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SM00451

Source: SMART

Description

No description is available for this domain.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003676
Molecular function Nucleic acid binding Interacting selectively and non-covalently with any nucleic acid.
Subterm of
GO:0008270
Molecular function Zinc ion binding Interacting selectively and non-covalently with zinc (Zn) ions.
Subterm of

Associated Lotus transcripts 47

Transcript Name Description Predicted domains Domain count
Lj0g3v0102879.1
– PREDICTED: zinc finger protein 593-like [Cucumis sativus] gi|449451052|ref|XP_004143276.1|
Domains
10
Lj0g3v0192159.1
– PREDICTED: dnaJ homolog subfamily C member 21-like [Glycine max] gi|356511845|ref|XP_003524632.1|
Domains
13
Lj0g3v0199689.1
– Uncharacterized protein TCM_005599 [Theobroma cacao] gi|508704432|gb|EOX96328.1|
Domains
9
Lj0g3v0199689.2
– Uncharacterized protein TCM_005599 [Theobroma cacao] gi|508704432|gb|EOX96328.1|
Domains
15
Lj1g3v3006710.1
– PREDICTED: zinc finger RNA-binding protein-like [Cicer arietinum] gi|502126918|ref|XP_004499491.1|
Domains
11
Lj1g3v3006720.1
– PREDICTED: zinc finger RNA-binding protein-like [Cicer arietinum] gi|502126918|ref|XP_004499491.1|
Domains
9
Lj1g3v4789540.1
– C2H2 and C2HC zinc fingers superfamily protein isoform 1 [Theobroma cacao] gi|508719731|gb|EOY11628.1|
Domains
7
Lj3g3v0642600.1
– PREDICTED: splicing factor 3A subunit 2-like [Cicer arietinum] gi|502155744|ref|XP_004510177.1|
Domains
12
Lj4g3v0387230.1
– HVA22-like protein a [Medicago truncatula] gi|357476185|ref|XP_003608378.1|
Domains
14
Lj4g3v0387230.2
– HVA22-like protein a [Medicago truncatula] gi|357476187|ref|XP_003608379.1|
Domains
18
Lj4g3v0387230.3
– HVA22-like protein a [Medicago truncatula] gi|357476185|ref|XP_003608378.1|
Domains
18
Lj4g3v0388240.1
– HVA22-like protein a [Medicago truncatula] gi|357476187|ref|XP_003608379.1|
Domains
10
Lj4g3v0575060.1
– WW domain-binding protein [Medicago truncatula] gi|357475471|ref|XP_003608021.1|
Domains
9
Lj4g3v1719700.1
– PREDICTED: dnaJ homolog subfamily C member 21-like [Glycine max] gi|356511845|ref|XP_003524632.1|
Domains
12
Lj4g3v1983680.1
– HVA22-like protein a [Medicago truncatula] gi|357476185|ref|XP_003608378.1|
Domains
8
Lj4g3v1985740.1
– Uncharacterized protein TCM_037031 [Theobroma cacao] gi|508782264|gb|EOY29520.1|
Domains
7
Lj5g3v0586630.1
– PREDICTED: zinc finger protein 622-like [Glycine max] gi|356563786|ref|XP_003550140.1|
Domains
11
Lj5g3v1263990.1
– C2H2 and C2HC zinc fingers superfamily protein isoform 1 [Theobroma cacao] gi|508727165|gb|EOY19062.1|
Domains
12
Lj5g3v1671380.1
– PREDICTED: U1 small nuclear ribonucleoprotein C-like isoform X1 [Cicer arietinum] gi|502117894|ref|XP_004495998.1|
Domains
13
LotjaGi1g1v0135400.1
– HVA22-like protein; TAIR: AT1G74520.1 HVA22 homologue A; Swiss-Prot: sp|Q9S7V4|HA22A_ARATH HVA22-like protein a; TrEMBL-Plants: tr|A0A0L9UXN1|A0A0L9UXN1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0135400
Domains
22
LotjaGi1g1v0190900.1
– Zinc finger protein; TAIR: AT5G61190.1 putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain-containing protein; Swiss-Prot: sp|Q8AVN9|ZN346_XENLA Zinc finger protein 346; TrEMBL-Plants: tr|A0A072UVJ5|A0A072UVJ5_MEDTR C2H2 type zf-met: zinc-finger protein; Found in the gene: LotjaGi1g1v0190900
Domains
11
LotjaGi1g1v0509600_LC.1
– Zinc finger protein; TAIR: AT3G29310.1 calmodulin-binding protein-like protein; Swiss-Prot: sp|Q9LIB3|BAG8_ARATH BAG family molecular chaperone regulator 8, chloroplastic; TrEMBL-Plants: tr|C6TD17|C6TD17_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0509600_LC
Domains
12
LotjaGi1g1v0509700.1
