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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0320900 |
| Transcript ID | LotjaGi4g1v0320900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 2Fe-2S ferredoxin; TAIR: AT4G21090.1 MITOCHONDRIAL FERREDOXIN 2; Swiss-Prot: sp|Q8S904|MFDX2_ARATH Adrenodoxin-like protein 2, mitochondrial; TrEMBL-Plants: tr|A0A067KCK0|A0A067KCK0_JATCU Uncharacterized protein; Found in the gene: LotjaGi4g1v0320900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:69868317..69870825) extracted from Lotus japonicus Gifu genome v1.2.
ATAAAGATATCTAAATTGTAGTAATAATTAAGAAAATGCATGAACCTATATAGTGTTACTTTATTGACAAATCAATGGGA GGGAGCGATCGCCAATCCAAGTAAAGTGCCGCGAACCGCTGTGGGCCTGTGGCGTGCCAGTGAAGTTGAAGTCTCCAGTT TCTCTTCCTCTCTTCTCTACGACTTGGAGCCAAGATTCGTTTTTCTCATATCACTTCATCTTCTTTTCCCTGCAAATTTT GGGGATTTTTCACACCCATTATCATGCTAAAACTATAATCCAAATAATCATTTTTGTTTTTTTTTGGCAGGGAATTATAC ATTCATGTGTAGAGCAGCGTATAATCCAAGCGTCATAAATCATGGCCTGCAACCTTCGGTTAGTAATTTTTTGTTTATTT TTCTTATGGCATTTGTTTATGCTGATCTCTGTTTCTCATGTGTAATTTTTTGTTTATTTTTCTAGAAACAGTTTCAAATG CATTCATTCACTAAGTCATACAAGGGAGCCATGTGTGAACAAAATAATTTCCTTTCAACAATGACTACTAACAGCACTAA TGTAAGTTCTTTTCTTTGAGATGATAGATTCTATGGTAGTATGCTATATACTTCTATTAATGTATCACAGCATTCAAAAA CACACTAGTTATTGTGTGTGCATTATAAATATGGATGAAGTAACAATGTTGATCATCTAGATCATTTCACCATTGTTTTA TTAAGATTACTGAAAACTGAAAGAAAATTACTTGCACTGGTGTGCCACAGGGCAAGTTTTTTATTGTAAACTGCTGATTT CTTATTTCTAGCTAGACATGCTTTGGTAGTTGAAGAAGAGCTGTCCAGTATTATATAGCGGGTTTTTTCTCTTGTTAAGT GTTTACTTAGACAAGTGAGAACTTCAAAAAGTGAGGAAATTTTGACTGTTGAGGTTTAGCCACTCTGCTAAACCCTTCCA TGTATGTGGTGTGCATCCAAATATTATTGATTTCATGCTCTCAAGTCTCAACCATATGTGTATGATATTTGAGCAGGAGT TAGGTTGTTGCTAGAGTGTGATTCTTTCAAACAAAACAGAAACAATAACAATCTGTAAGCCTCTGTTGTTGCAGTGGATC ACATTTCCTTGAAATATTTTCCATTCCATGCCCCATGTGATCAAATGTCAATAATCGACGTATTTATCAAATGCCCAATT GGCCTTCTAATCATTCGTGATCCGTCAGTGTAAACTTGCCTTACTATTAGTGTTGTACCTTATCCATATATTTTATTTGA TGATAATAGAGCATCATGTGAGTGTGAATGATAGGTTGAATAATTGAATATGCTTACATGGAATACAGCATCCTTGGTTA AGTACATCAGGGCCCATATCTTCGCCAAATTTTTAAAAACAATTGACATTTGTCAGTTTGCTGATCCCTTCCTTAATACG AGTCAACTTTATGTAGGATATCTGTGACTATTATTGACAAGGATTGCGAGGAAAAGATTATCAAAGTCCCTGTTGGCATG TCTATGTTAGAAGCTACTAATGAAAACGACATTGAACTGGAAGGTAATAGCTATATGGTGACCCTTCTTACACGCTGCAT TTTTCAATTGACAATATGCAATTGTGTTATTGCAGTTCAATTTGCATCCTCAAGTTTCTTCCAAGTCCATTTTCTTTAAC CAAAGTTAATTTCTTATTTGATGTGATTGAAGGAGCATGTGAGGGCTCACTTGCATGTTCAACTTGCCATCTTATAGTCA TGGTAGGTACATCATGGATGATATATGCAGCTAAGTGCTGCTGGATATCAATTTTATTATTCTCCTAATATACCGTTTTC