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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0157000 |
| Transcript ID | LotjaGi4g1v0157000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor protein kinase, putative; TAIR: AT1G51940.1 protein kinase family protein / peptidoglycan-binding LysM domain-containing protein; Swiss-Prot: sp|F4IB81|LYK3_ARATH LysM domain receptor-like kinase 3; TrEMBL-Plants: tr|I1KXB8|I1KXB8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0157000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:27345474..27352030) extracted from Lotus japonicus Gifu genome v1.2.
GATATCTATTATAGTTATAATCAACATTAATGGTTAATGCTGAGTTTGACAAAAGGGTATCGGATTATTATAATAATATA GGCGACTTGAAATGTTTCTGTTCCTCGGAAGTGTCAACAATCAAGTGATGACAAGACCAACTGGTGCACCTTAAAACTTG TTCTATCTTTTCCTCCTCCTCTCCCTTCACCAGGGATCACAAATATGGCTTCTTTCACTCAGCTTTTTTCTTTTCTTTTC CCTCTGTTGGCGACTTCATTACATAGAATTTCAGCCTTTGAAGTTTCCATAAAAACGTCTGTTATAGCTCCTCTTAATTG CTCTGCCAATATCAAAACATGTAATGCCTTCCTCTACCACATAAGCCACAATCACACAGTTGAAGAAATTGCCACCTTTT ACTCCGTTAGTTCTTCCCAAATCAATCCTATAATGTATAGAACCAGACAAGATTACCTCATAACAGTACCTTGTTCTTGC AAAATAACCAATGAACTTAGCGGATATTTCTATGATACAACCTACACAGTCAGGCCAAATGACATTTTCTCGAATATTTC AGACCTGATTTACAGTGGCCAAGCCTGGCCAGTTACCGGTACGTTGTTTCCGGAAGAGCATTTATCGATACATATTCCAT GTGGGTGTTCAGAAAATGAGTCTCAAATAGTTGTCACCTACACAGTTCAGCAGAATGATACACAAACAACTATTGCTAAT CTGTTAAATTCTACACGGGCTGGCATACTGAGCATGAACATAATTCTAGATAAGAACACTGGTTTCATAGACCTTGGTTG GGTGCTGTTTGTTCCCAAGGAATTGAAAGGGCTTCGTGTTCCACCTTCTAACAAAAAAGGTGACTCCTCTCCATGTTTTT CACTTTACTTTCTTCAGCAATTTGCATGTAAATATAGAGTAAGAAATTAGTATTTAGCTATATGCTATGGTGTATTAGAA ATTAGAAAATACTCCGTGATGATTCATAACTTAAATACTGCAATAAGATTACATTGTTTCAGCAAGCTTTGAACTTTGAT CAACAGCAGTGATGTACTTCAATTTGCAAAATCAAGGCTAGCATTGGTATTCCTGTTAATAACCTCAGCAATTTTTTTCT AGAGGTTTTATATCGCTAATCATTGAACGAAACTAAGTGACATTGAGTTAGAAAAGTGGAAATTGTGGGAATTTATTACA TTGAAAAAATTAATAAAGCATATATTAAGAAAGTAGGTATCTGAGCTTTTCATTGGATAATAATACAAACAGTAACCAAA GTACTATATCTAAATTTTATCCGTTTGCATTTATGTGTGCCCCTGCCCTCTTAGTTAAATCTTCAAAATGATTGCTCTTT AGAAATAACAAATATTTCATTGAACTATTTTCACTTCATCTGATAATGTTTTTCATGGTTTAAATTCAATCCTAGAAATA GGGTCAAGTGGGTAATGGACTTGTATGTTTAATCAAATGATGCTCACTGACCAGGTAAAGTTTGGATAGATAGATTTCAT