Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0302600 |
| Transcript ID | LotjaGi4g1v0302600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like kinase; TAIR: AT1G34300.1 lectin protein kinase family protein; Swiss-Prot: sp|Q9XID3|Y1343_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300; TrEMBL-Plants: tr|K7LBZ3|K7LBZ3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0302600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:67749584..67751094) extracted from Lotus japonicus Gifu genome v1.2.
TCACTAGTTTACATGATAACTTGTAGCATTTTTAATTACTCTCTTGTTTCTGTCTCAAGCATTTGTAACATCTAGTTGGG AGAATGGATCAATCCTCAGGTGAACATAAACTAGATGCAATTGTTGGTGATTTTGTGTTGATGGGTAGGATTAATCCTAG TTTCTTCTTAAGCAAGCTTTAGCATAATATAGTGAGTCTTATATCTTTGCTGATTGAATCCTTTCATGTTGCTGCAGTTC TGGTAATTCTGCTTAACCTTGCTCTAATTGTTTGGGCTGTAAATTGCTGCCTGAGGTGTTTTCACAAAGATGTCAGCAGC ACAGAGAATTCATGCTCACAATCTCAGACATTCAATGTATACAAATTCATGAACGACATGGAAAGAGAGAAGCTGATCAA GTTTACCTGTAAAGAGTTAAGGGTTGCTACTAACAATTTCTCTAAAAAATTGGGGTCAGGAGGATGTGGAACAGTGTATT TGGGAAATTTAAGCACTGGAGTCAATGTAGCTGTCAAGGTCTTACATGAAAGTTCTGATCACAAGAGAGTTAAGCAGCAG TTCATGGCAGAGGTGAGTACAATTGGAAGGGCTCATCACTTGAATCTGGTTCGGCTCTATGGATTTTGCTTTGAATGGAA ACTAAGAGCGTTAGTTTATGAGTATGTAGCGAATGGTTCGCTTGACAAGTATCTATTTCATGAAGGCGAGACCTTAGGAT TCGAAAAGCTTCACGAGATTGCTGTTGGAACCGCGAGAGGCATTGCGTACTTGCACGAAGAGTGCCCCCAGCAAATAGTC CACTATGACATAAAACCAGGAAATGTTCTCTTAGATGAGAAATTTTCTCCTAAAGTTGCGGATTTCGGTCTCGCTAAGCT TTCTAATAGAGAAAACAAGCATATAACCATAACAGGAGGAAGGGGAACTCCTGGTTATGCTGCGCCGGAGCTTTGGTTTC CATTTCCCGTGACTCACAAGTGTGATGTTTACAGTTTTGGAATGCTGTTGTTTGAAATCATAGGTAGGAGAAGGAACTTT GATACTAGTCTTCCAGAAAGTCAAGAATGGTTTCCAAGGTGGGTTTGGGAAAAATTTGATTCTGGAAAACTGGAAGAGTT GAGAATAGCTTGTCGGAATGAGGAGAAAAATATGGAGATAGTAGAGAGAATGAGTAAGGTAGCTTTATGGTGTGTCCAGT ACAGGTCAGAGTTGAGGCCTTTAATGAGTGGTGTGGTGAGAATGTTGGAAGGTGTAGTGGAAATTCCAAAACCTTTGAAT CCTTTTCAAACCATGATGGTTGGGACTCTTCCTAACCAAACAAATCATCCATCAGATACCACTGTTTCTTCAGGTTGTGG CTGTGCTACTCCTATCTTGACAATACTTGATGTAGAATTGGCCTCTAGCTAAGTGTTCCTCAGATTTTGTATTTGTACTT GGTTAAGGAAACAAATTGATTGTTTCCTTCTCAACATAGCTGGGAGTGGCTCATCTCCAAAGCATTTTTTT
