCATAATTTATATTTTCTTGTTGCTATTTGTTTGTTTTT TTCTGTTGGAGTTCCTTGCAAATGATGCTGTTCATTTTGACATATTTTGTTTTTTCCTTTCTTGTAAAAGAGAGGGGTGG GGGGGGGGGGAGCTTGGCTTGGAAAATTTACTTTTTGAAAGGTATTTTGTTAGGTTTTATGTTTTAATGTGGTAGTAATA TATTTATGCTTAGGTGGAGGATGCTACAAAAGCTCTTGAGGCAACAAATGGAACAACTCTTGAGAAGAATGGGCAGATTC TAAGAGTAGCATATGCAAAAAGTATACTCGGACCTGGATCAGGAGCATCAGGAACTTCCCAATCAAGCAGTCTTGCAGCT GCTGCTATTGAGGCTGCAACATTTGCCCAACAGGTGTTTTATTTATTTGTGTATATTATGAATTTGTCTCATAGTTTATG TGTGGTTGAAGAAGACATTATTTATTGTTGCAGTTAACTACTGTCAATTCCAATTCATTTTATGCTAGTTTAGCCATGTT GTCAGTTGTCTTCCCTGTAGATGATTACGTTAGTGCGCCTATTTCCTCAATTAACAGTTGAATTAAAATAAATTAATCAT TGACTGCCAAAAAAAATAAATTAATCAGTAGAGGGAACCTGGTGCAAAGTAGCTGGGATTCTTCCTCAGATATTTTATCA GAGGGAGGCATTTTAAAGGTGGTGAAGAAACATTTGTTTCATAACAAGTGTGCTGGGGAAGACTTTGAATTGGTTTGAGA AATGTTTGAGCATTTTTTTTGGAAACGGGAACAGTTGTTCTGATTGCCTTCAGCAGGAAAAAAATGAGGCATTGTCTAAA TAACTGTAAAAAAAAGAGATATCTAAAACAGATAATATGAAATCTTCATAATTCCATCCTGCTCAAATATTTTTTGGTTT ATGAAAGTGATAAGAATGTTGGAAGAACTATAACGCAAAAGCTAGCCCTTATAGTTGGAGGGCCCGAGGCCTTATGAACC CCACACTAGAATCCCTTACTTACAATGTGGGACTCTCAAGTCCCCTACCTTGCAATTGGATCCTAACATCCCACCAAGTC CAGCGGCCCTGATGCCGTGCCCACGCAGACTGTCTGTGCACTAGCCCTTTGACTAGTCCCAGGCAAACACTACAATGCTG GCGTCACCACTAGCGCCACACGTTTGGAGCTGAAAGACATGGTGGAAGGCTCTGATACCAATTATAAGAACCTTGGGCGA ACCACACCACAAAAGCTTTTGTAGTTGGAGAGTAAAGGCCTTATAAACCACCCTACACTAGAATCCCATGCTTCCAATGC GGGATTCAAGTCCCATCCCTTGGAATTGGATCCTAACAGAAAGCATATTTATGTAATAATTCTGAGCTGACTTCTTAATT CAACATACAGTTCGTAGGTGATCTACTTTGTTTTTTGAGTTTTTCCGTGGGCGTATTTTCTCACTGATTCTAACTGATTT TAAAGGGAAATTCCTTCTAGATTTATTTCTGATTTCATTGAATATGCCAAAATTAATCTTATACATATCTTTACTGTCTT TTTTAATTATAATTCTGATATACTGTCATGTCATTCCTAATTGTGATCGATATCTTGTGGTCTTCTCCAACCTTCAGTAT GATTCTGTGGGATGGGCTCCAAAAGAATACAATGCAGATGACAAACAATGTACTGCTCCAGCGCAAACTGGCACTGAAGT TGGTGCTCCACAATCTGGCTTTGTGTGGGATGAAGCATCGGGATATTACTATGATGCTGCTTCTGGTTTTTATTATGATG GGAATACTGGTATGTTTCTTGTTTAGTTGATAGAAAAAGCCTTTGGAGGAACAGCTTAAAAGTTAAAACTTAGATTCTGT AAAAGTAATTCTCGAGTTACTTTAAGATTTTAATTCCTTTAATCGCTCCATTCTTAATTAGCCAAAAGCAGGTTTGTGTA GTACCCGAACATGCACAAGTTGAATTCTTCATTTACATTTACTGGTGTATAATTGAACTCAGGCTGTTTCTTTTCCTACA