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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0217500 |
| Transcript ID | LotjaGi4g1v0217500.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WD-repeat protein, putative; TAIR: AT4G22910.1 FIZZY-related 2; Swiss-Prot: sp|Q8L3Z8|FZR2_ARATH Protein FIZZY-RELATED 2; TrEMBL-Plants: tr|A0A024FSI1|A0A024FSI1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0217500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:51109086..51114780) extracted from Lotus japonicus Gifu genome v1.2.
CCGGAATCCACCACCACCTCCCTCCTCCTCCGCCGACACTCCTCCTCCTCCACCTTCTTCCTCCTCCTCCACCTCCTCCT CCGCGGAGAGTCTCCGCCACGTGGAACGCATGATCAACTCCAACCACTACGCATCTCCTTCCAGAACAATCTACTCCGAC AGGTTCATTCCCAGCAGATCTGCCTCCAAATTCGCCTTGTTTGACATCTCCACTCCCCCGGAGGGCCGCGACGACACCTC CAGCGCCTACACCACTCTCCTCCGCACCGCTTTGTTCGGTCCCGATGCCGCCGGCGTCGCTCCTCCTGTCACGCCGGACA AGAGGTCGTCTCCGTCGATGTCCTTGCCTAGCCGGAATATTTTCCGGTACAAGATGGAGACTCGCCAGTCCATGCACTCG CTTTCCCCGTTCATGAGCGACGATGCGGTTCCCGGCGTGAATCCGAGCCCCGTCAAGACTCCGAGGAAGGTTCCGCGATC TCCTTATAAGGTGAATTGAATTTTCGTGTTCTTGGTTCTTTCTGTTCTATAATGTATCGATTTAGGTTTCTGAGATTTGT GGTGTGTTTGTTGCATTGATAGGTTCTGGATGCACCTGCATTGCAAGACGATTTCTATCTGAATCTCGTGGATTGGTCTT CGCACAATGTGTTGGCTGTTGGTTTGGGTAACTGTGTTTATCTCTGGAATGCTTGTAGTAGCAAGGTGGGTTATTGGATT TGATTTAAGAACAGTAATGCAGGTTGTAAACCTTCAATTTTTGTGTGATTGTGAGCTATCTGGTGTCCAATTATGCAAAT TGAAACTTGAAAGATTCTTCTTTTTATTTTCTTTTACCTTTTTTGTGATTCATTCTAACTTGATATGCTGGGGTGCAGGT AACTAAATTATGTGACTTGGGGATTGACGACTGCGTTTGTTCAGTTGGCTGGGCTCAACGCGGTACACATCTTGCTGTTG GAACTAGCAATGGCAAAGTTCAGGTAGGAGTTTATTAGTTCTTGTTGTATGACTTTCTAAAGGGTGTATTTGATGAGTAT TCATGGTAACAGGAGGGCTCAATACTTTTCGATTACTCTGCTTTGGTTTTCTTCCACTTAGTTTTCTTTCCTTGTTAGGT GTACTTTGCTCCCATATACTTAATATTCTATTTCTTAAATAAGCAAAGACATGATTTTGTGGTCCTTAAGGAAGGACTCT GCATAGGAATGACAATAAAATGTGATCAGAGTTTTTAATAGTGGTGGGGATTGTGGTTGCATTGCGGAATTGTGGACAAA TGCGGGTTAATGCAGCCGCAATTGCGATTGTGATGCCGTCGCGGGACTCCGAAGACCTTTATGTTGCGCCGCAGTAGCCG TTGCGGAAAGCAATTTTAAATCCTGCGTGTGATATCCTGCATCCTAGACGAGGCACTATAAGTCTATAACCGTTGGGCAT ACTAGATGTGTTAGATTAGTGTCTTTTACTGATCCTGAAACCCCTATTTATTTGGTAAGGCACCAAAAATTGCAAATAGA AAGGGGAGCATTGGGGTAAAGTATAAAGATGATGATACAGTGAGTCCTTCGTTTAGGTTGGAGAGGAAAAACATGGCAAG GAATTAATAAGAACTTGCTAGATTAGATTAGAATCGATGGCGCTACTCTGGGTGATCAATGAGTTGCTAGTTATCCTGGA GGCCATCTGAGCCTTGCAAGGAGGCAGGGAGCTTCCTGTCCTGTCTCTTAGCTTTAAGAAGGAAAACATGTCAAATCGCA AGCCACTCACAGATTCGTCTGGATTATGCAGGATGGAATGGAAATGAATCAAATGATATTAATAGTCATTAATGAATGCA ATGCAATGTCAAATATGATTTTTTCCTTCATAAGATAGTTCTTAGGAAAATATTAAGTGTAGATATGTTTGTCTGGGATT