CCAAACAAATTAAACAGATGCTTTTGTGTGTTAACACTCACTCTTGATGTCAATTCCTCTTCCTTTGATTTTTCCCATGT TGGCAGAAAAGAAACATAAGAACTGGATAATCATCATTGGCATCTTAGCGGGCGTGGTATTACTTTCAATTATTGCAATC ATCATTGTCATTCTCAGGAGAAAAGGAGCCAATCAAATCAGCAAAGAAGATTCACAAGTTGTCTCTAAAAGATCAATTCG CAGTAGAAAATTCTCCTCAATGAACAGTAACCTTCATACGCGATACATTTCTGGTAATTTAAAATGCCAACATAAATTTT GTTAGTAATTGTCTCTGTTAGGAGACTGAGAGGAGGACTATTGCATATTCATGTAAATATTGGTGCAGATGCAATGTCAA TAGAATCAGAAAGACCAGTAGTGTACAACCTTGATGACATTGAAGAGGCTACAAATTACTTTGATGAAACTCAAAAAATT GGAAGGGGTGGATTTGGGAGTGTGTATTTCGGAATGTTAGGGAAGACGGTATGCAAATCCCACCTAGACTGTTTAGATGT AATCCAAAGTGAAATTGCATTCTCTTAATGCACTGAATGCTAATTAAGAATTGGGGTGTTTTTTTTATCACAGGAGGTTG CTGTGAAGAAGATGAGGTCTAATAAATCTAGAGAGTTCTATGCAGAACTCAAGGTGTTGTGTAGGATCAATCATATCAAC ATTGTAAGTGATACCTCTGATGATGGTTCTTTGATATATATAGTCTTAAAGATATGATGTTTGAATATACCACTGATATA TAATCACTGTTGCAGGTGGAGCTGTTGGGATATGCCAGTGGAGAAGATCACCTCTATTTGGTGTATGAGTATGTATCAAA TGGATCTCTTAGTGACCATCTTCATGATCCATTACTAAAAGGTATATTGGATCCAAGATCCATGAACTGATCGGGTGAAT GATTAGTATTCAGTTTTCAGTAACACCATAAAGGCCACAAAGGTACTAGAAACCCATTTGGATGCGGACTAAAGATCACT CATGTTTTTCCTAGTAGATAAGCTCCAATTAATGTTCTTTTGTTTGTATCCAAACTAAATCTAGTTCAGGTGCATAGTGC AATGCATTCCTTTTAGTTTAGGAAAAAGTCAAATATTTTTAGATATATACCAATAAATCTAAGACCTGGTGGTGGAACTG GAACAGGTTACCAGCCTCTTTCATGGAGTGCTAGGGTTCAGATTGCACTTGATGCTGCAAAAGGTCTTGAATATATACAT GATCATACGAAAGCACGATATGTTCACCGAGATATAAAGACTAGCAATATCCTTCTTGACGAAAAGCTCAGAGCTAAGGT AACTTGAGTTCATTTCTTTTATTCTGACTTGAAATTTATATCTTTGAAGTTTTTTTTCTAAAGGAAAAATCATTGACAAG TAACAAATATTCTAATAATGGACAATCATGGTGCTACAAATCTCCCGTTATGCGCACGAGGTCTACGGAGGGACATTAAC CTGAATCATCTGTTCACTTTTGTCATCAGAATACAATGTTAACATTCATTTACAATTAAACAAAAAAGATGCTCTTCAAT CATTATACTTGTACTTCTAAGAAATACTAACTGCTTACCAAAGATTTCAGTATTAAGTTGCTGTCAATTCTGTGTACTAA AGGTAGGAGATTTTGGACTTGCAAAGCTAGTAGACAGAACCAATGATGAAAGTTTTATAGCAACAAGGCTTGTTGGAACA CCAGGCTACCTTCCACCAGAGTAGGTTTTGTGCTTTTCAATCATAATTAGAATGTTTGGTGCATTCAATGGAAAAGATAA TTTATTTCCCAATTAATTCTTTTCTAACATTCTTTATTTTTTACCTTTAAGATCTGTGAAGGAGCTTCAGGTGACCCCAA AAACTGATGTCTTTGCATTTGGAGTGGTTTTGTCAGAGCTATTAACAGGAAAACGTGCACTATTCCGAGAGAGCAAAGAA GCCACCAAAATGAACTCACTTATTACTGTTGTAAGTGTTGTGAAAATATAGAAAAACAAAGAATAAGGGGAAAGGGGGGA ATTGGATTGAAGTTTGAAAATATTTGACAGTATTTCTATGACATCCAATTACTCTATGTCAGTATATCACATTTATCACT