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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0321700 |
| Transcript ID | LotjaGi4g1v0321700.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 3-oxoacyl-[acyl]-carrier-protein] synthase; TAIR: AT1G74960.1 fatty acid biosynthesis 1; Swiss-Prot: sp|Q9C9P4|KASC2_ARATH 3-oxoacyl-[acyl]-carrier-protein] synthase II, chloroplastic; TrEMBL-Plants: tr|A0A0L9UY00|A0A0L9UY00_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0321700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:69977443..69982070) extracted from Lotus japonicus Gifu genome v1.2.
GTAACCTGGTTGCTTAAACCTCAGCATATTTATTCTTCGTCAGTAGTTGTCTTCATTGACCAATGTTAATGTGTACCTCC TTGAAAATTGAAGAATATGCTTGCATTACTTAGTTTTAAGCGTTTGACTTTTTCTTTAATGCAATGGTTTTGGCATTACA TTTTTTGAATGATAGGCCTCCTAAGTTGTGCTGATGTAGAAGGATGCCAATTTATAGACATGACTTTTATGTCCCACTAT TCATATTTCATGTTCCAATTGCTCAGTGCTGACCTATGGCTTGGAATTGTAAACTTTCAAGGTAAAACGATGGCCGTAGC TTTGGAACCTGCCCAAGAAATCACAACTCTGAAAAAGCCTCCTACAAAACAAAGGCGAGTAGTTGTGACAGGCTTGGGCG TGGTTACACCACTTGGTCATGATCCAGATGTCTTCTACAATAATTTACTCGATGGTGTTAGTGGCATAAGTGAGATCGAG ACTTTTGATTGTGCAGAATTTCCGACAGTAAGTTATTTGAACTAAATTTTTTTCAGTTGTTTCCTGCTGCAGACATTGTT CTGAATACTCTTTTATTTTTTTCTCTCTAGAGGATAGCTGGAGAAATTAAGTCTTTCTCAGCGGATGGCTGGGTAGCACC AAAACTTTCAAAGAGAATGGATAAATTTATGCTTTACATGCTTATAGCTGGTAAAAAGGCCTTGGCTGATGGTGGGTTTA CTGAAGATATAATGAATGAGTTAGATAAACGCAAGTGTGGAGTTTTGATTGGCTCAGCAATGGGTGGCATGAAGGTGACC GACATTTACTCTTCCGCATGTTGAGATTCAAAAGTTGAAGAAAAATTAGGACTTTTGTTGTTTTCAGTAGTTCAATTTTA TATCTAATAGCATCATGAGATTGTGAGTAAGTTGTAACACCTGTTGGTATTGTGGATTAAATTTACTGTTGAATGCAAAT CAAAATGGAGCCAGGACTATATTATACGTTGCAATGTTATGGCATTGATTGGTTGACCATTTTGTTATTATTCTGTGTCT GAACAGGTTTTCAATGATGCTGTGGAAGCTTTACGAATATCATATAAGAAGATGAATCCTTTTTGTGTACCTTTTGCCAC AACAAATATGGGTTCTGCCATGCTTGCAATGGATCTGGTTAGTTTAAATAGATTTTAGCGCTTACTATAGACCATAATTA GGTGTCTTAGTTTTACTCATAAGCTTCTTTATTTTTCCTGGTGATGTTTGATTAATGATTCTTTTATGGATTGCAGGGAT GGATGGGCCCTAATTATTCTATCTCTACAGCTTGTGCTACAAGTAACTTTTGTATACTGAATGCAGCAAACCATATCATT AGAGGTGAAGCCGTAAGTATTTTACTTTGATACTTGCTCTTAGGATCCCGGATTTCTTCCCCAAACAATGAGATTTTCAT TTTATCCAAAGGTGCTAACAAATTTAATAATTGTGGAATATTTCTGCAGGATGTGATGCTTTGTGGTGGCTCAGATGCTA