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LotjaGi4g1v0200000.1

Overview

Field Value
Gene ID LotjaGi4g1v0200000
Transcript ID LotjaGi4g1v0200000.1
Lotus japonicus genome version Gifu v1.2
Description Dual specificity protein phosphatase; TAIR: AT2G35680.1 Phosphotyrosine protein phosphatases superfamily protein; Swiss-Prot: sp|Q9ZQP1|DSP8_ARATH Putative dual specificity protein phosphatase DSP8; TrEMBL-Plants: tr|I1K0T6|I1K0T6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0200000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:46323441..46328052) extracted from Lotus japonicus Gifu genome v1.2.

ACTTAAACTTGCCTCTCCTCTTTTTCATTTTTTTGTGTGCGATCTAATCCATTATCAGAGTTTGTTGAGCGAAACTTGCG ATTTTTCTGATTCAACCAAAATCAATCTAGGGTTAGGGATTCCAATTTCAATTTCAAAATTCCTCTCTTCGATTCTTTCC TCTCTCTCTCATCCATCTTCCTCGCTCCTCGATCAACCCTTTCTTCAAACCATGGTCTTATTTTCTCGGGAAAATTCCGC TTACAATTTTCTCGTCCAAGCTCTTTTCCTATCTATCATCCTTCGTCCAAATTGTTACCGAATTCCGATTTCATAGTTTC CACGATCGATTCGGTGATCCGCAAATTGCAATTTAAATTTTTTTGCGTTTGTTTTGGTGGTTGTAATAGAGATACGTGAG GGGTGTGAAGAAGTGTAGTTCATACGTATCGTTAACTTTGTGCATACTGCATAGATAACTCTTTGTTAATTAGGATTTTT TTTTTGTAAAGGTGTAGATATTATTACTGTAATTATTTTTGTGATTTGGAAGTGAGTTATGCATATAGAGGAATTGAAGG TAGGTGAGGTGGGAGAAGGTGGAGAGGAAGGGAGATCGAGCTTCGTCGGCTCGGATGCGAAAAGGGTTCTGGTTGGAGCA GGGGCTCGCGTGCTATTCTATCCTACGCTGTTTTATAATGTCGTTAGGAATAAGATTCAGGCTGAGTTTCGGTGGTGGGA TAAGGTTGATGAGGTATGGTTTCTTATGCATCATATTTTTTTGTTGTTGCAGCTTTTTAGTTTGTGGATCAAGTTGATGC ATGATTATTGCAGTTGTTCTCTTGTGTCAGTGCTTTGATGGTGGTTTAATTTGTATTTGATTTGTTCTGATTACTATTAC TAATGTATGTATTTGATTTCATGATGTTGTTGATGCTTTCCTAAGCTAAGGGCTTCTTTTCATTTTCTAAATAGTAAGTC ATTGTTGACCAAGGAATGGCAAAAGGAAGAATTTGAGATGAAAGTATTTGCAAATCCCATTATAGATGAACTCATTTTAG ATGATATGAAATCTTTTGGGTTTAAATTTTAAATTCCAAACTCTTAAGTAAAATGCTCAAAGAAATCGCAATGCCAATTT ACACCATCCAATGCATCAGCTGTCTTTAAAATTTATGGTGATAATGCTTTCTGGTTCAAAAAATTCACTTATTTCTTACT TTTCTGCATTTTATTATTAATAATAACTTTGCTTTGCATGATCTTCTAATAGTTGACTTTTTTATTTGTTAATCAACAAG GTACACTTTCCTAATTCATTTATGAAAGATTGTTTACATTTCATATCTATTGTCCTTCCATGGTGTATTTCTACTCTAGA TAACATTGTCATTTATGCAGTAGGGATGTTGTGCAATAATTAGATAGATATGCTCTTATAGTGTTTATATGTCTCTTTTT TTTCTTTTAGCTGACATGACATGTTTTACCTGGTTGTGTTTGAAATTTGTATTCTGTTTGGGAAACTAGGCTTCTCCTAA ATCTGATACACTTAATTTTCAGTTCATATTGTTAGGTGCTGTTCCATTTCCTATTGATGTTCCCCGCTTGAAGGAGCTTG GTGTTCGCGGTGTCATCACATTGAATGAGCCATATGAGACTTTGGTTCCTACCGCATTATATCATGTTAGTCTTCTACAT TTCATGTTTTGTTTCATCTGAGATTTGATTTATATTATTTTATACCATCTGTTTTTTAGCTGAATACTTTGAATGCTAGA TTGTTATTTAAGCATAATGTTGAATTATAATTTTTATTGTGAGTTATAGGGTTTTATGCCCCGTCTGTATTTGAAGAGAG TTGCTTTGCTTGTGATGACTGTTGAGTGTCTGTTAATCTTGTTTTCCTCTCATATAATTATGACTAAGTTGCTTTTGTGG ATCTGCAAGTTCCTGAAAATATTTAATGTTTGAGTTTGAAAAGAAACTCAATGTGATCAGATGAAGAGCATTAAAATGGT TGATGAGTCTAATAAAGTCCAATGCTGCTCACGCGTCAGAAGACCAAGAAATTGTTACTATTGACTATACCCTAACATTT TGTTTTTTAATGCTTACTTGTATGTTTATGCTGTGTAAGTTTATGGACTTGGTTTTTATAATTAGATTTGAAACTTTTGT GATTGGGATTTTTTTTCATTACTGAAATATGAGTATTGTGAATTATTCTCTCTCTCTCTCTCCTCCCCCTACTGGTATGC CCATGTGCTTCAAAATGTGACAGAACAGTCCATGTTACGCAGATGCTGTTGCCTGTTTTTATTCTACTGGGTTACTGTAG CTTCTTTGGTATTTTCATCACATTAAATTTCTTTTATATGTTCAATTCTTATTTTCTTGTTAAAATTTGGCAGGCTCATG GAATTGATCATCTGGTGATTCCCACTAGAGATTACTGTTTTGCTCCATCATTGCATGACCTATGCTGTGCTGTGGACTTC ATACATGGTGAGTAGTTGAGTACTATGCTAGTTTGTCGACAATAATGATATCCAACTTCTTAGTGGCATCTTTAAGTTTC