TCCCCCCCCCCCCTTTTCTCACGTAATTAGGCATGCAGGGATGACGAAGGAAGCAGGGTTTTGCTGATCTCCCTGCATGC CTAGTATTTGTGTTTGTTGTATATGCACGCGCACACATACACACTACATTTTGGTACTTTACTCTGGGAAATTTTACTTA TGGTTGTTGCATGTAATGATTGAGCGTGTTTGTTGACCAGCATTAACACTTGGAATCATTGATATACTTCCCAACATGTT TTGTTCTTATTTTCGTTTTATTTATTTTCTACATTGTTGTGACATGCAGGTCTTTACTATGATGGTAATAATGGGATATG GTATTCATATGATCACCAGACTCAGCAGTACATCCCTTGCACTGATCAAAATCAGAATAAAACAGCTAATAGTGAGTCCG AACCTTCTAAGGCATCAGATGGCCCCAGCAGTAAAAAGGTGGTGATTTCTGCACCAGCTACAACTGTTACATCAATTGAG AAGCCAGCTTCGTTGGCAGATGCTGTCCAGGCTGCTGCAACTGCTGCTTTAGCTGCAGAGAAGAAAGAGAAAGAAAAATT GAAGGAGATAAAACTGGCCTCAAAAACCAGTATTCTGGCAAATAAGAAGAAAATGAACAATGTATTGACGATGTGGAAGC AGAGGAGCCATGAAGGGCAGGCTACTCGTGTTGCTCTTGATGACAATCAGTCATCTATTTCAGCTGATGATAGGTCATAT TCTTCTGGACATTCTGCCAAGAATAAGTCAAAAAATGAGACTACAGTAAGGGAAAGTACTGCATCTAACCTGGGAGTTCA CACAACTCGTGCCCAGATTGCTGCTACTGATTCTCAGGCACAGCCACGGCCTGTCAGTAATAGCCTTGGGGGGACTCTGA TGGGGGTTATAAGAGGCTCAGGAAGAGGGGCTGTCAAATCAGATGCTTCTTATTCTGGTTCTACAACTGCTGCACCGTCT ATGGCAAGTTCATCTTCAGCCAATATTGATGGACAGTCAACTCCCACTCCCTATAGAACAGATGTCTCTGCCCTGGGTTC ATACACACCATCTGTGACTGCTGGAAGTGGACGGAGAAGGTTTTCAGAAATGCCTCATTCTGCTTCAACTCAGAAGGAAC TACCTCAAACTACCTACAGGGACCGTGCAGCTGAGAGGAGAAGTTTGTATGGCTCATCATCGTCAATTGGAAATGATTTG GAAGACCTTGATATTGGGGATTCAAGTAAGATTGCTTAATTTGTACTGGGTTTCATTGTTTTTTCAGTTCAATACTATCT GAAAAATTTCTGATGTCAAGGAAGTATTAGCTTTTATAGTACTAGTTTAGTTGTACTTCAAAACATTGACGGGTGCCTGA TGAAAAAGGCTATGGAAATAGAGGTTGCTTTAGTTTTACTCTAGGTTTTAAGCATGACATTGTTTTAAGGGAAATTGAAG AAGTCTTCATGGTAGGGAAATCAAACATTTATTTTTTGTTATTTTGTCCTTTTAAGAAGTCGAACTTAATTATGACTGTG TCTGTATAATTGATGCTGTTTGTGTGTATGTATCTTTGTAAATAGAACTGTTTCCCCCCTTTTTATGAAGCCCAGAATTT ACATTTTAGAAGGTTCTGTTATAGCATATAGTTGATGTTTAGCAACAAATGTTACTATAGTAATTGAAATTTTAAATAAC CGAAAAGTAGGTTCGCATACCAATAGGCCCACTGGTAAATTTATATCTCAGATATGTGGATTGACTTTTGAGGAAATATT TGTTTCTACCATATGTATCCTTGAAGATCGAGATTTCACGTCAAGGAAGGGTGATCCAATGCCATTCCCTCCTGGGGTTG GTGGAGGGCGCACAGTTGGAGATGTCAACCTTGATACTTTTGAAGTGATTGCGGCAGACAAGGCAATTGATGAAAACAAT GTTGGTAATCGGATGCTTCGCAACATGGGATGGCAGGAAGGCTTGGTATCATTTCATTCTCTCTTCTCCACATAAGTTTC TACATTTATTATTGTTATTAGAGGTGTTTGGTGGATCTTGATACAGTCAGTTGTTTATATGTGCAAGCGTCATGAGTTTT