CTATTATACCAATTGGTATTCTTTTGTTACTCATTTTATGGCTTGTATGGAGTCATCATGCCATGAACCTGACATGTATC CTACAATCATTGATGCAGGTTTGGGAGGCTTTGTGGCATGCAGGGCACTCTCACAGAGAAATACCGATCCTTCCAAAGCT TCCCGCCCTTGGGATATAGTAAGACTATTACATTCTTGGTGCTTTTTACCCCTACTTAAATTGGATGGGTATGCCTTGTC TTTTGTAATAATTTACAACGGTTACCTTACATAAACCTTTGTGAAACTTAGAAGGTTCATCAAGCAAACTTTGTTTGTTA AATTAAGCACATTGTAATTTATGGGAGTCACTACTTCAGATATGTGATAAGATTCCGAAGCTCTTCTTCAGTGATAAGAT CTGTAGGACTTTTTTGTGTTTATTTTAGTGGTTATCTTTTTTGTTTTAGAATTCTTTATTCTCCTTATTTTTGTGCTGTC TTCTTATTCTATTTCTAATACTGCTTGTTTTATATAATAAAAATTAAATCCAGAAACACCAAAAGTTACATATTATTTGT GAACACCTAGGATACAAAGACACCAACTGCCAAAGTTTAAAAAGCAATACAGCAATATGAATCTGTGAAGTCATGCAGAT CTAATAGAACAAAAGACAACTAGAAATTATGTTCAATTTCCTGAGCTGACATATAGTTTCAGTTTTGAAAAACACTAATT AAACTTGAATTTATTTTAAAAAAGTAATCGGTACATGAATTGCTATGTCACAGAAACTAAATGCTTGCAGTTTTGGTCTT TATATCCATTCTATTCTACACCTTGTCCTGATCTTGTGTTACTAACCATCAGCTAATTGTTATGATATTACAGAATCGTG ATGGATTTGTCATGGGGGAAGGGGCTGGAGTTTTGCTTTTAGAAGAATTGGAGCATGCTAAGGTATTTCTAATTTGATTT AATAATTGGTACCTTGTGTTAGGATTTACCTAATTCTTCAGTTCCCTCCAACAGTATTTAGAGCGCTTGATGCATCTGTT GTATCTTGTTTTAGGATTGTTCTTCATACTTGTCATCACTTCACTGCCTATTATTTTTCATTTTACTGCAGTCTTGATTT GACATTATATCATCCCTAAATTAAGTAAATATATCCCTTTTGGCTATAATTTGTTAAACTATCCAATTTTTTACCTTGCA GAAAAGAGGTGCAGTCATATACGCCGAATTCCTTGGTGGGAGTTTTACCTCTGATGCATATCATGTAACTGAACCACGTC CTGATGGTAAATATTAAATCTTCAAGGTCCTTTAATTTATATAATTTTAAAAGCACAAATCATCTATAAATGTACTGATC ACCTTCGTATAAACATCTTGATGAACATGGTCTGGGTTTAAAAGTACTTCTACAGTTCTACCCTTTAGGATCTCAAGAGA GAACAGTGAAATAAGACAAGCGTATGATATTTTCTTCTTGGTTCTTATTATATTGCTTACTTGGTGGAGTAATTTCATGA CAATAATAGTATAGAAGCTTAAAGTTGCATATCTTTAGTCTAACTTTTGTTTACTCATGCTATGTTTCAACACTTCTGTT CATATGGATGCCTATGCTTCTATTTGTGTAGCATTTGTCAGTTTGAGTTCATAAAAATTAGGCTTTTGTGATGAAGCTGT TGCACTGTCTGGAAATGCAAGTGCATCTTCTATATTTGTCAAATCATTTAAGGCATATTATAAAAGAAAAGAAGCGCTTG TATATCTTTCTGGTCACTTATAAATTATAATGCGAATGTGGAGCTTCTGCATTCAGACTTGTTTTATGTCACATGTTTCT TTCTGTTAGTAGTTATTACAAATTCTGTGTGTGATTGAGACGTTCAAAAATCATCCTTTGTGATCTTAAAAACTTTGGAA TGTATTACACTTTCATCATGACAATTTTAGAGCTATGATTCATTCACACTTGCACTTCATTTCCACCTTCAATCTATATA TCTATCTCTCTCTTCTCTTTCAATCATATAATCAATCAAATCTCTTACTCTATCTCTTACTCTCTGCACTTCATTTCCAC TCCATTTACACTTTTTGGGGAGTGTGAATGAAACTTTATTGACAATTTTAGTAGACTAAAAGTGATTGACTACTTGGTGA