CDS sequence (LotjaGi4g1v0302600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATCAATCCTCAGGTGAACATAAACTAGATGCAATTGTTGGTGATTTTGTGTTGATGGTTCTGGTAATTCTGCTTAA CCTTGCTCTAATTGTTTGGGCTGTAAATTGCTGCCTGAGGTGTTTTCACAAAGATGTCAGCAGCACAGAGAATTCATGCT CACAATCTCAGACATTCAATGTATACAAATTCATGAACGACATGGAAAGAGAGAAGCTGATCAAGTTTACCTGTAAAGAG TTAAGGGTTGCTACTAACAATTTCTCTAAAAAATTGGGGTCAGGAGGATGTGGAACAGTGTATTTGGGAAATTTAAGCAC TGGAGTCAATGTAGCTGTCAAGGTCTTACATGAAAGTTCTGATCACAAGAGAGTTAAGCAGCAGTTCATGGCAGAGGTGA GTACAATTGGAAGGGCTCATCACTTGAATCTGGTTCGGCTCTATGGATTTTGCTTTGAATGGAAACTAAGAGCGTTAGTT TATGAGTATGTAGCGAATGGTTCGCTTGACAAGTATCTATTTCATGAAGGCGAGACCTTAGGATTCGAAAAGCTTCACGA GATTGCTGTTGGAACCGCGAGAGGCATTGCGTACTTGCACGAAGAGTGCCCCCAGCAAATAGTCCACTATGACATAAAAC CAGGAAATGTTCTCTTAGATGAGAAATTTTCTCCTAAAGTTGCGGATTTCGGTCTCGCTAAGCTTTCTAATAGAGAAAAC AAGCATATAACCATAACAGGAGGAAGGGGAACTCCTGGTTATGCTGCGCCGGAGCTTTGGTTTCCATTTCCCGTGACTCA CAAGTGTGATGTTTACAGTTTTGGAATGCTGTTGTTTGAAATCATAGGTAGGAGAAGGAACTTTGATACTAGTCTTCCAG AAAGTCAAGAATGGTTTCCAAGGTGGGTTTGGGAAAAATTTGATTCTGGAAAACTGGAAGAGTTGAGAATAGCTTGTCGG AATGAGGAGAAAAATATGGAGATAGTAGAGAGAATGAGTAAGGTAGCTTTATGGTGTGTCCAGTACAGGTCAGAGTTGAG GCCTTTAATGAGTGGTGTGGTGAGAATGTTGGAAGGTGTAGTGGAAATTCCAAAACCTTTGAATCCTTTTCAAACCATGA TGGTTGGGACTCTTCCTAACCAAACAAATCATCCATCAGATACCACTGTTTCTTCAGGTTGTGGCTGTGCTACTCCTATC TTGACAATACTTGATGTAGAATTGGCCTCTAGCTAA
Protein sequence (LotjaGi4g1v0302600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDQSSGEHKLDAIVGDFVLMVLVILLNLALIVWAVNCCLRCFHKDVSSTENSCSQSQTFNVYKFMNDMEREKLIKFTCKE LRVATNNFSKKLGSGGCGTVYLGNLSTGVNVAVKVLHESSDHKRVKQQFMAEVSTIGRAHHLNLVRLYGFCFEWKLRALV YEYVANGSLDKYLFHEGETLGFEKLHEIAVGTARGIAYLHEECPQQIVHYDIKPGNVLLDEKFSPKVADFGLAKLSNREN KHITITGGRGTPGYAAPELWFPFPVTHKCDVYSFGMLLFEIIGRRRNFDTSLPESQEWFPRWVWEKFDSGKLEELRIACR NEEKNMEIVERMSKVALWCVQYRSELRPLMSGVVRMLEGVVEIPKPLNPFQTMMVGTLPNQTNHPSDTTVSSGCGCATPI LTILDVELASS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | - | – | |
| Phobius | 12 | 35 | 24 | - | – | |
| TMHMM | 13 | 35 | 23 | - | – | |
| PANTHER | 18 | 377 | 360 | 2.8E-169 | – | |
| PANTHER | 18 | 377 | 360 | 2.8E-169 | – | |
| Phobius | 36 | 411 | 376 | - | – | |
| Gene3D | 59 | 163 | 105 | 4.9E-29 | – | |
| SUPERFAMILY | 72 | 358 | 287 | 1.5E-73 | ||
| SMART | 86 | 357 | 272 | 1.1E-30 | ||
| ProSiteProfiles | 86 | 371 | 286 | 34.421 | ||
| Pfam | 88 | 356 | 269 | 1.7E-44 | ||
| Gene3D | 164 | 366 | 203 | 5.2E-53 | – | |
| ProSitePatterns | 207 | 219 | 13 | - | ||
| Coils | 312 | 332 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi4g1v0302600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…