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PF01585

Source: Pfam

Description

G-patch domain

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003676
Molecular function Nucleic acid binding Interacting selectively and non-covalently with any nucleic acid.
Subterm of

Associated Lotus transcripts 52

Transcript Name Description Predicted domains Domain count
Lj0g3v0074159.1
– Gag-pro-like protein [Theobroma cacao] gi|508716038|gb|EOY07935.1|
Domains
10
Lj0g3v0130119.1
– PREDICTED: G patch domain-containing protein 8-like [Glycine max] gi|356505733|ref|XP_003521644.1|
Domains
12
Lj0g3v0325829.1
– PREDICTED: SURP and G-patch domain-containing protein 1-like protein-like [Glycine max] gi|356557138|ref|XP_003546875.1|
Domains
11
Lj0g3v0327279.1
– Zinc finger CCCH-type with G patch domain-containing protein [Medicago truncatula] gi|357478467|ref|XP_003609519.1|
Domains
11
Lj0g3v0327279.2
– Zinc finger CCCH-type with G patch domain-containing protein [Medicago truncatula] gi|357478467|ref|XP_003609519.1|
Domains
13
Lj0g3v0363599.1
– Zinc finger CCCH-type with G patch domain-containing protein [Medicago truncatula] gi|357478467|ref|XP_003609519.1|
Domains
8
Lj0g3v0363599.2
– Zinc finger CCCH domain-containing protein [Arabidopsis thaliana] gi|334182742|ref|NP_173577.2|
Domains
11
Lj1g3v0330950.1
– RNA-binding protein [Medicago truncatula] gi|357461869|ref|XP_003601216.1|
Domains
7
Lj1g3v2155530.1
– PREDICTED: tuftelin-interacting protein 11-like [Glycine max] gi|356559565|ref|XP_003548069.1|
Domains
14
Lj2g3v0440420.1
– Gag-pro-like protein [Theobroma cacao] gi|508775680|gb|EOY22936.1|
Domains
5
Lj2g3v2925120.1
– PREDICTED: DNA-damage-repair/toleration protein DRT111, chloroplastic-like [Glycine max] gi|356521610|ref|XP_003529447.1|
Domains
17
Lj2g3v3317710.1
– PREDICTED: SURP and G-patch domain-containing protein 1-like protein-like isoform X5 [Cicer arietinum] gi|502157971|ref|XP_004510976.1|
Domains
11
Lj2g3v3317710.2
– Os09g0281600 [Oryza sativa Japonica Group] gi|115478346|ref|NP_001062768.1|
Domains
6
Lj3g3v0478110.1
– Os09g0281600 [Oryza sativa Japonica Group] gi|115478346|ref|NP_001062768.1|
Domains
6
Lj3g3v0478110.2
– PREDICTED: SURP and G-patch domain-containing protein 1-like protein-like isoform X5 [Cicer arietinum] gi|502157971|ref|XP_004510976.1|
Domains
11
Lj4g3v0668270.1
– DNA-damage-repair/toleration protein DRT111 [Medicago truncatula] gi|357475093|ref|XP_003607832.1|
Domains
18
Lj4g3v2376320.2
– PREDICTED: coiled-coil domain-containing protein 75-like [Glycine max] gi|356536473|ref|XP_003536762.1|
Domains
9
Lj4g3v2990160.1
– PREDICTED: PIN2/TERF1-interacting telomerase inhibitor 1-like isoform X2 [Cicer arietinum] gi|502139178|ref|XP_004503672.1|
Domains
7
Lj5g3v2263950.1
– PREDICTED: coiled-coil domain-containing protein 75-like [Glycine max] gi|356536473|ref|XP_003536762.1|
Domains
7
Lj6g3v0831440.1
– PREDICTED: zinc finger CCCH domain-containing protein 18-like [Cicer arietinum] gi|502166431|ref|XP_004513890.1|
Domains
8
Lj6g3v0831440.2
– PREDICTED: zinc finger CCCH domain-containing protein 18-like [Glycine max] gi|356567208|ref|XP_003551813.1|
Domains
12
LotjaGi1g1v0078900_LC.1
