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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0254500 |
| Transcript ID | LotjaGi4g1v0254500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone protein DnaJ; TAIR: AT1G74250.1 DNAJ heat shock N-terminal domain-containing protein; Swiss-Prot: sp|Q9C911|JJJ1_ARATH DNAJ protein JJJ1 homolog; TrEMBL-Plants: tr|A0A1J7HZV7|A0A1J7HZV7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0254500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:60865368..60868615) extracted from Lotus japonicus Gifu genome v1.2.
GAAAGCTCAAAATACGTTGTCCTTTACCTGGTGTTGTCATCAACTTCAAAATCCCTCTTTAAAGGGAACACGCAAAACCA AAACCCTAATTCTGTGCAGAACCTCCAATGGCGTCGTCGTCGGCCAAGCGATGCCACTACGAGGTTCTCGGCCTCCCCCG TGATTGCACCCCCGACGAGATCCGATCAGCCTACCGCCGCCTCGCCCTTCAGCGCCACCCTGACAAGCTCGTCCAAACCG GCATCTCCCAATCCGAAGCCACCGCACAGTTCCAGGAGCTTCAACAAGCCTATGAGGTCCTCTCCGACCCCAAAGAACGC TCCTTCTACGACTCCCACCGTTCGCAAATCCTCTTCGCCGACCCCAACTCCTCCTCCAACTCCCTCGTCCCTGACCTCTT CTCGTTTTTCTCCAATTCCGTCTTCTCCGGCTACTCCGATTCCGGCAAGGGCTTCTACAAGGTCTACTCCGGCGTCTTCG ACAAAATCCACGCTAATGAGGTTAATTTCGCCAAGAAGATGGGTTTACCTGTTCCTCAGGCTCCACTCATGGGGAATTTG GATAGCCCCTATGCTCAGGTCACTGCGTTTTACGGTTACTGGATGGGGTTTTCGTCGGTGATGGACTTTTGCTGGGCGGA TGAGTATGATGTGATGGCTGGTCCGAACCGGCGGTCGCGGCGGTTGATGGAGGAGGAGAATAATAAGGTGAGGAGGAAGG CGAAGAAGGAGTACAATGAGACGGTGAGGAGGTTGGCTGATTTTGCGAAGAAGAGGGATAAGAGGGTGATTGATATGAAG GTGAAGAAGGTTGCTGAGATGGAGAAGAAGAAAGAGGAGGAGAGGGAGAAGAAGAAGAGGTTGGAGAAGGAGAAGAAGGA GAGGGCTATGGCTTATGAGGAGCCTGAGTGGGCTAAGGTTGAGGAGGGGGAAGAGGCGAGCTGGTTTGAGGAGGTGGAGG AGGAGGAGGAGAAGAAGGATGAGAATGAGTTTTATTGTGTGCTTTGTGGGAAGAAGTTTAAGAGTGAGAAGCAATGGAAG AATCATGAGCAGTCCAAGAAGCATAAGGAGAAAGTTGCAGAGTTCAAGGATTCACTTGCCGATGAAGAGGATTTAGAAGC AGAGGTGGAAGGAGAAGAAGAAGATGTAGGAGCCGAGAACGGGAGACCGGAAAGTGAGGAGGGTGGAATTGAGGTGAATG ATGATCAATTGGAGGAGGTTGATGATTTGGAGGAGAGGATTAGAGATGGTCTTAATGTTGCAGAAGAGGAGACTAGAAAT GAGGTTAAACTGAATGATGATGGTGATGGTAACGATGATGATGATGATGATTTTGATGCCACACATTCAAAGGAGAGTGA AAAGGCTGATGTTTCAGTTGATTTTGATGATGATGAAAATGGTTTTCTTGAAGCAATGGTGGCGGGGCGCAAGAGCAAAA