TTTATGCGTTGCAAAAGTGGCTATTGATATTTAAAATTTTAGAAGTTTTCTTTCTATGATTATGTCTGTATTTGTCTTCT CTTTTATCACCCTCAAAAAGGAAATAAATTCTTAAGAAAACATCTGGAACAAGTTTGTACTGAAGAAGTTATTGAATTCA TCTACATGTATGCTTGAAACAACTGTGTTCCTTGTTGTAATTTAGTTATAATACTCGTGTATTCATTTTGATTTTTCCCC TATCCGGCTCTTTTGTTGAAGGAAATGCATTGTCTGGACGAACTACATATGTCCACTGCAAAGCTGGACGGGGTCGCAGC ACAACTGTTGTTATTTGTTATCTGGTTTGTACCACAACTTAAGAGGGTATAAAAAATATTACTGAAAAGGAGAAGAGGCT GTAGTGTAATTGGCTAATTGTTCTTACATTTTGAGCTTTTCGGTGTAGGTTCATTACAAACAGATGACACCTGATGCTGC GTATGAATATCTGAAGTCAATTCGGCCTAGGGTGCTTTTGGCTTCCGCTCAGTGGCAAGTATGTGTGAAACTTGTGTTTT TGGTTATTGTTATTATTCATTGAAGTTTCACAGTCACTGCAGCTCCAATTTACCCATTATCATGTTTTTGGGTAAGCTGG TCCCTGACAAGATGAAGTGGAAATTTTATTAATGTAATTTAAACCTCTTCATTTTGTCAGTGCCAGTGCATTAACTTTAA AAGTGGAAGTCCATCAAATTTATTCTTTCTTGATCCATTTTTCCGACCAAATTTTTCTTTTGATTTGTGTTGTGTTGAAA TTTCAGGCTGTTCAGGAATACTACTACCACCTTATGGTGAGGAGGGCTGTTGGATTTGCTCCTACAGCCGATCTATTCAT TAAGGCTTCTAAGGTTGCAGCCGCTTCACGAGAGCTTGTGACATTTGATGACAGCTCTGTAGTTGTGGTAACAGAACATG ATCTTGAAGGATACAACCCAAGCTGTCAATCAGGAACCATGCCAAGTGAAATATGGGCAGATTTAAGTGTTGTTTACCGT GTACGTGTTGCTGGACAGGCAGCATTGGCAAGAATATCGTGCCTTTGGCTGCGATACGGTTCTAACCAGAAGATTTCTGC GGAGAACCTGAGCGGGGAAAGCAGTTGCTCAGTCAGAACTAATCACTTGGGAGCAATTAGTGTTGATATCCATGTCTACT GAAAAAAAAAAGCCTGGGTTGCCTACTAAGTTCCCACCAAGTTTGACATGTTTTCCATGTTCTGCACAAAAATAATTCAT GCTTGGCTGGGCTTTATATGAATAGCTTACCTCTGTATATTCTGCTACTTCCCTCATTTGAATTCAAATGATGAGTGTGT CATACGGGTTAATCAATTGATGTGCTTCATCTATATATATTTTGCTGATGGTTACTAACTTCTGGTGTCTATGGATATTA GTTGAGTTAACTTGAGTGTTAACATCCACTTTTTTCCCTTGGCGTGCTGGCACCAATGCATATTTAAACATACGTTACTA GGTTTGTTGGAGTAGATATATCAAATTGGGTGAAGTATTTCTGCTGCTAAGCTCAGTTTTCCATGGATGCAATGCTGAAG TCTGCTGCCTAGTAAATGAGGGAGAATTGTTGAATGTTGAGGTTAATTATTGCTATGAATGGTGATTTATTTGGTTTAAC CACTAACTCTAACCCCTGGCGCAGTCATTTGGATTGAAATTTGGCTGGCCATAACGCATGCAGTGGAGTCCCAATTAAAA TTATGTATTTTCTTCGTAATCAATACTGTTGTCCTTGCTGGTAATTAGGTTTGTTGAGCTGTCTATTACTTTATACTCTT GCAAGTTTTCGGTGAACCGCATGAGCTGGTTTTAGTTGTAGTTTTTGCATTACTATGATGCATCGCGTGCCTTTCAAGAG CGTGGTAACAAATTTTTATTTTATTTTTGAAAATGCGTGGTAACAAATTAAAAGCATCATTGTACATTTATCAGTTTATC ACTATACTTGTTCGCTAAACTGCTTATGATAAAGCATCATTATACAACTAGG
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0200000.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGCATATAGAGGAATTGAAGGTAGGTGAGGTGGGAGAAGGTGGAGAGGAAGGGAGATCGAGCTTCGTCGGCTCGGATGC GAAAAGGGTTCTGGTTGGAGCAGGGGCTCGCGTGCTATTCTATCCTACGCTGTTTTATAATGTCGTTAGGAATAAGATTC AGGCTGAGTTTCGGTGGTGGGATAAGGTTGATGAGTTCATATTGTTAGGTGCTGTTCCATTTCCTATTGATGTTCCCCGC TTGAAGGAGCTTGGTGTTCGCGGTGTCATCACATTGAATGAGCCATATGAGACTTTGGTTCCTACCGCATTATATCATGC TCATGGAATTGATCATCTGGTGATTCCCACTAGAGATTACTGTTTTGCTCCATCATTGCATGACCTATGCTGTGCTGTGG ACTTCATACATGGAAATGCATTGTCTGGACGAACTACATATGTCCACTGCAAAGCTGGACGGGGTCGCAGCACAACTGTT GTTATTTGTTATCTGGTTCATTACAAACAGATGACACCTGATGCTGCGTATGAATATCTGAAGTCAATTCGGCCTAGGGT GCTTTTGGCTTCCGCTCAGTGGCAAGCTGTTCAGGAATACTACTACCACCTTATGGTGAGGAGGGCTGTTGGATTTGCTC CTACAGCCGATCTATTCATTAAGGCTTCTAAGGTTGCAGCCGCTTCACGAGAGCTTGTGACATTTGATGACAGCTCTGTA GTTGTGGTAACAGAACATGATCTTGAAGGATACAACCCAAGCTGTCAATCAGGAACCATGCCAAGTGAAATATGGGCAGA TTTAAGTGTTGTTTACCGTGTACGTGTTGCTGGACAGGCAGCATTGGCAAGAATATCGTGCCTTTGGCTGCGATACGGTT CTAACCAGAAGATTTCTGCGGAGAACCTGAGCGGGGAAAGCAGTTGCTCAGTCAGAACTAATCACTTGGGAGCAATTAGT GTTGATATCCATGTCTACTGA
Download CDS Sequence