– Zinc finger CCCH domain protein, putative; TAIR: AT1G21580.1 Zinc finger C-x8-C-x5-C-x3-H type family protein; Swiss-Prot: sp|Q3ED78|C3H7_ARATH Zinc finger CCCH domain-containing protein 7; TrEMBL-Plants: tr|K7LY40|K7LY40_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0078900_LC
Domains
11
LotjaGi1g1v0176900.1
– D111/G-patch domain protein; TAIR: AT4G34140.1 D111/G-patch domain-containing protein; Swiss-Prot: sp|Q99KG3|RBM10_MOUSE RNA-binding protein 10; TrEMBL-Plants: tr|I1JXA4|I1JXA4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0176900
Domains
10
LotjaGi1g1v0427300.1
– Tuftelin interacting protein 11 domain containing protein; TAIR: AT1G17070.1 GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain-containing protein; Swiss-Prot: sp|Q9SHG6|STIP1_ARATH Septin and tuftelin-interacting protein 1 homolog 1; TrEMBL-Plants: tr|A0A0B2RLS8|A0A0B2RLS8_GLYSO Tuftelin-interacting protein 11; Found in the gene: LotjaGi1g1v0427300
Domains
14
LotjaGi1g1v0427300.2
– Tuftelin interacting protein 11 domain containing protein; TAIR: AT1G17070.1 GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain-containing protein; Swiss-Prot: sp|Q9SHG6|STIP1_ARATH Septin and tuftelin-interacting protein 1 homolog 1; TrEMBL-Plants: tr|A0A0B2RLS8|A0A0B2RLS8_GLYSO Tuftelin-interacting protein 11; Found in the gene: LotjaGi1g1v0427300
Domains
14
LotjaGi1g1v0427300.3
– Tuftelin interacting protein 11 domain containing protein; TAIR: AT1G17070.1 GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain-containing protein; Swiss-Prot: sp|Q9SHG6|STIP1_ARATH Septin and tuftelin-interacting protein 1 homolog 1; TrEMBL-Plants: tr|A0A0B2RLS8|A0A0B2RLS8_GLYSO Tuftelin-interacting protein 11; Found in the gene: LotjaGi1g1v0427300
Domains
14
LotjaGi1g1v0751700.1
– G-patch domain-containing protein; TAIR: AT5G26610.1 D111/G-patch domain-containing protein; Swiss-Prot: sp|A2A6A1|GPTC8_MOUSE G patch domain-containing protein 8; TrEMBL-Plants: tr|I3T461|I3T461_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0751700
Domains
7
LotjaGi1g1v0751700.2
– G-patch domain-containing protein; TAIR: AT5G26610.1 D111/G-patch domain-containing protein; Swiss-Prot: sp|Q9UKJ3|GPTC8_HUMAN G patch domain-containing protein 8; TrEMBL-Plants: tr|I3T461|I3T461_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0751700
Domains
13
LotjaGi3g1v0059200.2
– G-patch domain-containing protein; TAIR: AT3G52120.1 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein; Swiss-Prot: sp|Q94C11|SUGP1_ARATH SURP and G-patch domain-containing protein 1-like protein; TrEMBL-Plants: tr|V7BWV7|V7BWV7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0059200
Domains
15
LotjaGi3g1v0059200.3
– G-patch domain-containing protein; TAIR: AT3G52120.1 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein; Swiss-Prot: sp|Q94C11|SUGP1_ARATH SURP and G-patch domain-containing protein 1-like protein; TrEMBL-Plants: tr|V7BWV7|V7BWV7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0059200
Domains
15
LotjaGi3g1v0059200.5
– G-patch domain-containing protein; TAIR: AT3G52120.1 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein; Swiss-Prot: sp|Q94C11|SUGP1_ARATH SURP and G-patch domain-containing protein 1-like protein; TrEMBL-Plants: tr|V7BWV7|V7BWV7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0059200
Domains
15
LotjaGi3g1v0124100.1