CTGGGATGTGCTAGTCACTTTAAATCCCAGAACTAGAAAAAAAAAATTCGGCATTTTTTCTTTTTGCAACCCCACGAATT CGATGGGATACCCTTGGATACATTTGGTGTTCTCTATCAAGTCTCAACATATTCTAACATTTACATGTTATGGTTGTTTT TTGTATTATGGATAATTTGATACACAGGGATTAGGAAAGGATGGGAGTGGAATGATAGAGCCTGTCCAGACACAAGCCAT GGAAAATAGAGCAGGACTTGGGAGTCAGCAGAAGAAGCTTGACCCTAGCCTCGAGGTGCAAGCAGGGGACAGTTACAAGA TGCTTATTCATAAAAAAGCAGTTGCGAGGTTTCGGGAAATGTCGTAGAGTTAA
CDS sequence (LotjaGi4g1v0147400.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTACCAAGAATATGATAAATTTCAGGATGACTATACCAGCATTGAAAATTATGCTGATCGAGGATATGATAAACCTGC CAGGTTTGCAGGAGATGACCGTGATGATTATGCATATGATGATTATGGCTACAAGTCGCGTGTTTCTCACCACCGCAGGG AGGATAGCCATGAGAGGGATTATGATCATGGTCGGCATAGTTATGATTCTGATTATGATAGAGGCAATAGAAGAGATAGT AATTGGAGGCAACGTGAATCACGAGAACGAGATACGAAAGGCCTTAGTCGGGAAAGAGATCTGAGTCCACATAGGAAACA TGAGCGTTCCCATTCCCATTCCCGGTCTCGTTCCCGTTCTCGATCACGGCGTTCCCGTTCTCGATCACATTCCCATTCCC ATTCCCGTTCTCGTTCCCAATCTCGTGGATATGATGATCATCCAAGATCTAGGTCCCCTAGAGGTCGAAGTCATAGTCGT AGTTATCGGGAAGACAGCTATGTTGACAGTCAATATGATAGAAGTGAAAGACGTAGGGATCGTGAGGATAAACGTCAGCG TGAGCATTATTCTGTGGCCCCATCTGCAACTGTTGTTGTGAAAGGTCTTTCACAGAAGACAACTGAAGAAGATTTATACC AAATCCTTGCGGAATGGGGACCCCTTCGTCATGTTCGTGTTATAAAGGAGAGAAATTCTGGCCTCTCTCGTGGATTTGCA TTTATTGATTTTCCTTCTGTGGGAGCTGCACAAGGTATGATGGACAAACTAGGAGATGAAGGTCTTGTCGTGGATGGAAG AAAGCTTTTCTTTGAATATAGTAGTAAGCCAACTGGAGGTGCAGGTCCAGATGGAGCTATGAAACCTGGTCATAGTCATA AGAGCATTACAGTACCATCTGATTGGATGTGCACTATATGTAGCTACATCAATTTTGCACGCCGGACTTCCTGTTATCAG TGTAATGAGCCACGGACAGATGATGCTCCTGCAGCAGATATTTCATCATCTAATTCGGCAGCCTTGGGAAAGAAAGGCTT GGAGGCAGGTCCAACCCATGTTTTGGTTGTCCGTGGATTGGATGAAAATGCTGATGAGGAAATGCTCCGCTATGAGTTTT CCAAACATTCTCCAATCAAGGATCTACGTCTTGTGAGAGACAAGTTTACTCATGTCTCAAGGGGTTTTGCTTTTGTACAC TTTTACTCGGTGGAGGATGCTACAAAAGCTCTTGAGGCAACAAATGGAACAACTCTTGAGAAGAATGGGCAGATTCTAAG AGTAGCATATGCAAAAAGTATACTCGGACCTGGATCAGGAGCATCAGGAACTTCCCAATCAAGCAGTCTTGCAGCTGCTG CTATTGAGGCTGCAACATTTGCCCAACAGTATGATTCTGTGGGATGGGCTCCAAAAGAATACAATGCAGATGACAAACAA TGTACTGCTCCAGCGCAAACTGGCACTGAAGTTGGTGCTCCACAATCTGGCTTTGTGTGGGATGAAGCATCGGGATATTA CTATGATGCTGCTTCTGGTTTTTATTATGATGGGAATACTGGTCTTTACTATGATGGTAATAATGGGATATGGTATTCAT