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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0348600 |
| Transcript ID | LotjaGi4g1v0348600.4 |
| Related isoforms 8 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pyruvate, phosphate dikinase; TAIR: AT4G15530.1 pyruvate orthophosphate dikinase; Swiss-Prot: sp|Q39734|PPDK_FLABR Pyruvate, phosphate dikinase, chloroplastic; TrEMBL-Plants: tr|A0A151STM8|A0A151STM8_CAJCA Pyruvate, phosphate dikinase; Found in the gene: LotjaGi4g1v0348600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:72734774..72740861) extracted from Lotus japonicus Gifu genome v1.2.
CTGCTTTTGTTTAAACAGCGGGCATTCACTTTTGGCAAAGGTAAAAGTGAAGGAAACAAGGCCATGAAGTCCTTGGTAAG TATTCTTTATCTTGCTATACATATGTTATTTTTCTGGCTGATGAAACACTAATGCATGTTATGTTAAGCAAAACTTGACT TGCTACTTTTAATGTAATGATAAAAAAAATCCTTTGAATTGATGAACAATTGCATGTATGTTAATTATAGTTGGGAGGAA AAGGGGCCAACTTGGCAGAAATGGCAACCATTGGTTTATCTGTGCCCCCTGGACTCACTATATCAACTGAAGCATGTCAA GAGTATCAAGATAATGGAAAGAAGATACCAGAAGGCTTGTGGGATGAGATACTTGAAGGCCTGGATTTTGTGGAGAATGA AATGAAGGCTGCTCTTGGGAATCCTTCCAAACCTCTCCTCGTCTCAGTGCGGTCTGGTGCTGCGGTATGCACGAACGATT TTATATTATATTTCTAACAAACTCAATATAGATAAACTCAAATAAGCTTGTACCCAAACATGCTCTTAGTGAGGCATATG TAAAAGGCCTATGAAAAATGGTATAATGTATGTACTATGGAAGGATTGGACTGCAAATGTTAAGTGATAAATTTTTCTGC ATGACTAGAAGTCGAGTTCAAGCATCTTTGGATCAATTTCTTTTTTCCCAGAGTTAATTCTAGACTTAAGTTTCTCACCA GAATTGATTCTGGTTTTAGAATCAATTGTTATGTATTTTAACATTGCCTTTAGTTTCCATTTATCAAACAACCATGCAAG AAAATTGTACTACTGTGATAGCTTGATGCAACTAAAATTAGGATTTCAATCCAAGTTTTAGCTTCAAAGTTATTGATATG AACCATTAATAACATTTGCTTTTTATCTAAACAATAAATTAGTTTATGCTACTTGTTATGAACATGATTTGCTCTGGCTA TTGAAATGTTCTACTGTATTTAAAAGGTGTGCTTTACTTTGATTTGAATTTGATTCCTCTTTTTGAGGGGCTTAACATGT TTATAGCACAAACTTACTTGTTTCCTATTTGTTTACAAGATATCCATGCCTGGAATGATGGACACAGTTCTCAATCTTGG ATTGAATGATGAAGTGGTTGCTGGGTTGGCTGCGAAAAGTGGGGAGCGGTTTGCTTACGATTCTTTTAGACGTTTCATAG ACATGTTTGGAGGCGTTGTAAGTGGATCTTTTACACCCTTAATGAACTCAATCTGTTAGTGTCTTTCATTGCTCTAACTG ATCTTTATATTATCTTAAGGTAATGGACATTCCACACTCGTTGTTTGAGGAGAAGTTAGAAAAGCTCAAGAATTCAAAAG GTGTTAAACTCGACACTGATCTAACAGCCACTGATCTCAAAAATCTGGTTGAGCAGTACAAGAATGTCTACTTTGAAGCT AAGGGAGAGAAGTTTCCCTCAGGTTCTGAGTGCAACACCATCAACTTCTTCCTGTTTTGTTGTTATTCATGTGAGGAAGT