GAAATGACATTCTTGGAGATCAGTGACTCCAGACTCAGGCTGGAACTTATGTTTCTTTATCCCATCCTCAAACAGGGGCT GGTGTAATACTTTGCATTGAGAAGGCATTAGCTCAGTCTGGAGTATCAAGAGAGGATGTGAATTACATAAATGCACACGC CACATCCACACCAGCTGGAGATCTTAAAGAGTACCAGGCTCTTATTCACTGTTTTGGTAAAAACCCCGAGGTAAATTTCC CTTTTCATGTTCTTATATGACTTGCTAGCCAATTCAAAGATAATTGATTTGGTGCTCTCTTTAATTGTTTTGATTTGCAC TGTTACTTATACTGCCATGCTTAGCAAAAGATGTCTTAATGTACAGCTAAAAGTGAATTCCACGAAATCTATGATTGGTC ATCTACTAGGAGCAGCTGGTGGTGTAGAAGCTGTAGCAACAATTCAGGTAAAAAAACAAATGAATCACTTTTTTATGAAA TGTGAACAGTTGGTTTCATTTTTACAATGAAACATATCTGATAGCATGTTTTGATCAACTTTCCTTTTATCAGAATCAAT TCTTAAACCCAGTTACTGACATAAGCTACTCCCCAAATTGATTCTGGCTCTAGAATCAGTTATAGAGGAATTTTCAAACA TGCACTGATCTATGTTTTTCCATTATGTAGGCAATCAGAAGTGGGTGGGTTCATCCGAATATCAACCTAGAAAACCCAGA TAAAGGAGTGGTATGTTTACCTGTTGCAACATCCATCCTTTGTTTAAAATTGTGCATTTACCGGGTTTACAGTTATCTAA TTTGGTTGTCTAATAAACATATTTAAACCAGGATGCTGCAGTGCTTGTTGGCCCAAAGAAAGAGAGGCTGGATATCAAGG CAGCCTTATCTAATTCATTTGGTTTTGGGGGTCACAATTCCTCAATCATATTTGCCCCATATAAGTGA
CDS sequence (LotjaGi4g1v0321700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACTTTTATGTCCCACTATTCATATTTCATGTTCCAATTGCTCAGTGCTGACCTATGGCTTGGAATTGTAAACTTTCA AGGTAAAACGATGGCCGTAGCTTTGGAACCTGCCCAAGAAATCACAACTCTGAAAAAGCCTCCTACAAAACAAAGGCGAG TAGTTGTGACAGGCTTGGGCGTGGTTACACCACTTGGTCATGATCCAGATGTCTTCTACAATAATTTACTCGATGGTGTT AGTGGCATAAGTGAGATCGAGACTTTTGATTGTGCAGAATTTCCGACAAGGATAGCTGGAGAAATTAAGTCTTTCTCAGC GGATGGCTGGGTAGCACCAAAACTTTCAAAGAGAATGGATAAATTTATGCTTTACATGCTTATAGCTGGTAAAAAGGCCT TGGCTGATGGTGGGTTTACTGAAGATATAATGAATGAGTTAGATAAACGCAAGTGTGGAGTTTTGATTGGCTCAGCAATG GGTGGCATGAAGGTTTTCAATGATGCTGTGGAAGCTTTACGAATATCATATAAGAAGATGAATCCTTTTTGTGTACCTTT TGCCACAACAAATATGGGTTCTGCCATGCTTGCAATGGATCTGGGATGGATGGGCCCTAATTATTCTATCTCTACAGCTT GTGCTACAAGTAACTTTTGTATACTGAATGCAGCAAACCATATCATTAGAGGTGAAGCCGATGTGATGCTTTGTGGTGGC TCAGATGCTACTATTATACCAATTGGTTTGGGAGGCTTTGTGGCATGCAGGGCACTCTCACAGAGAAATACCGATCCTTC CAAAGCTTCCCGCCCTTGGGATATAAATCGTGATGGATTTGTCATGGGGGAAGGGGCTGGAGTTTTGCTTTTAGAAGAAT TGGAGCATGCTAAGAAAAGAGGTGCAGTCATATACGCCGAATTCCTTGGTGGGAGTTTTACCTCTGATGCATATCATGTA ACTGAACCACGTCCTGATGGGGCTGGTGTAATACTTTGCATTGAGAAGGCATTAGCTCAGTCTGGAGTATCAAGAGAGGA TGTGAATTACATAAATGCACACGCCACATCCACACCAGCTGGAGATCTTAAAGAGTACCAGGCTCTTATTCACTGTTTTG GTAAAAACCCCGAGCTAAAAGTGAATTCCACGAAATCTATGATTGGTCATCTACTAGGAGCAGCTGGTGGTGTAGAAGCT GTAGCAACAATTCAGGCAATCAGAAGTGGGTGGGTTCATCCGAATATCAACCTAGAAAACCCAGATAAAGGAGTGGATGC TGCAGTGCTTGTTGGCCCAAAGAAAGAGAGGCTGGATATCAAGGCAGCCTTATCTAATTCATTTGGTTTTGGGGGTCACA ATTCCTCAATCATATTTGCCCCATATAAGTGA