ATGATCACCAGACTCAGCAGTACATCCCTTGCACTGATCAAAATCAGAATAAAACAGCTAATAGTGAGTCCGAACCTTCT AAGGCATCAGATGGCCCCAGCAGTAAAAAGGTGGTGATTTCTGCACCAGCTACAACTGTTACATCAATTGAGAAGCCAGC TTCGTTGGCAGATGCTGTCCAGGCTGCTGCAACTGCTGCTTTAGCTGCAGAGAAGAAAGAGAAAGAAAAATTGAAGGAGA TAAAACTGGCCTCAAAAACCAGTATTCTGGCAAATAAGAAGAAAATGAACAATGTATTGACGATGTGGAAGCAGAGGAGC CATGAAGGGCAGGCTACTCGTGTTGCTCTTGATGACAATCAGTCATCTATTTCAGCTGATGATAGGTCATATTCTTCTGG ACATTCTGCCAAGAATAAGTCAAAAAATGAGACTACAGTAAGGGAAAGTACTGCATCTAACCTGGGAGTTCACACAACTC GTGCCCAGATTGCTGCTACTGATTCTCAGGCACAGCCACGGCCTGTCAGTAATAGCCTTGGGGGGACTCTGATGGGGGTT ATAAGAGGCTCAGGAAGAGGGGCTGTCAAATCAGATGCTTCTTATTCTGGTTCTACAACTGCTGCACCGTCTATGGCAAG TTCATCTTCAGCCAATATTGATGGACAGTCAACTCCCACTCCCTATAGAACAGATGTCTCTGCCCTGGGTTCATACACAC CATCTGTGACTGCTGGAAGTGGACGGAGAAGGTTTTCAGAAATGCCTCATTCTGCTTCAACTCAGAAGGAACTACCTCAA ACTACCTACAGGGACCGTGCAGCTGAGAGGAGAAGTTTGTATGGCTCATCATCGTCAATTGGAAATGATTTGGAAGACCT TGATATTGGGGATTCAAATCGAGATTTCACGTCAAGGAAGGGTGATCCAATGCCATTCCCTCCTGGGGTTGGTGGAGGGC GCACAGTTGGAGATGTCAACCTTGATACTTTTGAAGTGATTGCGGCAGACAAGGCAATTGATGAAAACAATGTTGGTAAT CGGATGCTTCGCAACATGGGATGGCAGGAAGGCTTGGGATTAGGAAAGGATGGGAGTGGAATGATAGAGCCTGTCCAGAC ACAAGCCATGGAAAATAGAGCAGGACTTGGGAGTCAGCAGAAGAAGCTTGACCCTAGCCTCGAGGTGCAAGCAGGGGACA GTTACAAGATGCTTATTCATAAAAAAGCAGTTGCGAGGTTTCGGGAAATGTCGTAG
Protein sequence (LotjaGi4g1v0147400.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MYQEYDKFQDDYTSIENYADRGYDKPARFAGDDRDDYAYDDYGYKSRVSHHRREDSHERDYDHGRHSYDSDYDRGNRRDS NWRQRESRERDTKGLSRERDLSPHRKHERSHSHSRSRSRSRSRRSRSRSHSHSHSRSRSQSRGYDDHPRSRSPRGRSHSR SYREDSYVDSQYDRSERRRDREDKRQREHYSVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGLSRGFA FIDFPSVGAAQGMMDKLGDEGLVVDGRKLFFEYSSKPTGGAGPDGAMKPGHSHKSITVPSDWMCTICSYINFARRTSCYQ CNEPRTDDAPAADISSSNSAALGKKGLEAGPTHVLVVRGLDENADEEMLRYEFSKHSPIKDLRLVRDKFTHVSRGFAFVH FYSVEDATKALEATNGTTLEKNGQILRVAYAKSILGPGSGASGTSQSSSLAAAAIEAATFAQQYDSVGWAPKEYNADDKQ CTAPAQTGTEVGAPQSGFVWDEASGYYYDAASGFYYDGNTGLYYDGNNGIWYSYDHQTQQYIPCTDQNQNKTANSESEPS KASDGPSSKKVVISAPATTVTSIEKPASLADAVQAAATAALAAEKKEKEKLKEIKLASKTSILANKKKMNNVLTMWKQRS