– Zinc finger protein; TAIR: AT5G61190.1 putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain-containing protein; Swiss-Prot: sp|Q6PBT9|Z385B_DANRE Zinc finger protein 385B; TrEMBL-Plants: tr|V7B1Q0|V7B1Q0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0509700
Domains
11
LotjaGi1g1v0744200_LC.1
– U1 small nuclear ribonucleoprotein C; TAIR: AT4G03120.1 C2H2 and C2HC zinc fingers superfamily protein; Swiss-Prot: sp|F6HQ26|RU1C_VITVI U1 small nuclear ribonucleoprotein C; TrEMBL-Plants: tr|A0A072U5H3|A0A072U5H3_MEDTR U1 small nuclear ribonucleoprotein C; Found in the gene: LotjaGi1g1v0744200_LC
Domains
17
LotjaGi1g1v0747900.1
– Zinc finger matrin-type 2; TAIR: AT3G05760.1 C2H2 and C2HC zinc fingers superfamily protein; Swiss-Prot: sp|Q96NC0|ZMAT2_HUMAN Zinc finger matrin-type protein 2; TrEMBL-Plants: tr|I3SLF9|I3SLF9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0747900
Domains
11
LotjaGi3g1v0075400.1
– Splicing factor 3A subunit 2; TAIR: AT2G32600.1 hydroxyproline-rich glycoprotein family protein; Swiss-Prot: sp|Q15428|SF3A2_HUMAN Splicing factor 3A subunit 2; TrEMBL-Plants: tr|I1MCD5|I1MCD5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0075400
Domains
13
LotjaGi3g1v0075400.2
– Splicing factor 3A subunit 2; TAIR: AT2G32600.1 hydroxyproline-rich glycoprotein family protein; Swiss-Prot: sp|Q15428|SF3A2_HUMAN Splicing factor 3A subunit 2; TrEMBL-Plants: tr|A0A1J7GPB1|A0A1J7GPB1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0075400
Domains
13
LotjaGi3g1v0205100.1
– Zinc finger protein; TAIR: AT5G61190.2 putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain-containing protein; Swiss-Prot: sp|O59811|REI1_SCHPO Cytoplasmic 60S subunit biogenesis factor SPCC550.15c; TrEMBL-Plants: tr|V7AMM2|V7AMM2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0205100
Domains
11
LotjaGi3g1v0205100.2
– Zinc finger protein; TAIR: AT5G61190.2 putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain-containing protein; Swiss-Prot: sp|O59811|REI1_SCHPO Cytoplasmic 60S subunit biogenesis factor SPCC550.15c; TrEMBL-Plants: tr|V7AMM2|V7AMM2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0205100
Domains
17
LotjaGi4g1v0040600.1
– HVA22-like protein; TAIR: AT1G74520.1 HVA22 homologue A; Swiss-Prot: sp|Q9S7V4|HA22A_ARATH HVA22-like protein a; TrEMBL-Plants: tr|A0A151T2F4|A0A151T2F4_CAJCA HVA22-like protein; Found in the gene: LotjaGi4g1v0040600
Domains
21
LotjaGi4g1v0040700.1
– HVA22-like protein; TAIR: AT1G74520.1 HVA22 homologue A; Swiss-Prot: sp|Q9S7V4|HA22A_ARATH HVA22-like protein a; TrEMBL-Plants: tr|I1KQX1|I1KQX1_SOYBN HVA22-like protein; Found in the gene: LotjaGi4g1v0040700
Domains
20
LotjaGi4g1v0040700.2
– HVA22-like protein; TAIR: AT1G69700.1 HVA22 homologue C; Swiss-Prot: sp|Q9S7V4|HA22A_ARATH HVA22-like protein a; TrEMBL-Plants: tr|A0A151T2F4|A0A151T2F4_CAJCA HVA22-like protein; Found in the gene: LotjaGi4g1v0040700
Domains
20
LotjaGi4g1v0040800.1
– HVA22-like protein; TAIR: AT1G74520.1 HVA22 homologue A; Swiss-Prot: sp|Q9S7V4|HA22A_ARATH HVA22-like protein a; TrEMBL-Plants: tr|G7JV31|G7JV31_MEDTR TB2/DP1, HVA22 family protein; Found in the gene: LotjaGi4g1v0040800
Domains
18
LotjaGi4g1v0071400.1
– U1 small nuclear ribonucleoprotein C; TAIR: AT1G49590.1 C2H2 and C2HC zinc fingers superfamily protein; Swiss-Prot: sp|Q7XA66|ZOP1_ARATH Zinc finger protein ZOP1; TrEMBL-Plants: tr|I3S6A8|I3S6A8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0071400
Domains
15
LotjaGi4g1v0254500.1
– Chaperone protein DnaJ; TAIR: AT1G74250.1 DNAJ heat shock N-terminal domain-containing protein; Swiss-Prot: sp|Q9C911|JJJ1_ARATH DNAJ protein JJJ1 homolog; TrEMBL-Plants: tr|A0A1J7HZV7|A0A1J7HZV7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0254500