AGGTAGATAAAAATTGAAGATTTTCTCTATAATTTTACAGTTTTAACCTTTATTATTATTATTATTATTATTATTATTAT TATTATTATTATTATTATTATTGATGGTGTATGAAATTGGAAGTTTGGAAAAATTTAGTAATATGTTTTCTGTTCCCTTT TTTCACTCACTTTTGGAGACAAGAGGTTTATTGAAAATACTTTCTTGGTGAGCACATCATTGCCTTTGCCTTCTTTTTAT GAAGCACAGACTGTTAAAAACCTTCTAAATATGTTTTAACGCATATTCAACATATTCGGGTATATTTAATGCATTTAATG ATGTTGTCATGTTTGCGTATGCAATTATATATATTGATCATACGATATAATTTTTAATAATATGTTTATGCCGTGTCATA TCCTTGCTTAGAATCTTGTCGTGTAGCTGTGTTCATGATGTGTTTTGTCGTGATTGTGTGCCTATTGTCGATGTCTGTGC GACATCACTATTTATTTCCTTTCTTGATCATCAGGGTTGTGTTACTGTAAACTTGGGTTAATGGTGTGTAGTATACTTGT GAACAAATCAATCATTCAATTTTATGATGTTTACACATTTATAATTTTAATTTTTGTTTTGAATGATAGATATGTTGCTA TCTATACGGTTCACCAAGCTATTTTATTTTCAACCCTTCTTTGATCATAATACATCAAACTTGGGATCAGATAGGTCCTT TTCCTTGTTTTCCATTTTATTTGGTTTTGCATCCATTTTGCTCAAAGTATGACAAGGCCATGATACTTTTTGATGTTCCA CCAGGCCACGAGCTACTTACTAAAATTGGACCTTACTGTCTAATCTTAGGTTGTGGTTGACATCTTGAGTTGGCATAGAT GTAATTGTACAAAGGTTGGATTGGGCTATCTGTGTAATTATGAGTCAATCGTTGAATAAATGAATGCAACAAAAAGTAAA AATACAGATTACCCACCCCTAAAAGTGACGGTCATTAAGAGGATGAGCCTCCAATATAAAAGTCAGTTATGTCTTTCACA CCCGTTCCATATGGGACTCATGTTCCTATTTCAACCACATTGGGTTAAAAAGAGCGGTCAATAGTTTGATGCTTATGTAT GTGGACTAGAACCCACTCTTAAAACCCAGGATGACAAGAGGGGGGAGAATTCTGGGGAATTCTGTTTCACATCCAGCCAA TGTGGAACTCATGATTTTGTTAGTCAAAATGCATATTAAATATTGCGCTTTCAGATACGGATATATTCAATACGGTCTTC CATTATTGAAATATAACTTAAACTCTGGTAGAACTTGTGCTAAAACCCGGAACTCGCTAGAGGAAAAGCTAGCTTATAGT TTATAAGTGATTATGCTCTCTACCCTGATATCCCACTGTGTTACCAAACATGCTATTAATGAAAGTAGGTCTAAGCAACT TAAGCTTCAGATTTGTTAAATTACATTTGTTTGATAGTTATCTATTGATATATTCCTTATGCATTCATATAGAAAGTTAA CTTTGCTTGCTTGTTTGGATCCTAATATCTGATCAGTATTCCATGCCCATTTTCCCTCAATAGTGTGTAGAGGCTTACTC TGTTTTTCTTTTGTGGCATCAAAAGCTGTTTCCCCCCTCATTGCATCCCTGGAACTTGTTAATTTCACTTAATTTTTTCT TTTACTAGCCTTCGTGGTCTCTGTTTCTAAATAAGTTAACCGCACCTGACTCTAACTGCTATCCATTTAGATTTGGGATG CATCTCGATGCAAGAAGATAAGATCCATGGAGGGTCATCGACTACGCGTTGGGGCCTTGGCCTGGAGTTCATCTCTTTTG TCTTCTGGTGGCCGGGATAAGAATATTTATCAACGAGATATACGTGCACAAGAAGATTATGTCAGTAAACTGTCAGGGCA CAAATCAGAGGTCAGACTTGTTTTTATTTCCTCTAGCTTCATCTGGTCAAGCCAATCTACTGTAACACAATTTTGATTCT TTTTTTCTTTTCCTTATTTTTTCAAAGGTTTGTGGACTGAAGTGGTCATATGATAACCGTGAGTTGGCATCTGGAGGAAA TGACAACAGAGTACGCAATTGCAAAGTTTATCATTTTTCTGAAATATCCAACTACACTGTATTCTTTACCTCTCCTGCAT TGGTACTAATGATTTATTTCATATCTCTGCAGTTGTTTGTTTGGAATCAACACTCAACCCAACCTGTTCTGAAGTATTGT GAGCATACAGCAGCTGTTAAAGCTATTGCATGGTCTCCTCATCTTCATGGACTTCTTGCATCTGGGGGTGGAACAGCAGA TCGATGTATTCGCTTTTGGAATACAACCACAAACTCGCACTTAAGCTGTATGGACACTGGAAGTCAGGTAAAAGTTCTTA TCCATAACCTGTTTATACTTCCATATCAAATGCGCTACATTTTAATATTTGCTGCAATTCAATGCTGGTTATTGATTGGC ACTACAAAGTTGATTTGTTGCTGGAGAAAATGCATGTTCCCTTTTTAGAAGGGTTATTTCAACAGCTTGTATAAAGCATG