AAAAAGAAAATGCTCATCTTCCTTGTTGAATTACCAATTGCAGATCCAAAGAAGCAGCTAGAGTTAGCTGTTAAAGCTGT TTTTAACTCTTGGGATAGCCCAAGGGCTATTAAGTACCGAAGCATTAATCAGATAACAGGGCTAATGGGAACTGCAGTGA ACATTCAATCCATGGTATTTGGTAATATGGGGAATACTTCCGGAACTGGTGTTCTATTCACTAGAAATCCAAGCACTGGG GAAAATAAACTTTATGGAGAGTTTCTGATCAATGCTCAGGTTGCATATCATATCCTAGTTATTCTTATACTTTCATACCA TTATTATCTTTACTAGTTTTGGTGTTGATGTTTATTCTAAATTATTTTTAATAGGGAGAGGATGTAGTTGCTGGAATCAG AACACCTCAAGATTTGGAGACCATGAGAACTTGCATGCCAGAAGCTTACAAGGAACTTGTGGAGAACTGTGAAATTCTAG AGAAACATTACAAGGATATGATGGTGAAATTTCAACCCGTTATATATATTTTCTATTTGACTAGAGATATAGATAAATGA TTTCAATAGAGCAATGCTCATGTCACGTATGAGCTAGCTTTTGGCTTAGAGGTATGTCTAACCTGAATTCTAAGAATGCC GAAAGGTAAAGCTTCTGATATTGCTATTTTATTATTGTAGGATATTGAGTTCACTGTTCAAGAAAACAGGCTGTGGATGT TGCAATGTAGAACTGGAAAGCGTACCGGTAAAGGTGCAGTGAAAATAGCTGTAGATATGGTTAAGGAGGGACTTGTTGAT ACTCGTTCCGCCATCAAGATGGTAGAGCCACAACATCTGGATCAGCTACTTCACCCACAGGTACATACTTTGTGCTGAAG TTGCCATTTTCCATAGATGAGGGCGCCTTCAACTTCCTGTTATAATTGATCAAAACAACTTTGAAACATCAAATTAAATT TCCATATTCAAATGTAAGATACTAAAGTGTTCTTGATTGCCTTATGTTTATTTTGTTAGTTTGAGGATCCATCTACTTAC AAGGACAAAGTGATTGCCACTGGCTTGCCTGCATCCCCTGGAGCTGCAATAGGGCAAGTTGTGTTCACAGCTCATGATGC TGAAGAATGGCACGCACAAGGAAAAAATGCCATCTTGGTATTCCTTTTTATTATCAAGCAACAAATTTTATTTTCTCTTC TGTGTTCCCCTTCTTGATATAAGCTTGAACCTACCAATTTAGCTTTAGATAGGAAAATCTAGAGGTGCATTAGTGAAAAT ACTCACTTTTACAAGATTTTATGGTTAGGATGCAAATGCTGTCTTAACTTAGTTTCATGGTTAGGTTAAACAAACCATCC ACTAAGCATGTTTGGATTCACATTTAAATCTTCAAGAATCATTTCTAAGCTACCAGGAGTAGCTCTCCTAGATTTAATTT TCCTTCCAGCGTAAAAATCTACCATGTACCAAACTGGCGCATTAGAAATCATTAAATGCTAATCCATTATTGCATTATTG AAGGTGAGGACAGAGACAAGTCCAGAGGACATTGGGGGTATGCATGCAGCTGCTGGAATTTTGACAGCTAGAGGTGGTAT GACTTCTCATGCTGCTGTCGTAGCGCGTGGATGGGGAAAGTGTTGTGTTTCTGGCTGCTCTGATATCCAAGTAAATGATG TTGAGAAGGTAACTCCAGAATTTTTGTTAGCAATGAAGACATGTCTGTAAGAGTAAATACCCAAAATTGTTCACAAGAAA TTTAACAGTTCTACACTTAGTTCCTGATAATGAAAAAATTCCACTATAGTCCCTAAAAATCCCAAACATTAGCCATATTA GTCATTCTGAGGACCAATATGTATAATGTCTTGAAACTAATATGATTGACATTTCGTGATTTAAAGGATTAGGATTAATT TTTTGAGTCCTCATGGACTAATGTGTCTGCTGCCAAATGTTTCAGTCTTTCAGAGACAAATTTGGAGATTTACTCTATTT GGTGAAAGATCTTCATGTTCTTAGTAACTAAGTATAATCTCAATTGATAATGATAATGCAGGTGGTTGTAATCGGGGGTA AGATGATAACGGAAGGCGATTGGCTCTCGCTGAATGGATCCACAGGTGAGGTGATACTGGGAAAGCAAGCACTTTCTCCT