– G-patch domain-containing protein; TAIR: AT3G52120.1 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein; Swiss-Prot: sp|Q94C11|SUGP1_ARATH SURP and G-patch domain-containing protein 1-like protein; TrEMBL-Plants: tr|A0A0S3SJH4|A0A0S3SJH4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0124100
Domains
15
LotjaGi3g1v0124100.2
– G-patch domain-containing protein; TAIR: AT3G52120.1 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein; Swiss-Prot: sp|Q94C11|SUGP1_ARATH SURP and G-patch domain-containing protein 1-like protein; TrEMBL-Plants: tr|A0A0S3SJH4|A0A0S3SJH4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0124100
Domains
15
LotjaGi3g1v0547500.1
– Gag-pro; TAIR: AT3G57910.1 D111/G-patch domain-containing protein; Swiss-Prot: sp|Q6GQ76|CMTR1_XENLA Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1; TrEMBL-Plants: tr|A0A061EXR3|A0A061EXR3_THECC Uncharacterized protein; Found in the gene: LotjaGi3g1v0547500
Domains
11
LotjaGi4g1v0086400.1
– Splicing factor; TAIR: AT1G30480.1 D111/G-patch domain-containing protein; Swiss-Prot: sp|P42698|DR111_ARATH DNA-damage-repair/toleration protein DRT111, chloroplastic; TrEMBL-Plants: tr|V7CI72|V7CI72_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0086400
Domains
19
LotjaGi4g1v0147400.1
– RNA-binding protein, putative; TAIR: AT3G54230.2 suppressor of abi3-5; Swiss-Prot: sp|F4JCU0|SUA_ARATH SUPPRESSOR OF ABI3-5; TrEMBL-Plants: tr|A0A072U387|A0A072U387_MEDTR RNA-binding protein, putative; Found in the gene: LotjaGi4g1v0147400
Domains
27
LotjaGi4g1v0147400.3
– RNA-binding protein, putative; TAIR: AT3G54230.2 suppressor of abi3-5; Swiss-Prot: sp|F4JCU0|SUA_ARATH SUPPRESSOR OF ABI3-5; TrEMBL-Plants: tr|A0A072U387|A0A072U387_MEDTR RNA-binding protein, putative; Found in the gene: LotjaGi4g1v0147400
Domains
27
LotjaGi4g1v0147400.4
– RNA-binding protein, putative; TAIR: AT3G54230.2 suppressor of abi3-5; Swiss-Prot: sp|F4JCU0|SUA_ARATH SUPPRESSOR OF ABI3-5; TrEMBL-Plants: tr|A0A072U387|A0A072U387_MEDTR RNA-binding protein, putative; Found in the gene: LotjaGi4g1v0147400
Domains
27
LotjaGi4g1v0147400.5
– RNA-binding protein, putative; TAIR: AT3G54230.2 suppressor of abi3-5; Swiss-Prot: sp|F4JCU0|SUA_ARATH SUPPRESSOR OF ABI3-5; TrEMBL-Plants: tr|A0A072TS81|A0A072TS81_MEDTR RNA-binding protein, putative; Found in the gene: LotjaGi4g1v0147400
Domains
27
LotjaGi4g1v0164000_LC.1
– G-patch domain-containing protein; TAIR: AT1G63980.1 D111/G-patch domain-containing protein; Swiss-Prot: sp|Q6GQ76|CMTR1_XENLA Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1; TrEMBL-Plants: tr|A0A151R2D5|A0A151R2D5_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0164000_LC
Domains
5
LotjaGi4g1v0282900.1
– Zinc finger family protein / D111/G-patch domain-containing protein; TAIR: AT3G09850.1 D111/G-patch domain-containing protein; Swiss-Prot: sp|Q9UTK6|YKR3_SCHPO G-patch domain-containing protein C1486.03; TrEMBL-Plants: tr|I1LZN2|I1LZN2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0282900
Domains
10
LotjaGi4g1v0349100_LC.2
– Pyruvate dehydrogenase E1 component subunit beta; TAIR: AT3G52350.1 D111/G-patch domain-containing protein; Swiss-Prot: sp|P52904|ODPB_PEA Pyruvate dehydrogenase E1 component subunit beta, mitochondrial; TrEMBL-Plants: tr|A0A0D6DQF0|A0A0D6DQF0_LUPAN Similar to uncharacterized protein; Found in the gene: LotjaGi4g1v0349100_LC
Domains
8
LotjaGi4g1v0430200.1
