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LotjaGi4g1v0308700.1

Overview

Field Value
Gene ID LotjaGi4g1v0308700
Transcript ID LotjaGi4g1v0308700.1
Lotus japonicus genome version Gifu v1.2
Description Receptor-like kinase; TAIR: AT1G56130.3 Leucine-rich repeat transmembrane protein kinase; Swiss-Prot: sp|C0LGH2|Y1561_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g56130; TrEMBL-Plants: tr|G7JT83|G7JT83_MEDTR Receptor-like kinase; Found in the gene: LotjaGi4g1v0308700
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:68455425..68459630) extracted from Lotus japonicus Gifu genome v1.2.

GCCACCCCCAATTGCATTGTCCCAACATATTACATTGTTTTTCGATCAATTCTATGGAGAATAGAATGCTTCTCTCAAGA TTTCAATTGACAACAACAAAGATTTACAGTAATTAATTAATTGAATACAAAAGCACACAGAAAAATCATCGGATAATGGT TTCTGTTGCCAGTTGTTTAACATAGCTTAGCTGTTCATATATGTCAATACTACTCACCAAGACGTTTGAAGAACTTGAAC TTCAATCACAACCAGAATGTTTGCTTCTGTCCCCAAAAATGCATCGCAGAATACTCCAAGGTTTCATTTCTCAACTTGTT TTTTGTACCAAGATTACTTGTTTTTATTTTTCATGTTCTATATCATGACATAAACTATTGTATATTCTTGCATGCTTTAT GCTTGAGAAAAAGTATTCCATTTTATAACAGACAAAGTTAGAGTATTGGATCATAGAATGTAAAAGATAAAAATCAACTT TCTCAAATTTCTCATGTTCTTAATGATTTCTTTCATCAATGTTGAACTGCAGAGAAATCTCCTTCATCCTCCTCTTCACC CCACAACTCTGGAGCATTGTTCTTTTTCCTTGGAGGGACTGTAGTGCTGATCATATTGCTGATTCTTCTATTTGTATTTT GGAGGCGAATTAAACGGCCAGCAGAGAGGACTACTCCAACTAATGAGCAGCATGGTAATTTTAGGAAAGCAAAATATTTA CATCCTTAATTACAACATGTTTGTATCAGCTTCTTTTTCCTCAGAATTCATTTTTCGCACGCCGAAGCTACTCACAGAAG CTTCTTCTAAGAATTTATTTTGACTTAAGAATTAATTGTAGAAGGATTTCCAACATGCACATGTACAGGAATGTGGTAGC CACCCATGTTTGTGTCTAAAATCAATTCTAGTTGGAGAAGCTTATGATTGTAGCTTCTATCTCATAGTGCCCTTCCCTAT GTGCTAAAGTTTTTGCAAACACATTATAACTAATGCCTACAGCATGTAGTTTTCTTTTTTATTTTGTTGATGGTTAATTG TGTTTGGGATTTGCCATTTGGAAATATATTGAATCAACAGAGAGGATCACGATGGCAGCCTCAACTACTAAAGCTCAACA GACAGGTAATTTAAACAAATCATGCAAAAATATTTTGTGGATTTGGACCTGTGTTTACAAACTGTATCATTGCAAGACCT TTATTGAAGTTCAAGTTTCTATATGTTTTACAGGATTCATGGAATTCGTTAGTGGGAACCTTCGTACAATCAGCTACTTC GATTTCCAGACATTAAGGAAGGCCACCAAGAATTTCCATCGTACAAATCTTCTTGGAAGTGGTGGATTTGGACCTGTTTA TCAGGTATAGGTACTAAATCAGAATCTAATGGCGCTTGCTTTGATTGATCAATTGATTATTTTATCTGGATCGTGATGCT TCTATGAGATTGTATTGCTTGTATAATATCAGATTTTTAAGAAGCAGTAGACAATGTAGGAAAATTCATGTGAACAATAT ATTAACATCATTTATAGGGGTGTTAATTCAAGAACTCACTTTATTAGTTGAGCCTCATATAAATACATGTACTTCTATTG TGGAGATCAAATTTTTTTGTCCTGGTATTTCAATTTTATGTTCCACCGATAGAATCTTGTCATGTCAGTTAGGAAAGACA TGATTGAGGCATTTACAAACTCACATGGTAGTTTTTAATTGACATGTCAGTTTTATTAGTAAGACAGAAGATTTCAATTC CTATTGTGGAAACTATCCTAATTCTTAAGGTGCGTGTGTTTTATCAGGGAAAGTTGGCAGATGGGAGGCTGATTGCTGTT AAGCAATTGTCTCTTGACAAGTCCCAACAAGGAGATAAAGAATTTCTAGCAGAAGTGAGGATGATCACAAGCATCCAACA