CCTGCTCTAAGTGAAGATTTGGAAACTTTCATGTCTTGGGCTGATGAAATAAGAAATCTGAAGGTGCTTCATATTCTTTA TTTCAACAGAATTTGAGTTGAATCGAAGTATCTTCACTAATATCATTGTTGTCTACCAGGTTTTGGCAAATGCTGACACA CCTGAAGATGCTCTAGCTGCAAGAAAAAATGGTGCACAAGGGATTGGACTTTGCAGGACAGAACACATGGTACAAATAAA TATTCAACTCTTGCTAGAACTAAATGAAAGCATGAATTTATTACTCTTGAATTAATTGACACGGAGTAGCTACAAATTAT TTGTTGCATGTTTTGGTGTGTTTTAGTTTTTTGCTTCAGATGAAAGGATAAAGGCTGTGAGAAGGATGATAATGGCCGTT ACGCCGGAGCAGAGGAAAGCTGCACTAGACTTGTTGCTACCATATCAGAGATCAGATTTTGAGGGAATCTTTCGTGCAAT GGATGGCCTCCCAGTGACAATCCGATTGTTAGATCCTCCACTTCATGAATTTCTTCCAGAAGGTGACTTGGAGCATATTG TGAGTGAACTAACTTCCCAAACAGGCATGAAAGAAGAAGAAATCTTCTCAAGGATTGAAAAACTATCAGAAGTGAATCCC ATGCTCGGTTTTCGTGGCTGCAGGTTTGTCCCCCTTCTTATGATGCTTCTCTTAGAAATATAATATAAAAATATTCAATT GTGGCTTCTGCAAACAGCTTAAGCTTTTGAGATCGTTGGTTCATGATATGGTATCAGCGCTTCTCTGACCAAGCGCTCTA GAGTACTATCTTTGTTGCCCTCATTATTGTAATTAAAAAAGTTGAGTCTCAACATAAGATAGATAGGTCCGTGCATAGTC CACGTTTGAAGCCTAATGAGCTCTCGTGTGTGGGGGCATGTTTGAATTATAATATAAAACTATTCATGCCTCTTCATCCA TATGTAATGCAAATCTGCAGTCACAAATGAAGCATCATGGCTCATAATATATTCAATTTATGGATCAATTAGTAAAATAA CAATTCCTTATATTTGACAATTGAAATTTTGTGAGCAGGCTAGGAATCTCATACCCAGAATTGACTGAGATGCAGGCCCG TGCAATTTTTCAGGCTGCTGTTTCAATAAGTAACCATGGTATTACAGTTCTTCCTGAGATCATGGTTCCACTTATCGGTA CACCTCAGGCATGGTCCTTTCCCTTTTTTATTCTCTTGTGTTATTCTTCCAATTGTTTCACATGTATGATGTATCATATA TGAAAAAAAATCCCTATGCTATACTTTGGAACATTATTTATCTTGCATTCCTTTTTCCTTAACGATGTATCTCTTGAAAT ATATAACATGAAGAACTACTTAGAGTTCTGACATTGATGAAACCCTTGTAAATATTATATAAGCCCAAATTTTGTTTGCA GGAATTAAGGCATCAAGTGAGCGTAATCAGAAATGTTGCTGAGAAAGTGTTCTCTGAGATGGGTTCCTCTCTAAGCTATA AGGTTGGAACTATGATTGAAGTTCCAAGAGCTGCGCTTGTTGCAGATGAGGTAAAACTTATATTGTTATATCTTGAAGAT TCACACTTTAACATATAATATGCTCGTTTTATCACCTTGAAACCAAGATTATCATTTGCTGCAACAACAGTTCCAAGGAC CATTTTGTCATCATCTTATTACTATACTTTCTAACTTTATAATCCATTTGTGTAGATTGCAAAGGAGGCAGAGTTCTTTT CATTTGGAACCAATGACCTTACTCAGATGACATTTGGATACAGTAGAGATGATGTTGGCAAATTTCTTCCTATATACCTA GCCAACGGGATTTTGCAGCATGATCCATTTGAGGTAAGTTTCTTAACGTACATTTTATGATTACATGAAGGATGGTTTCT GAGTTTGAGTTGTTGACAATACTTGCAGGTAATTGACCAGAAAGGTGTGGGTCAACTCATCAAACTTTGCACAGAAAAGG GTCGTGCCGCAAGACCAAAATTAAAGGTATAAAAGAGTAACTTACCAATTGAGATTTAAACCAACAAATTTCATTACTCA TATATTTATTCTTACTATGTGAAATTTTGTGATATAAACATCTGCTTCATTCATTACACCCCTGCAATTAATCTATTAAG TTGATTATCAGATTGGAGTATGTGGAGAGCATGGTGGGGAACCTTCTTCTGTTGCATTCTTTGCTCAACTTGGGCTTGAC TATGTATCATGTTCTCCTTTTAGGTAAAATTTTCAGTTCTACATTATCTGCAAAAGAAATATTAGTATTTTCAATTGTCA CACTGAAAAATCTGAGGACTCCTTTGCAGGGTTCCAATTGCTAGGCTAGCGGCAGCTCAAGTAGAAGTTTAAGAGACAAT GCAAATAA