– D111/G-patch domain protein; TAIR: AT1G63980.2 D111/G-patch domain-containing protein; Swiss-Prot: sp|Q96BK5|PINX1_HUMAN PIN2/TERF1-interacting telomerase inhibitor 1; TrEMBL-Plants: tr|I1K6E1|I1K6E1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0430200
Domains
7
LotjaGi5g1v0141800_LC.1
– Pyruvate dehydrogenase E1 component subunit beta; TAIR: AT3G52350.1 D111/G-patch domain-containing protein; Swiss-Prot: sp|P52904|ODPB_PEA Pyruvate dehydrogenase E1 component subunit beta, mitochondrial; TrEMBL-Plants: tr|A0A0D6DQF0|A0A0D6DQF0_LUPAN Similar to uncharacterized protein; Found in the gene: LotjaGi5g1v0141800_LC
Domains
8
LotjaGi5g1v0141800_LC.2
– Pyruvate dehydrogenase E1 component subunit beta; TAIR: AT3G52350.1 D111/G-patch domain-containing protein; Swiss-Prot: sp|P52904|ODPB_PEA Pyruvate dehydrogenase E1 component subunit beta, mitochondrial; TrEMBL-Plants: tr|A0A0D6DQF0|A0A0D6DQF0_LUPAN Similar to uncharacterized protein; Found in the gene: LotjaGi5g1v0141800_LC
Domains
8
LotjaGi5g1v0141800_LC.3
– Pyruvate dehydrogenase E1 component subunit beta; TAIR: AT3G52350.1 D111/G-patch domain-containing protein; Swiss-Prot: sp|P52904|ODPB_PEA Pyruvate dehydrogenase E1 component subunit beta, mitochondrial; TrEMBL-Plants: tr|A0A0D6DQF0|A0A0D6DQF0_LUPAN Similar to uncharacterized protein; Found in the gene: LotjaGi5g1v0141800_LC
Domains
10
LotjaGi5g1v0142300.1
– G-patch domain containing protein, expressed; TAIR: AT3G57910.1 D111/G-patch domain-containing protein; Swiss-Prot: sp|Q6DGZ0|GPT11_DANRE G patch domain-containing protein 11; TrEMBL-Plants: tr|I1JG45|I1JG45_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0142300
Domains
12
LotjaGi5g1v0142300.2
– G-patch domain containing protein, expressed; TAIR: AT3G57910.1 D111/G-patch domain-containing protein; Swiss-Prot: sp|Q6DGZ0|GPT11_DANRE G patch domain-containing protein 11; TrEMBL-Plants: tr|I1JG45|I1JG45_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0142300
Domains
12
LotjaGi5g1v0355300.1
– G-patch domain containing protein, expressed; TAIR: AT5G08535.1 D111/G-patch domain-containing protein; Swiss-Prot: sp|Q6C233|SQS1_YARLI Protein SQS1; TrEMBL-Plants: tr|A0A0D6DQF0|A0A0D6DQF0_LUPAN Similar to uncharacterized protein; Found in the gene: LotjaGi5g1v0355300
Domains
8
LotjaGi5g1v0355300.2
– G-patch domain containing protein, expressed; TAIR: AT5G08535.1 D111/G-patch domain-containing protein; Swiss-Prot: sp|Q6C233|SQS1_YARLI Protein SQS1; TrEMBL-Plants: tr|A0A0D6DQF0|A0A0D6DQF0_LUPAN Similar to uncharacterized protein; Found in the gene: LotjaGi5g1v0355300
Domains
8
LotjaGi6g1v0155100.1
– Zinc finger CCCH-type with G patch domain protein; TAIR: AT2G24830.1 zinc finger (CCCH-type) family protein / D111/G-patch domain-containing protein; Swiss-Prot: sp|Q6K687|C3H18_ORYSJ Zinc finger CCCH domain-containing protein 18; TrEMBL-Plants: tr|I1N0J9|I1N0J9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0155100
Domains
11
LotjaGi6g1v0155100.2
– Zinc finger CCCH-type with G patch domain protein; TAIR: AT2G24830.1 zinc finger (CCCH-type) family protein / D111/G-patch domain-containing protein; Swiss-Prot: sp|Q6K687|C3H18_ORYSJ Zinc finger CCCH domain-containing protein 18; TrEMBL-Plants: tr|I1N0J9|I1N0J9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0155100
Domains
11

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 1.92