Domains
25
LotjaGi4g1v0288800_LC.1
– Zinc finger protein 385D; TAIR: AT2G19380.1 RNA recognition motif (RRM)-containing protein; Swiss-Prot: sp|Q6AXX3|Z385D_RAT Zinc finger protein 385D; TrEMBL-Plants: tr|G7JFL6|G7JFL6_MEDTR C2H2 type zf-met: zinc-finger protein; Found in the gene: LotjaGi4g1v0288800_LC
Domains
10
LotjaGi4g1v0288800_LC.2
– Zinc finger protein 385D; TAIR: AT2G19380.1 RNA recognition motif (RRM)-containing protein; Swiss-Prot: sp|Q6AXX3|Z385D_RAT Zinc finger protein 385D; TrEMBL-Plants: tr|G7JFL6|G7JFL6_MEDTR C2H2 type zf-met: zinc-finger protein; Found in the gene: LotjaGi4g1v0288800_LC
Domains
11
LotjaGi4g1v0288800_LC.3
– Zinc finger protein 385D; TAIR: AT2G19380.1 RNA recognition motif (RRM)-containing protein; Swiss-Prot: sp|Q6AXX3|Z385D_RAT Zinc finger protein 385D; TrEMBL-Plants: tr|G7JFL6|G7JFL6_MEDTR C2H2 type zf-met: zinc-finger protein; Found in the gene: LotjaGi4g1v0288800_LC
Domains
11
LotjaGi4g1v0288800_LC.4
– Zinc finger protein 385D; TAIR: AT2G19380.1 RNA recognition motif (RRM)-containing protein; Swiss-Prot: sp|Q6AXX3|Z385D_RAT Zinc finger protein 385D; TrEMBL-Plants: tr|G7JFL6|G7JFL6_MEDTR C2H2 type zf-met: zinc-finger protein; Found in the gene: LotjaGi4g1v0288800_LC
Domains
11
LotjaGi4g1v0288800_LC.5
– Zinc finger protein 385D; TAIR: AT2G19380.1 RNA recognition motif (RRM)-containing protein; Swiss-Prot: sp|Q6AXX3|Z385D_RAT Zinc finger protein 385D; TrEMBL-Plants: tr|G7JFL6|G7JFL6_MEDTR C2H2 type zf-met: zinc-finger protein; Found in the gene: LotjaGi4g1v0288800_LC
Domains
11
LotjaGi4g1v0288800_LC.6
– Zinc finger protein 385D; TAIR: AT2G19380.1 RNA recognition motif (RRM)-containing protein; Swiss-Prot: sp|Q6AXX3|Z385D_RAT Zinc finger protein 385D; TrEMBL-Plants: tr|G7JFL6|G7JFL6_MEDTR C2H2 type zf-met: zinc-finger protein; Found in the gene: LotjaGi4g1v0288800_LC
Domains
11
LotjaGi4g1v0288800_LC.7
– 30S ribosomal protein S3; TAIR: AT2G19380.1 RNA recognition motif (RRM)-containing protein; Swiss-Prot: sp|O64571|UBA1C_ARATH UBP1-associated proteins 1C; TrEMBL-Plants: tr|A0A1J7J0K1|A0A1J7J0K1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0288800_LC
Domains
12
LotjaGi4g1v0288900.1
– Zinc finger protein; TAIR: AT2G24030.1 zinc ion binding / nucleic acid binding protein; Swiss-Prot: sp|Q9UPR6|ZFR2_HUMAN Zinc finger RNA-binding protein 2; TrEMBL-Plants: tr|G7JFL6|G7JFL6_MEDTR C2H2 type zf-met: zinc-finger protein; Found in the gene: LotjaGi4g1v0288900
Domains
12
LotjaGi4g1v0328300.1
– Zinc finger RNA-binding protein; TAIR: AT2G19385.1 zinc ion binding protein; Swiss-Prot: sp|O64571|UBA1C_ARATH UBP1-associated proteins 1C; TrEMBL-Plants: tr|V7CCJ3|V7CCJ3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0328300
Domains
13
LotjaGi5g1v0065800.1
– Zinc finger protein; TAIR: AT4G31420.1 Zinc finger protein 622; Swiss-Prot: sp|Q8H1G5|REIL1_ARATH Cytoplasmic 60S subunit biogenesis factor REI1 homolog 1; TrEMBL-Plants: tr|I3SNF7|I3SNF7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0065800
Domains
14
LotjaGi5g1v0082800.1
– Zinc finger family protein; TAIR: AT2G36930.1 zinc finger (C2H2 type) family protein; Swiss-Prot: sp|B0BLT0|ZN593_XENTR Zinc finger protein 593; TrEMBL-Plants: tr|I3T688|I3T688_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0082800
Domains
10
LotjaGi5g1v0261800.1
– U1 small nuclear ribonucleoprotein C; TAIR: AT4G03120.1 C2H2 and C2HC zinc fingers superfamily protein; Swiss-Prot: sp|F6HQ26|RU1C_VITVI U1 small nuclear ribonucleoprotein C; TrEMBL-Plants: tr|I3S8F7|I3S8F7_LOTJA U1 small nuclear ribonucleoprotein C; Found in the gene: LotjaGi5g1v0261800
Domains
15

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 2.13