HEGQATRVALDDNQSSISADDRSYSSGHSAKNKSKNETTVRESTASNLGVHTTRAQIAATDSQAQPRPVSNSLGGTLMGV IRGSGRGAVKSDASYSGSTTAAPSMASSSSANIDGQSTPTPYRTDVSALGSYTPSVTAGSGRRRFSEMPHSASTQKELPQ TTYRDRAAERRSLYGSSSSIGNDLEDLDIGDSNRDFTSRKGDPMPFPPGVGGGRTVGDVNLDTFEVIAADKAIDENNVGN RMLRNMGWQEGLGLGKDGSGMIEPVQTQAMENRAGLGSQQKKLDPSLEVQAGDSYKMLIHKKAVARFREMS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 16 | 190 | 175 | - | – | |
| MobiDBLite | 16 | 107 | 92 | - | – | |
| PANTHER | 24 | 134 | 111 | 0.0 | – | |
| PANTHER | 24 | 134 | 111 | 0.0 | – | |
| MobiDBLite | 108 | 137 | 30 | - | – | |
| SUPERFAMILY | 114 | 274 | 161 | 1.88E-19 | ||
| PANTHER | 135 | 950 | 816 | 0.0 | – | |
| PANTHER | 135 | 950 | 816 | 0.0 | – | |
| MobiDBLite | 138 | 190 | 53 | - | – | |
| Gene3D | 175 | 283 | 109 | 2.7E-20 | ||
| CDD | 194 | 274 | 81 | 2.06698E-26 | – | |
| ProSiteProfiles | 196 | 276 | 81 | 15.835 | ||
| SMART | 197 | 272 | 76 | 1.0E-18 | ||
| Pfam | 198 | 257 | 60 | 6.3E-12 | ||
| Gene3D | 291 | 329 | 39 | 3.3E-10 | – | |
| SUPERFAMILY | 294 | 328 | 35 | 4.45E-9 | ||
| ProSiteProfiles | 298 | 327 | 30 | 9.665 | ||
| SMART | 300 | 324 | 25 | 5.1E-7 | ||
| ProSitePatterns | 302 | 321 | 20 | - | ||
| Gene3D | 333 | 461 | 129 | 7.5E-24 | ||
| CDD | 351 | 431 | 81 | 7.20814E-30 | – | |
| SUPERFAMILY | 351 | 438 | 88 | 7.66E-25 | ||
| ProSiteProfiles | 353 | 433 | 81 | 17.694 | ||
| SMART | 354 | 429 | 76 | 2.9E-23 | ||
| Pfam | 355 | 421 | 67 | 6.7E-17 | ||
| CDD | 492 | 544 | 53 | 6.95734E-25 | ||
| Pfam | 495 | 544 | 50 | 1.1E-19 | ||
| MobiDBLite | 547 | 570 | 24 | - | – | |
| MobiDBLite | 547 | 564 | 18 | - | – | |
| MobiDBLite | 642 | 712 | 71 | - | – | |
| MobiDBLite | 642 | 852 | 211 | - | – | |
| MobiDBLite | 731 | 780 | 50 | - | – | |
| MobiDBLite | 787 | 801 | 15 | - | – | |
| SMART | 873 | 919 | 47 | 1.7E-12 | ||
| ProSiteProfiles | 875 | 921 | 47 | 16.853 | ||
| Pfam | 876 | 917 | 42 | 2.4E-12 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. |
Expression pattern of LotjaGi4g1v0147400.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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