AACCCGGTGCTTCAACACAGAAGCCCAAGGCTTCAGTAACTCCATCTCAAACTGAGAATGAGAATGAGAATGTGGATGAA AATGAGAATGAGAATAAGAATGAGAATGATGGGGTTGGCTTTATGGAATATAACAACCAGAAGAGCACAAGAAAGAAGCG TCGAGCCAAGAAAGAGAAGGGTAGGGTGGATGAACCTCATGGGGCTGCTTTCAGTGCTAATTATGAGAATAGAAACAGTG ATGGAAATAATAATTCTTTTGCAGAAGAGTCTAGTTCCCAGTATTCTGTGGAAAATGAGGAAAATGGTAAAGAGAATGAG CAGGTAGGTAGAGATAAGAAGAGTTCAAATCAACCAGTTGACAAGAAAGGAACTTCCAAGGATGCGAAAACTAGAGCAAA AACTTCATCCAAAGGAAGAAAAGCAAAGGTAAGAACTTATGAACATACATGTTCTCCAATCCCTTTATCATATATGTCAT GGCTTTTGAGATATGCTGCTGCTTTGTTGTACTGTCTTTTGTTTTTGTAGTTTCCTTAAACTTGAATAACAACTAGTTAT GTTCTTCTAATATGCAGCTAGTTAAGATGAAATTATGTTATAGAAGTTTATGTAAGTGTTTGGGAGAGCTCATGCAATTA GCATATGACCTACATATAAGCTGTTTTGAGCTTATTTTCACAAGCTGCGCATATTAATTTATGAATAAGCGCTTATATTG TGCTTTCTTAAATGGACAACTATCCTGGTTTTTTCCTATTTCCATTATATTGTGCTTATTGCGCTTAGTTAAACTGTAGC CATGATAACGTTGATTGCTTCTTGTAGTCATGACTTACAATCTAGCAATTCGTTTTGCATTATGTTCTAATTATTGATTT TGTTTCTTAAATAAGGCATCAAAGAATCTTGACAATATTTGTGAGGCATGTGGAGAGGAGTTTGAGTCAAGGTAATTTGT GTGTCTTTTGTTTATCAAATAATGTTTTTTTTGTTTTCAGAATAAACTGTTTTATAACTTCATTTGGTTTGATCCACAGG AATAAATTACATAAGCATCTGGGCGATTCTGGACATGCCAGTATAAAAGGTCGATGAGAAAACAACAGTGGGAATTATCC ATTCTTCAACAGTGTAACCTTGAGTGATGTTTAAGTTCGAAATTTTGCCAGCTTCAATTATTAATCCATTCTTTAATTTT TAAGATAGTGTTTCGATAAGCCTCTGTAGAATTATTTATGCTACAGTTGAGAAAAATATGAATACATGATATATTTGCAC AAATTTTGATGGAAATTAGTCATTGTATTTCTGTCCATTTTGTATCAAAAACAAAAAATGTGTTGATTAAATAAAAAAGA TGTTCCATTTCTTCTATTGGAGTTCGTTCTGTTTCCAGGTTTTAACACTATTTTGAGAGTAAATCGAATGGTTGCCACCA TAATATGAAAGTTCTATAAAGTCACGGCCTACCTAGTGATGGTTCACTCAATGAGGGCGAGGGATTTTATCTCTTATCAT GTTAGGCAAAGAGGAGGGGATTAGAGGATTTCAGCTGTAATAATCCCTTCGCAATTTCTCCAAAGGATTTGCTCTTAAGC AAAGTGGTTGAGTAGACTTGATGACTTAGTAAAGGAACACCCCTGTCTCAGTCAGTGTCTGAGCTGTGGTCGTCATGTAA AGGTCGAGAAACAATGAATGAAGCAAGGTGGTCACAGGAAACAATGACGAGCCTTGAGCCTATAAATACAAGTGTGGTTA TTCATTTATTTACATTATATTCATTCTTTGACTTATGCTAAGACCTAG