TATCTCTCATTTCTTCCTATCTCTCTTGTGATCTACACCACCCTTTGGGTGTTTACCAATCTTTATTCTACTCGAATATA GATCAGCTTTACTATCTTATAGAAAAGAAAATGATTTATTTTATTTTATTTTATGTTTTCATCACATTCAGGTTAATAAA GTATTTCAAGATGATGACCCGATGATTGCTTTAGAAGATGTCATAGATAATAATCTCGAAGCCAGCTATCCAATGGAAGA TGTCTACAAGGTTAGATTCTACCTAGATACATGTATGATTCAATGCTTCTATGCTCCCTTTTATCCCCTGCATTTTTTTT TGTGAGGACAAGATTAATCATCATTCGGATACAAGGTACCATTTTTCTCAAAATTTGAACTTGCGTTCTTATTCTTAGGG AATTCTAACTTACCTATCATTAAACTAACATCTTATTGGTCTTTAATGCCCCTTTTAGTTTAATTTCTCCACGGAGAGTC AGTATAAAAATGGGAAAAGGTTAGTCTAGAGATTAAAATATTTGGTGCTTAGGGAATATCACTAGGTCCTTTATACTTCT CAATAATTTGTCTCTGAACATTCATGAGATGCAAACAAGAAGCCAAGCAGCAATGAATATATATTTATTGGCTTAGAGAT ATTTGGAATTGTATTTTTTAAGGAGAGTTTATTATTAAAAGATTAAACAGACATAAAAATCACTACATCATGTTGGACAA ACGAAAGGAGATCCGACAGAACCTCTTCAACCCAAACAGAGTTGGGGAAAGAGCTTGAGTTCTAAGTCAGATTATCCACA CCACAATTTACACTACGACAAACAAAAGAAAGCTTTAAAAAATAGAAAAAATGAGAATAAGTCTCAACAATCATTAATAA TTAAAACAAGATACGAACTACCCCTCATTGTTCTTCTCCACGCATCAAAAAGTAGGTATATCAGGAATCAAATTATATTT CTTTAGTTGAAACTTCATAGGTGATAGAAAAAGAGCAAACACTAAAGGGAAAAAGTTGTTTTCTCATATCAATATAATTT ACACAATATTATTACAATATAGTCTAACCCCCTAAAACGGCTAAGGTATAAAGTGTTGTAAAATGACATCTTTGAAAGAA TGGTATGGCGGAATTTTCATTGCACAACAGGTTTTGACAAGGGCCAATAACAAACTCAGAAATTTTAAGTTGTGATTACT AAATATACATAAAGAAGTATAGTTTAAAAAATACAACATGGCATAAACATATTAGTGTTAAGAGTTTAAATATACATCAT AGTTATTCACGATAAATATTTCAAAGTAGTGCTCAATTCTTTTCATTATCAAGTTTTTTTTAAAAGTATTATCGAGTTAT TAATATAAACAAATACTTTTTCTATAAGTAACTAAGGTATCACTTATTAATCAATATGATAAAAAATAATTATTACCTGA AATAAAGGATTTAAATGGAAGAATGAAGGACTGATAAGTGATGTGCTTCACTGTTTGTGAATGGGAAATCAAGAATGTAG GTTTAAAGTTTTTAAATGAGAAGGAAATTTTAATCAAATAAAAGAAAGAAAAATGTAAAAAAGATTTAAGTTTTTGTGGC AATGTAAAAGTGAAAGGGGATTGAAAAATAAAATAGTAATAATGATTTTTAATCTTGGTCATTCATGTATAGTTGAACGG TCGATATTCACTCTTCTCAGTCTTACATAAGAAAGTCTTTCTCACTAAATACACCCCTCCCACATATGAAAACCATTGTT AATTTTAATAATGACTTTTAAGGACTTACATGAATTTTCCTATTAGCTTTTATGGATCAATTCGGTTTTTTGTGTGCATG TTGAATGATTAGTTTGAATTCATTATTTGATTTATATATAATTCATTTTGCTTAAAAAAATGAATTCATTATTCCATGTA TATTTTTAATGACCAAATTGATCAACAAATTTCGTTTTTATAAAACGTTTTATGGGATTTCTTTGAAGTACTTAAGTAAC TTTTGTTATACTTTCATGTGCCAAAATAATGCTTTACTTGACAATCATTTGTCAGACTAAAGTATTATTATGTGTTTTTC AAAAAAAAAATCCATAATATTTATTGATATGTATTAAAGACTTCCAAATGATCAAGTAGAACTATTAACGTACAAGTGGA