CACTTGCAAGAGGGTCACATTTGAACTTTGTGTAGGACGTAGAATATTACAATAAGTTGGAAGATCCAGCTGATGAGGAA AATGACATGTTGGATCTAGCTTTTGGGCTCACTGAAACGTGGGTTTCTTATCCATGAAATTTGGGATTTCAAAATTTTAT TTTCCATTTTTCCTGCCACAAATTTCCTCTTAGACTAAATTTGGCAGCTCTATGCAGGTCACGTCTGGGTTGCCAAGTGA TTGCTAAACCTGAACTTGATGGAATTCGTTTAGCTATTCCTTCTGCTACTCGAAACTTCGCTGTTGATGGTTATGTGTCG AAACCACACTAGCAAGTACTGGATAAATTCGGGTGTGGTGCAAAGAATGCAGCTATCTCAGTTTTGTAGCTTCTACCGAG TTAGATTAATGAGCATTAATTGATCATGGGCATTATTATTCATATTGAGTTTTGTCTATGATTGCCGACAAACTAGAGTG ATCAAGATCGAATTCGATTAAGCTATAATTGCTTGCCAATAAAATTAGTGTATTATTTCTGCTGTATAAGTAACTTAAGC TTAATTACACACAAGAGGTAGCTTAGTTGGGAACATACGCCGGATGTGTGAAAAGAGCCCCTGTAACTAAATTTTGGATC TGAAATCCTCCTCCATTGACTGGATATTA
CDS sequence (LotjaGi4g1v0320900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATATCTGTGACTATTATTGACAAGGATTGCGAGGAAAAGATTATCAAAGTCCCTGTTGGCATGTCTATGTTAGAAGC TACTAATGAAAACGACATTGAACTGGAAGGAGCATGTGAGGGCTCACTTGCATGTTCAACTTGCCATCTTATAGTCATGG ACGTAGAATATTACAATAAGTTGGAAGATCCAGCTGATGAGGAAAATGACATGTTGGATCTAGCTTTTGGGCTCACTGAA ACGTCACGTCTGGGTTGCCAAGTGATTGCTAAACCTGAACTTGATGGAATTCGTTTAGCTATTCCTTCTGCTACTCGAAA CTTCGCTGTTGATGGTTATGTGTCGAAACCACACTAG
Protein sequence (LotjaGi4g1v0320900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MISVTIIDKDCEEKIIKVPVGMSMLEATNENDIELEGACEGSLACSTCHLIVMDVEYYNKLEDPADEENDMLDLAFGLTE TSRLGCQVIAKPELDGIRLAIPSATRNFAVDGYVSKPH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 1 | 102 | 102 | 4.18E-25 | ||
| Gene3D | 1 | 116 | 116 | 5.2E-38 | ||
| PANTHER | 2 | 118 | 117 | 1.5E-76 | – | |
| ProSiteProfiles | 2 | 105 | 104 | 10.114 | ||
| PANTHER | 2 | 118 | 117 | 1.5E-76 | – | |
| CDD | 4 | 94 | 91 | 6.12627E-9 | ||
| Pfam | 10 | 90 | 81 | 1.8E-10 | ||
| PRINTS | 39 | 49 | 11 | 1.8E-11 | ||
| ProSitePatterns | 39 | 49 | 11 | - | ||
| PRINTS | 59 | 73 | 15 | 1.8E-11 | ||
| PRINTS | 82 | 90 | 9 | 1.8E-11 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Electron transfer activity | Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient. | ||
| Molecular function | Iron-sulfur cluster binding | Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms. | ||
| Molecular function | 2 iron, 2 sulfur cluster binding | Interacting selectively and non-covalently with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands. |
Expression pattern of LotjaGi4g1v0320900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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