AAAGAACAACAAACTGCTGAACCAAGATCCACATAAAGGAAATGAAAAGAATAACACGGCGCTTGAAAAATAATTTAAAA TACAATGTTGAAAAAAATAAAGAGGTTGAAGAAAGGATTAGAAAAGGGAATCCGAGAGTATTGGACCTCATGATGGACAA GCTCGGTCTGTGAATTTTGAAGTCATCATAGTTCTTTTGATAGATTACATTTGATGCTCCTAGCCAAACTGTTATTCTTT ACTTGTTGAAAGATAATATGTGATGCTTCCATACAGAACTGCTTTTCTCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTC TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCCTCCCCTCTTTCTTTTTGGCTCGGAGGGGTAGGTAGTTGATTAAT CGGCAGTTCGGTAATATGGATTTTACTATGAGATGTTTATTTATTTCTGCATATATGTTATGCCCAGATTAACATTCACT ATTTGCTACGGATCAAATACAAAAGATTCTTTATTAAGTTTATCAATTTAAGAGTCTGTGGCATTTGCCTTCACATATGG AGAGAAGGATAAAAGCCTTTTCTGGTCCAAAAAATGATGTTCAATTCAACGTTATATTTGGCAGGTATGCAACCTTGTCT GGTCCAAAAATGTCAATGAACTAGTAAGCACACATGGCTACTCCCAGAATCAAATAATTGTTTGGAGATACCCCACCATG TCAAAGGTACGCACTATTTTTGTGATAAAGTGTATGTTTTCTATGTTTGCTTGAGCAAGTTTTTTACCATCTTTCTTTGT TTTATGATGCAGTTGGCCACTCTTACAGGCCATACGTATAGAGTTCTTTATCTTGCCATCTCTCCAGATGGGCAGGTACT TCATTTCTCCATTCACCTTTTCCTCTTTCCAGATTACCAAGTATCTATGACTATGACTAAGAAAATGTTTTTCTGTATTT TAATATTTATCATCTATGCAATATTTCTGGTTGTGATGAGTCTTATTGTTTCAGACTATTGTAACTGGAGCTGGAGATGA AACACTTAGGTTCTGGAATGTATTCCCTTCCCCAAAATCACAGGTAAATTATTAATTAAAATGGAGCACAAATTCATCAC ATCCATAACCCTGTTCTGTCTATCTACATTTATGAATATTTTAGTTTCTCGTACTCGGAACTGTCTCTATTACCGTAATC ATGACTGGAGATTAA
CDS sequence (LotjaGi4g1v0217500.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATCAACTCCAACCACTACGCATCTCCTTCCAGAACAATCTACTCCGACAGGTTCATTCCCAGCAGATCTGCCTCCAA ATTCGCCTTGTTTGACATCTCCACTCCCCCGGAGGGCCGCGACGACACCTCCAGCGCCTACACCACTCTCCTCCGCACCG CTTTGTTCGGTCCCGATGCCGCCGGCGTCGCTCCTCCTGTCACGCCGGACAAGAGGTCGTCTCCGTCGATGTCCTTGCCT AGCCGGAATATTTTCCGGTACAAGATGGAGACTCGCCAGTCCATGCACTCGCTTTCCCCGTTCATGAGCGACGATGCGGT TCCCGGCGTGAATCCGAGCCCCGTCAAGACTCCGAGGAAGGTTCCGCGATCTCCTTATAAGGTTCTGGATGCACCTGCAT TGCAAGACGATTTCTATCTGAATCTCGTGGATTGGTCTTCGCACAATGTGTTGGCTGTTGGTTTGGGTAACTGTGTTTAT CTCTGGAATGCTTGTAGTAGCAAGGTAACTAAATTATGTGACTTGGGGATTGACGACTGCGTTTGTTCAGTTGGCTGGGC TCAACGCGGTACACATCTTGCTGTTGGAACTAGCAATGGCAAAGTTCAGATTTGGGATGCATCTCGATGCAAGAAGATAA GATCCATGGAGGGTCATCGACTACGCGTTGGGGCCTTGGCCTGGAGTTCATCTCTTTTGTCTTCTGGTGGCCGGGATAAG AATATTTATCAACGAGATATACGTGCACAAGAAGATTATGTCAGTAAACTGTCAGGGCACAAATCAGAGGTTTGTGGACT GAAGTGGTCATATGATAACCGTGAGTTGGCATCTGGAGGAAATGACAACAGATTGTTTGTTTGGAATCAACACTCAACCC AACCTGTTCTGAAGTATTGTGAGCATACAGCAGCTGTTAAAGCTATTGCATGGTCTCCTCATCTTCATGGACTTCTTGCA TCTGGGGGTGGAACAGCAGATCGATGTATTCGCTTTTGGAATACAACCACAAACTCGCACTTAAGCTGTATGGACACTGG AAGTCAGGTATGCAACCTTGTCTGGTCCAAAAATGTCAATGAACTAGTAAGCACACATGGCTACTCCCAGAATCAAATAA TTGTTTGGAGATACCCCACCATGTCAAAGTTGGCCACTCTTACAGGCCATACGTATAGAGTTCTTTATCTTGCCATCTCT CCAGATGGGCAGACTATTGTAACTGGAGCTGGAGATGAAACACTTAGGTTCTGGAATGTATTCCCTTCCCCAAAATCACA GTTTCTCGTACTCGGAACTGTCTCTATTACCGTAATCATGACTGGAGATTAA