CAAAAATCTGGTTCGCCTTATGGGGTGTTGCACTGATGGACCTCAAAGGATTCTTGTGTATGAATACATGAAGAACAGAA GTTTGGACCCCTTTGTATATGGTAACCTTTTTTCATCCAATGGCTCATGAGTATTTAATTTGAAGGAGTTGGTTAGTTTA AACAAAACAAGTCCTATGTTGGGTGTTCTTGTGATCAGGAAACAGTGATCAATTTCTAAACTGGAGCACTAGATTCCAAA TAATCCTTGGAGTCGCGCGGGGATTGCAATACCTCCATGAGGATTCACATATAAGAATTGTTCACCGAGATATCAAAGCA AGCAACATTCTTCTTGATGAAAAGTTTCGGCCGAGGATTGGAGATTTTGGGCTAGCTAGGTTCTTCCCTGAAGACCAAGC TTACCTTAGCACACAATTTGCTGGAACATTGTAAGTAATTTTTGCAAATGTAACTACTCAAAAGCATTGATCACTGGTGA AATGAAATCCTCCTATACTAGCTACAGCTAATCATGTCCATCACTTCCATATTTGCTGAGTTTTAATGGTTCTAGTCATT CAAAAAATAGATCAAAACAATGATCTTTAGCAGCATCCTAATGTGTTTGTTATCCTACAACTTCTTATTAAAAATGTCAT TTTTTCTAATGGTTTGAACTAGAGATCCATCAATTCATTCCAAACTGCTTAATTACATTTAGTCAAGTTTTGTATTGATG ATCTTTTCTTGTCTGATTTGTTAAGAGGTTATACAGCTCCTGAATATGCTATTAGAGGAGAACTTTCAGAAAAGGCAGAC ATCTATAGTTTTGGAGTTCTGGTGCTTGAAATCATCTGTTGCAGAAAAAATACAGATCTCACTTTACCATCACAAATGCA GTACCTCCCTGAATATGTAACTTCTCACCTTTCTACTATGATTTTATTTTTCCTCAAAATCAATTCTAGCATCCAGAAGC TACTCACAAAAGCTTCTCCACATAATTGATTTTGACTAAAATCTAGATGAATTTCCAAACATGCTTAAATTTTATCATCG CAGGGTTGGAAACTTTATGAGAAGTCAATGGTGATGGATCTTGTGGATCCTAAGCTGCGCGAAGATGGATTCGTGGAAAA GGATGTGATGCAAGCATTCCATGTGGCCTTCTTGTGCCTTCAGCCTCTTCCAGATATGAGACCAGCCATGTCAGAGATTG TAGCATTGTTGACATTCAAAATTGACATGGTAACAACACCAATGAGGCCAGCTTTCCTTGACCGAAGGCGTAAAATGGAT GAAGAACACCACTCTTGGGAAGCCATATCCAAGTCTTTCAAATCTCCAGGGGCCAGTGATTATTCTCCCTGATGTAAAGC ATGGCTGTTCAAACTTTCTGTCAAGTTGAAATTAGGAGCCATGAACCTTTAAAAAAGAAAGAGGGTGAAAAGCTTAAGGC TCAGGCAAAGTATATATGAACTATCTGAATTATGTAGTTCCTAGACCAACTCTCTTTGCAGAAAATTGACAGTTACAGAG AGAATGTACATCCTTGACAAGAGAGTTCTATGAAGTTTTTGCAGTAAGGCTTGTGATAAGTGCTGCCATGAATCACCAGG CCTGTATAATAGTCTTTAGGTGAGCGTCTTGATGAGTTAGTAGCTTCTTGATGAGTTAGTAGTGTCAAGTAACTACTTAT CCCAAAAGCTTAAGCTGTTGGGTAAGGACTACTTTAATGGTTTTATATTATACTCTAACACGCCCCCTCACGCAAGAACC ATTTGGGCTTGAAGCGTGGATAAATGCACAGGCCCACCTACCATGTGCTTAATTAAATTCCACTTTTTACTTAGAAAGTG AGGGGAGCAAGGATCGAACTCTAGACCTCTTGGCCATAGAGGCTCTGATACCATGACAAACAACCACTTATCCCAAAAGC TTAAGCTGTTGGGTAAGGACTACTTTAATGGTTTTATATTATACTCTAACAAGTAGGATTCTATAAGCCTTCAACTTCCA AACTTTGTATATGTCTGTACACTATAATATGTTTACCTTCATTATTTTATTTCTTTTTGTTTAAAATGTTTTTTTTTTTG GTCAACAGTTTTGTTTAAAATGTTTACCTTCATTATAAAAAGCCTACCTCGCATTAATACCTTATTTTTTATCATAAGAG CAATTTTTAAAAAAATAATTGGCCCATGGGTTAGTCAATTCGGCTTGCAGGTGGGCTGAGTTGGTAAAATAGTAGCCACT GTGAATTTTGGCCTGTCTCAAGAACGTGTTAGCCCTCGAATGAGTT