CDS sequence (LotjaGi4g1v0254500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGTCGTCGTCGGCCAAGCGATGCCACTACGAGGTTCTCGGCCTCCCCCGTGATTGCACCCCCGACGAGATCCGATC AGCCTACCGCCGCCTCGCCCTTCAGCGCCACCCTGACAAGCTCGTCCAAACCGGCATCTCCCAATCCGAAGCCACCGCAC AGTTCCAGGAGCTTCAACAAGCCTATGAGGTCCTCTCCGACCCCAAAGAACGCTCCTTCTACGACTCCCACCGTTCGCAA ATCCTCTTCGCCGACCCCAACTCCTCCTCCAACTCCCTCGTCCCTGACCTCTTCTCGTTTTTCTCCAATTCCGTCTTCTC CGGCTACTCCGATTCCGGCAAGGGCTTCTACAAGGTCTACTCCGGCGTCTTCGACAAAATCCACGCTAATGAGGTTAATT TCGCCAAGAAGATGGGTTTACCTGTTCCTCAGGCTCCACTCATGGGGAATTTGGATAGCCCCTATGCTCAGGTCACTGCG TTTTACGGTTACTGGATGGGGTTTTCGTCGGTGATGGACTTTTGCTGGGCGGATGAGTATGATGTGATGGCTGGTCCGAA CCGGCGGTCGCGGCGGTTGATGGAGGAGGAGAATAATAAGGTGAGGAGGAAGGCGAAGAAGGAGTACAATGAGACGGTGA GGAGGTTGGCTGATTTTGCGAAGAAGAGGGATAAGAGGGTGATTGATATGAAGGTGAAGAAGGTTGCTGAGATGGAGAAG AAGAAAGAGGAGGAGAGGGAGAAGAAGAAGAGGTTGGAGAAGGAGAAGAAGGAGAGGGCTATGGCTTATGAGGAGCCTGA GTGGGCTAAGGTTGAGGAGGGGGAAGAGGCGAGCTGGTTTGAGGAGGTGGAGGAGGAGGAGGAGAAGAAGGATGAGAATG AGTTTTATTGTGTGCTTTGTGGGAAGAAGTTTAAGAGTGAGAAGCAATGGAAGAATCATGAGCAGTCCAAGAAGCATAAG GAGAAAGTTGCAGAGTTCAAGGATTCACTTGCCGATGAAGAGGATTTAGAAGCAGAGGTGGAAGGAGAAGAAGAAGATGT AGGAGCCGAGAACGGGAGACCGGAAAGTGAGGAGGGTGGAATTGAGGTGAATGATGATCAATTGGAGGAGGTTGATGATT TGGAGGAGAGGATTAGAGATGGTCTTAATGTTGCAGAAGAGGAGACTAGAAATGAGGTTAAACTGAATGATGATGGTGAT GGTAACGATGATGATGATGATGATTTTGATGCCACACATTCAAAGGAGAGTGAAAAGGCTGATGTTTCAGTTGATTTTGA TGATGATGAAAATGGTTTTCTTGAAGCAATGGTGGCGGGGCGCAAGAGCAAAAAACCCGGTGCTTCAACACAGAAGCCCA AGGCTTCAGTAACTCCATCTCAAACTGAGAATGAGAATGAGAATGTGGATGAAAATGAGAATGAGAATAAGAATGAGAAT GATGGGGTTGGCTTTATGGAATATAACAACCAGAAGAGCACAAGAAAGAAGCGTCGAGCCAAGAAAGAGAAGGGTAGGGT GGATGAACCTCATGGGGCTGCTTTCAGTGCTAATTATGAGAATAGAAACAGTGATGGAAATAATAATTCTTTTGCAGAAG AGTCTAGTTCCCAGTATTCTGTGGAAAATGAGGAAAATGGTAAAGAGAATGAGCAGGTAGGTAGAGATAAGAAGAGTTCA AATCAACCAGTTGACAAGAAAGGAACTTCCAAGGATGCGAAAACTAGAGCAAAAACTTCATCCAAAGGAAGAAAAGCAAA GGCATCAAAGAATCTTGACAATATTTGTGAGGCATGTGGAGAGGAGTTTGAGTCAAGGAATAAATTACATAAGCATCTGG GCGATTCTGGACATGCCAGTATAAAAGGTCGATGA