AGAAAAATAAAAAATATATTTATAACTATAAGTAGTGATGTCTAATTGTAATAACTTGTTATACTTAAGTCATATCTTAC TATGTTTAAGCAATGCCAAAGCTTATAATGTATTTGTATTTTAAATTAAAATTGTATATATGTGATGTGTCATGACTCAT GAGTGTGTTAGACAAGTATTCTTTTGCAACATGTGTCTGATGTGCCAACACAACCTTAAAAGTTTTGTCTTCCTATAATA GGATTCAAACTATATCTTTTATCCTGAAACAACCAAGACATTCCTACGATCCATACATATATTGGTGTTTTTATTTTGTC ATTCTTATTATTTGTAATATATATTCTTCAATCTCATATCAATCTTACAGATAGCAGAAATAGCAGAGTGGTGCTTACAA GAAGATCCAATGGAAAGGCCTGAAATGAGAGATGTCGTTAGGGCATTGACCCAAATTGTGATGTCCTCGATAGAGTGGGA AGCATCACTAGGCGGAAACAGTGAAGTCTTTAGCGGTTTGTATAGTGGAAGATGAAAAATCTTGTTTCTAATTACTATGT GAAATCATTAGTATAGTAAACTATCCCATGTACATTTACTGATATCATAATTATACAAGTTATATATATATATATATATA TATATATAACTTGATTAAATCGTATTGCAAATACACTTAGAAAGTTCACTAATGAAATCAAATATTTTCAATTGACT
CDS sequence (LotjaGi4g1v0157000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCTTTCACTCAGCTTTTTTCTTTTCTTTTCCCTCTGTTGGCGACTTCATTACATAGAATTTCAGCCTTTGAAGT TTCCATAAAAACGTCTGTTATAGCTCCTCTTAATTGCTCTGCCAATATCAAAACATGTAATGCCTTCCTCTACCACATAA GCCACAATCACACAGTTGAAGAAATTGCCACCTTTTACTCCGTTAGTTCTTCCCAAATCAATCCTATAATGTATAGAACC AGACAAGATTACCTCATAACAGTACCTTGTTCTTGCAAAATAACCAATGAACTTAGCGGATATTTCTATGATACAACCTA CACAGTCAGGCCAAATGACATTTTCTCGAATATTTCAGACCTGATTTACAGTGGCCAAGCCTGGCCAGTTACCGGTACGT TGTTTCCGGAAGAGCATTTATCGATACATATTCCATGTGGGTGTTCAGAAAATGAGTCTCAAATAGTTGTCACCTACACA GTTCAGCAGAATGATACACAAACAACTATTGCTAATCTGTTAAATTCTACACGGGCTGGCATACTGAGCATGAACATAAT TCTAGATAAGAACACTGGTTTCATAGACCTTGGTTGGGTGCTGTTTGTTCCCAAGGAATTGAAAGGGCTTCGTGTTCCAC CTTCTAACAAAAAAGAAAAGAAACATAAGAACTGGATAATCATCATTGGCATCTTAGCGGGCGTGGTATTACTTTCAATT ATTGCAATCATCATTGTCATTCTCAGGAGAAAAGGAGCCAATCAAATCAGCAAAGAAGATTCACAAGTTGTCTCTAAAAG ATCAATTCGCAGTAGAAAATTCTCCTCAATGAACAGTAACCTTCATACGCGATACATTTCTGATGCAATGTCAATAGAAT CAGAAAGACCAGTAGTGTACAACCTTGATGACATTGAAGAGGCTACAAATTACTTTGATGAAACTCAAAAAATTGGAAGG GGTGGATTTGGGAGTGTGTATTTCGGAATGTTAGGGAAGACGGAGGTTGCTGTGAAGAAGATGAGGTCTAATAAATCTAG AGAGTTCTATGCAGAACTCAAGGTGTTGTGTAGGATCAATCATATCAACATTGTGGAGCTGTTGGGATATGCCAGTGGAG AAGATCACCTCTATTTGGTGTATGAGTATGTATCAAATGGATCTCTTAGTGACCATCTTCATGATCCATTACTAAAAGGT TACCAGCCTCTTTCATGGAGTGCTAGGGTTCAGATTGCACTTGATGCTGCAAAAGGTCTTGAATATATACATGATCATAC GAAAGCACGATATGTTCACCGAGATATAAAGACTAGCAATATCCTTCTTGACGAAAAGCTCAGAGCTAAGGTAGGAGATT