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0308700.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTCAATACTACTCACCAAGACGTTTGAAGAACTTGAACTTCAATCACAACCAGAATGTTTGCTTCTGTCCCCAAAAAT GCATCGCAGAATACTCCAAGAGAAATCTCCTTCATCCTCCTCTTCACCCCACAACTCTGGAGCATTGTTCTTTTTCCTTG GAGGGACTGTAGTGCTGATCATATTGCTGATTCTTCTATTTGTATTTTGGAGGCGAATTAAACGGCCAGCAGAGAGGACT ACTCCAACTAATGAGCAGCATGAGAGGATCACGATGGCAGCCTCAACTACTAAAGCTCAACAGACAGGATTCATGGAATT CGTTAGTGGGAACCTTCGTACAATCAGCTACTTCGATTTCCAGACATTAAGGAAGGCCACCAAGAATTTCCATCGTACAA ATCTTCTTGGAAGTGGTGGATTTGGACCTGTTTATCAGGGAAAGTTGGCAGATGGGAGGCTGATTGCTGTTAAGCAATTG TCTCTTGACAAGTCCCAACAAGGAGATAAAGAATTTCTAGCAGAAGTGAGGATGATCACAAGCATCCAACACAAAAATCT GGTTCGCCTTATGGGGTGTTGCACTGATGGACCTCAAAGGATTCTTGTGTATGAATACATGAAGAACAGAAGTTTGGACC CCTTTGTATATGGAAACAGTGATCAATTTCTAAACTGGAGCACTAGATTCCAAATAATCCTTGGAGTCGCGCGGGGATTG CAATACCTCCATGAGGATTCACATATAAGAATTGTTCACCGAGATATCAAAGCAAGCAACATTCTTCTTGATGAAAAGTT TCGGCCGAGGATTGGAGATTTTGGGCTAGCTAGGTTCTTCCCTGAAGACCAAGCTTACCTTAGCACACAATTTGCTGGAA CATTAGGTTATACAGCTCCTGAATATGCTATTAGAGGAGAACTTTCAGAAAAGGCAGACATCTATAGTTTTGGAGTTCTG GTGCTTGAAATCATCTGTTGCAGAAAAAATACAGATCTCACTTTACCATCACAAATGCAGTACCTCCCTGAATATGGTTG GAAACTTTATGAGAAGTCAATGGTGATGGATCTTGTGGATCCTAAGCTGCGCGAAGATGGATTCGTGGAAAAGGATGTGA TGCAAGCATTCCATGTGGCCTTCTTGTGCCTTCAGCCTCTTCCAGATATGAGACCAGCCATGTCAGAGATTGTAGCATTG TTGACATTCAAAATTGACATGGTAACAACACCAATGAGGCCAGCTTTCCTTGACCGAAGGCGTAAAATGGATGAAGAACA CCACTCTTGGGAAGCCATATCCAAGTCTTTCAAATCTCCAGGGGCCAGTGATTATTCTCCCTGA
Download CDS Sequence

Protein sequence (LotjaGi4g1v0308700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MSILLTKTFEELELQSQPECLLLSPKMHRRILQEKSPSSSSSPHNSGALFFFLGGTVVLIILLILLFVFWRRIKRPAERT TPTNEQHERITMAASTTKAQQTGFMEFVSGNLRTISYFDFQTLRKATKNFHRTNLLGSGGFGPVYQGKLADGRLIAVKQL SLDKSQQGDKEFLAEVRMITSIQHKNLVRLMGCCTDGPQRILVYEYMKNRSLDPFVYGNSDQFLNWSTRFQIILGVARGL QYLHEDSHIRIVHRDIKASNILLDEKFRPRIGDFGLARFFPEDQAYLSTQFAGTLGYTAPEYAIRGELSEKADIYSFGVL VLEIICCRKNTDLTLPSQMQYLPEYGWKLYEKSMVMDLVDPKLREDGFVEKDVMQAFHVAFLCLQPLPDMRPAMSEIVAL LTFKIDMVTTPMRPAFLDRRRKMDEEHHSWEAISKSFKSPGASDYSP
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius
NON_CYTOPLASMIC_DOMAIN
1 47 47 - –
PANTHER
PTHR27006
37 443 407 3.2E-208 –
PANTHER
PTHR27006:SF21
37 443 407 3.2E-208 –
Phobius
TRANSMEMBRANE
48 70 23 - –
TMHMM
TMhelix
48 70 23 - –
Phobius
CYTOPLASMIC_DOMAIN
71 447 377 - –
Gene3D
G3DSA:3.30.200.20
102 206 105 8.9E-36 –
SUPERFAMILY
SSF56112
116 425 310 1.03E-79
IPR011009
ProSiteProfiles
PS50011
130 403 274 38.223
IPR000719
SMART
SM00220
130 403 274 1.0E-32
IPR000719
Pfam
PF07714
133 400 268 7.1E-47
IPR001245
CDD
cd14066
136 402 267 4.09878E-91 –
Gene3D
G3DSA:1.10.510.10
207 410 204 7.7E-56 –
ProSitePatterns
PS00108
251 263 13 -
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0308700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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