Protein sequence (LotjaGi4g1v0217500.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MINSNHYASPSRTIYSDRFIPSRSASKFALFDISTPPEGRDDTSSAYTTLLRTALFGPDAAGVAPPVTPDKRSSPSMSLP SRNIFRYKMETRQSMHSLSPFMSDDAVPGVNPSPVKTPRKVPRSPYKVLDAPALQDDFYLNLVDWSSHNVLAVGLGNCVY LWNACSSKVTKLCDLGIDDCVCSVGWAQRGTHLAVGTSNGKVQIWDASRCKKIRSMEGHRLRVGALAWSSSLLSSGGRDK NIYQRDIRAQEDYVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLA SGGGTADRCIRFWNTTTNSHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSKLATLTGHTYRVLYLAIS PDGQTIVTGAGDETLRFWNVFPSPKSQFLVLGTVSITVIMTGD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 428 | 428 | 2.8E-246 | – | |
| PANTHER | 1 | 428 | 428 | 2.8E-246 | ||
| Gene3D | 115 | 424 | 310 | 1.9E-120 | ||
| SMART | 122 | 163 | 42 | 140.0 | ||
| SUPERFAMILY | 132 | 420 | 289 | 1.83E-59 | ||
| SMART | 166 | 206 | 41 | 0.043 | ||
| ProSiteProfiles | 174 | 428 | 255 | 35.014 | ||
| Pfam | 176 | 230 | 55 | 1.1E-5 | ||
| ProSiteProfiles | 181 | 215 | 35 | 9.071 | ||
| SMART | 209 | 246 | 38 | 0.12 | ||
| SMART | 250 | 289 | 40 | 4.8E-7 | ||
| Pfam | 254 | 289 | 36 | 1.4E-5 | ||
| ProSiteProfiles | 257 | 298 | 42 | 13.55 | ||
| SMART | 292 | 334 | 43 | 0.0019 | ||
| Pfam | 294 | 334 | 41 | 0.016 | ||
| ProSitePatterns | 321 | 335 | 15 | - | ||
| SMART | 380 | 419 | 40 | 1.7E-8 | ||
| Pfam | 383 | 419 | 37 | 4.9E-5 | ||
| ProSiteProfiles | 387 | 420 | 34 | 14.418 | ||
| ProSitePatterns | 406 | 420 | 15 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | Anaphase-promoting complex binding | Interacting selectively and non-covalently with an anaphase-promoting complex. A ubiquitin ligase complex that degrades mitotic cyclins and anaphase inhibitory protein, thereby triggering sister chromatid separation and exit from mitosis. | ||
| Molecular function | Ubiquitin-protein transferase activator activity | Increases the activity of a ubiquitin-protein transferase, an enzyme that catalyzes the covalent attachment of ubiquitin to lysine in a substrate protein. | ||
| Biological process | Positive regulation of ubiquitin protein ligase activity | Any process that activates or increases the frequency, rate or extent of ubiquitin protein ligase activity. |
Expression pattern of LotjaGi4g1v0217500.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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