Protein sequence (LotjaGi4g1v0200000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MHIEELKVGEVGEGGEEGRSSFVGSDAKRVLVGAGARVLFYPTLFYNVVRNKIQAEFRWWDKVDEFILLGAVPFPIDVPR LKELGVRGVITLNEPYETLVPTALYHAHGIDHLVIPTRDYCFAPSLHDLCCAVDFIHGNALSGRTTYVHCKAGRGRSTTV VICYLVHYKQMTPDAAYEYLKSIRPRVLLASAQWQAVQEYYYHLMVRRAVGFAPTADLFIKASKVAAASRELVTFDDSSV VVVTEHDLEGYNPSCQSGTMPSEIWADLSVVYRVRVAGQAALARISCLWLRYGSNQKISAENLSGESSCSVRTNHLGAIS VDIHVY
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR46274
1 326 326 7.0E-163 –
PANTHER
PTHR46274:SF9
1 326 326 7.0E-163 –
SUPERFAMILY
SSF52799
51 204 154 1.07E-35
IPR029021
Gene3D
G3DSA:3.90.190.10
59 209 151 1.3E-39
IPR029021
CDD
cd14524
59 201 143 2.40438E-68 –
ProSiteProfiles
PS50054
62 187 126 18.186
IPR020422
SMART
SM00195
62 203 142 1.0E-7
IPR020422
Pfam
PF00782
84 201 118 2.7E-17
IPR000340
ProSiteProfiles
PS50056
127 195 69 13.224
IPR000387
ProSitePatterns
PS00383
148 158 11 -
IPR016130

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004725
Molecular function Protein tyrosine phosphatase activity Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate.
Subterm of
GO:0006470
Biological process Protein dephosphorylation The process of removing one or more phosphoric residues from a protein.
Subterm of
GO:0008138
Molecular function Protein tyrosine/serine/threonine phosphatase activity Catalysis of the reactions: protein serine + H2O = protein serine + phosphate; protein threonine phosphate + H2O = protein threonine + phosphate; and protein tyrosine phosphate + H2O = protein tyrosine + phosphate.
Subterm of
GO:0016311
Biological process Dephosphorylation The process of removing one or more phosphoric (ester or anhydride) residues from a molecule.
Subterm of
GO:0016791
Molecular function Phosphatase activity Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0200000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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