Protein sequence (LotjaGi4g1v0254500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASSSAKRCHYEVLGLPRDCTPDEIRSAYRRLALQRHPDKLVQTGISQSEATAQFQELQQAYEVLSDPKERSFYDSHRSQ ILFADPNSSSNSLVPDLFSFFSNSVFSGYSDSGKGFYKVYSGVFDKIHANEVNFAKKMGLPVPQAPLMGNLDSPYAQVTA FYGYWMGFSSVMDFCWADEYDVMAGPNRRSRRLMEEENNKVRRKAKKEYNETVRRLADFAKKRDKRVIDMKVKKVAEMEK KKEEEREKKKRLEKEKKERAMAYEEPEWAKVEEGEEASWFEEVEEEEEKKDENEFYCVLCGKKFKSEKQWKNHEQSKKHK EKVAEFKDSLADEEDLEAEVEGEEEDVGAENGRPESEEGGIEVNDDQLEEVDDLEERIRDGLNVAEEETRNEVKLNDDGD GNDDDDDDFDATHSKESEKADVSVDFDDDENGFLEAMVAGRKSKKPGASTQKPKASVTPSQTENENENVDENENENKNEN DGVGFMEYNNQKSTRKKRRAKKEKGRVDEPHGAAFSANYENRNSDGNNNSFAEESSSQYSVENEENGKENEQVGRDKKSS NQPVDKKGTSKDAKTRAKTSSKGRKAKASKNLDNICEACGEEFESRNKLHKHLGDSGHASIKGR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 88 | 88 | 6.1E-25 | ||
| PANTHER | 3 | 624 | 622 | 3.6E-245 | – | |
| SUPERFAMILY | 5 | 107 | 103 | 7.85E-24 | ||
| SMART | 8 | 70 | 63 | 8.4E-25 | ||
| CDD | 9 | 67 | 59 | 3.17118E-20 | ||
| ProSiteProfiles | 9 | 78 | 70 | 20.083 | ||
| Pfam | 10 | 75 | 66 | 1.4E-21 | ||
| PRINTS | 11 | 29 | 19 | 4.6E-15 | ||
| PRINTS | 29 | 44 | 16 | 4.6E-15 | ||
| PRINTS | 50 | 70 | 21 | 4.6E-15 | ||
| ProSitePatterns | 55 | 74 | 20 | - | ||
| Coils | 191 | 222 | 32 | - | – | |
| Coils | 228 | 265 | 38 | - | – | |
| MobiDBLite | 238 | 257 | 20 | - | – | |
| Gene3D | 279 | 328 | 50 | 1.1E-8 | – | |
| SUPERFAMILY | 282 | 337 | 56 | 1.19E-14 | ||
| SMART | 292 | 326 | 35 | 9.1E-6 | ||
| ProSiteProfiles | 295 | 324 | 30 | 9.182 | ||
| Pfam | 295 | 320 | 26 | 1.4E-10 | ||
| SMART | 295 | 319 | 25 | 0.27 | ||
| ProSitePatterns | 297 | 319 | 23 | - | ||
| MobiDBLite | 307 | 592 | 286 | - | – | |
| MobiDBLite | 307 | 329 | 23 | - | – | |
| Coils | 326 | 346 | 21 | - | – | |
| MobiDBLite | 330 | 346 | 17 | - | – | |
| Coils | 371 | 391 | 21 | - | – | |
| MobiDBLite | 374 | 397 | 24 | - | – | |
| MobiDBLite | 449 | 465 | 17 | - | – | |
| MobiDBLite | 517 | 543 | 27 | - | – | |
| MobiDBLite | 544 | 579 | 36 | - | – | |
| ProSiteProfiles | 594 | 623 | 30 | 9.099 | ||
| SMART | 594 | 618 | 25 | 6.4 | ||
| ProSitePatterns | 596 | 618 | 23 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. |
Expression pattern of LotjaGi4g1v0254500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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