Protein sequence (LotjaGi4g1v0321700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTFMSHYSYFMFQLLSADLWLGIVNFQGKTMAVALEPAQEITTLKKPPTKQRRVVVTGLGVVTPLGHDPDVFYNNLLDGV SGISEIETFDCAEFPTRIAGEIKSFSADGWVAPKLSKRMDKFMLYMLIAGKKALADGGFTEDIMNELDKRKCGVLIGSAM GGMKVFNDAVEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEADVMLCGG SDATIIPIGLGGFVACRALSQRNTDPSKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAVIYAEFLGGSFTSDAYHV TEPRPDGAGVILCIEKALAQSGVSREDVNYINAHATSTPAGDLKEYQALIHCFGKNPELKVNSTKSMIGHLLGAAGGVEA VATIQAIRSGWVHPNINLENPDKGVDAAVLVGPKKERLDIKAALSNSFGFGGHNSSIIFAPYK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 32 | 32 | - | – | |
| SignalP_EUK | 1 | 26 | 26 | - | – | |
| Phobius | 1 | 13 | 13 | - | – | |
| Phobius | 14 | 24 | 11 | - | – | |
| Phobius | 25 | 32 | 8 | - | – | |
| PANTHER | 27 | 463 | 437 | 2.3E-276 | ||
| PANTHER | 27 | 463 | 437 | 2.3E-276 | – | |
| Phobius | 33 | 463 | 431 | - | – | |
| Gene3D | 39 | 305 | 267 | 1.4E-79 | ||
| PIRSF | 49 | 463 | 415 | 2.9E-170 | ||
| TIGRFAM | 52 | 459 | 408 | 3.1E-155 | ||
| SUPERFAMILY | 52 | 302 | 251 | 4.97E-69 | ||
| Pfam | 52 | 297 | 246 | 1.4E-58 | ||
| SMART | 54 | 462 | 409 | 1.1E-14 | ||
| CDD | 64 | 459 | 396 | 0.0 | – | |
| ProSitePatterns | 205 | 221 | 17 | - | ||
| SUPERFAMILY | 265 | 461 | 197 | 2.16E-63 | ||
| Pfam | 305 | 418 | 114 | 2.0E-33 | ||
| Gene3D | 312 | 463 | 152 | 3.3E-45 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Biological process | Fatty acid biosynthetic process | The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes. | ||
| Molecular function | Transferase activity, transferring acyl groups other than amino-acyl groups | Catalysis of the transfer of an acyl group, other than amino-acyl, from one compound (donor) to another (acceptor). |
Expression pattern of LotjaGi4g1v0321700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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