TTGGACTTGCAAAGCTAGTAGACAGAACCAATGATGAAAGTTTTATAGCAACAAGGCTTGTTGGAACACCAGGCTACCTT CCACCAGAATCTGTGAAGGAGCTTCAGGTGACCCCAAAAACTGATGTCTTTGCATTTGGAGTGGTTTTGTCAGAGCTATT AACAGGAAAACGTGCACTATTCCGAGAGAGCAAAGAAGCCACCAAAATGAACTCACTTATTACTGTTGTTAATAAAGTAT TTCAAGATGATGACCCGATGATTGCTTTAGAAGATGTCATAGATAATAATCTCGAAGCCAGCTATCCAATGGAAGATGTC TACAAGATAGCAGAAATAGCAGAGTGGTGCTTACAAGAAGATCCAATGGAAAGGCCTGAAATGAGAGATGTCGTTAGGGC ATTGACCCAAATTGTGATGTCCTCGATAGAGTGGGAAGCATCACTAGGCGGAAACAGTGAAGTCTTTAGCGGTTTGTATA GTGGAAGATGA
Protein sequence (LotjaGi4g1v0157000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASFTQLFSFLFPLLATSLHRISAFEVSIKTSVIAPLNCSANIKTCNAFLYHISHNHTVEEIATFYSVSSSQINPIMYRT RQDYLITVPCSCKITNELSGYFYDTTYTVRPNDIFSNISDLIYSGQAWPVTGTLFPEEHLSIHIPCGCSENESQIVVTYT VQQNDTQTTIANLLNSTRAGILSMNIILDKNTGFIDLGWVLFVPKELKGLRVPPSNKKEKKHKNWIIIIGILAGVVLLSI IAIIIVILRRKGANQISKEDSQVVSKRSIRSRKFSSMNSNLHTRYISDAMSIESERPVVYNLDDIEEATNYFDETQKIGR GGFGSVYFGMLGKTEVAVKKMRSNKSREFYAELKVLCRINHINIVELLGYASGEDHLYLVYEYVSNGSLSDHLHDPLLKG YQPLSWSARVQIALDAAKGLEYIHDHTKARYVHRDIKTSNILLDEKLRAKVGDFGLAKLVDRTNDESFIATRLVGTPGYL PPESVKELQVTPKTDVFAFGVVLSELLTGKRALFRESKEATKMNSLITVVNKVFQDDDPMIALEDVIDNNLEASYPMEDV YKIAEIAEWCLQEDPMERPEMRDVVRALTQIVMSSIEWEASLGGNSEVFSGLYSGR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 24 | 24 | - | – | |
| SignalP_EUK | 1 | 24 | 24 | - | – | |
| Phobius | 1 | 6 | 6 | - | – | |
| Phobius | 7 | 19 | 13 | - | – | |
| PANTHER | 7 | 616 | 610 | 3.4E-286 | – | |
| PANTHER | 7 | 616 | 610 | 3.4E-286 | – | |
| Phobius | 20 | 24 | 5 | - | – | |
| Phobius | 25 | 224 | 200 | - | – | |
| Gene3D | 144 | 218 | 75 | 7.4E-7 | ||
| TMHMM | 225 | 247 | 23 | - | – | |
| Phobius | 225 | 248 | 24 | - | – | |
| Phobius | 249 | 616 | 368 | - | – | |
| Gene3D | 283 | 383 | 101 | 1.8E-25 | – | |
| SUPERFAMILY | 295 | 588 | 294 | 1.62E-78 | ||
| ProSiteProfiles | 312 | 593 | 282 | 42.11 | ||
| SMART | 312 | 592 | 281 | 2.9E-44 | ||
| Pfam | 313 | 586 | 274 | 2.2E-52 | ||
| ProSitePatterns | 318 | 340 | 23 | - | ||
| Gene3D | 384 | 601 | 218 | 6.4E-60 | – | |
| ProSitePatterns | 431 | 443 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi4g1v0157000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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