CDS sequence (LotjaGi4g1v0348600.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGTCCTTGTTGGGAGGAAAAGGGGCCAACTTGGCAGAAATGGCAACCATTGGTTTATCTGTGCCCCCTGGACTCAC TATATCAACTGAAGCATGTCAAGAGTATCAAGATAATGGAAAGAAGATACCAGAAGGCTTGTGGGATGAGATACTTGAAG GCCTGGATTTTGTGGAGAATGAAATGAAGGCTGCTCTTGGGAATCCTTCCAAACCTCTCCTCGTCTCAGTGCGGTCTGGT GCTGCGATATCCATGCCTGGAATGATGGACACAGTTCTCAATCTTGGATTGAATGATGAAGTGGTTGCTGGGTTGGCTGC GAAAAGTGGGGAGCGGTTTGCTTACGATTCTTTTAGACGTTTCATAGACATGTTTGGAGGCGTTGTAATGGACATTCCAC ACTCGTTGTTTGAGGAGAAGTTAGAAAAGCTCAAGAATTCAAAAGGTGTTAAACTCGACACTGATCTAACAGCCACTGAT CTCAAAAATCTGGTTGAGCAGTACAAGAATGTCTACTTTGAAGCTAAGGGAGAGAAGTTTCCCTCAGATCCAAAGAAGCA GCTAGAGTTAGCTGTTAAAGCTGTTTTTAACTCTTGGGATAGCCCAAGGGCTATTAAGTACCGAAGCATTAATCAGATAA CAGGGCTAATGGGAACTGCAGTGAACATTCAATCCATGGTATTTGGTAATATGGGGAATACTTCCGGAACTGGTGTTCTA TTCACTAGAAATCCAAGCACTGGGGAAAATAAACTTTATGGAGAGTTTCTGATCAATGCTCAGGGAGAGGATGTAGTTGC TGGAATCAGAACACCTCAAGATTTGGAGACCATGAGAACTTGCATGCCAGAAGCTTACAAGGAACTTGTGGAGAACTGTG AAATTCTAGAGAAACATTACAAGGATATGATGGATATTGAGTTCACTGTTCAAGAAAACAGGCTGTGGATGTTGCAATGT AGAACTGGAAAGCGTACCGGTAAAGGTGCAGTGAAAATAGCTGTAGATATGGTTAAGGAGGGACTTGTTGATACTCGTTC CGCCATCAAGATGGTAGAGCCACAACATCTGGATCAGCTACTTCACCCACAGTTTGAGGATCCATCTACTTACAAGGACA AAGTGATTGCCACTGGCTTGCCTGCATCCCCTGGAGCTGCAATAGGGCAAGTTGTGTTCACAGCTCATGATGCTGAAGAA TGGCACGCACAAGGAAAAAATGCCATCTTGGTGAGGACAGAGACAAGTCCAGAGGACATTGGGGGTATGCATGCAGCTGC TGGAATTTTGACAGCTAGAGGTGGTATGACTTCTCATGCTGCTGTCGTAGCGCGTGGATGGGGAAAGTGTTGTGTTTCTG GCTGCTCTGATATCCAAGTAAATGATGTTGAGAAGGTGGTTGTAATCGGGGGTAAGATGATAACGGAAGGCGATTGGCTC TCGCTGAATGGATCCACAGGTGAGGTGATACTGGGAAAGCAAGCACTTTCTCCTCCTGCTCTAAGTGAAGATTTGGAAAC TTTCATGTCTTGGGCTGATGAAATAAGAAATCTGAAGGTTTTGGCAAATGCTGACACACCTGAAGATGCTCTAGCTGCAA GAAAAAATGGTGCACAAGGGATTGGACTTTGCAGGACAGAACACATGTTTTTTGCTTCAGATGAAAGGATAAAGGCTGTG AGAAGGATGATAATGGCCGTTACGCCGGAGCAGAGGAAAGCTGCACTAGACTTGTTGCTACCATATCAGAGATCAGATTT TGAGGGAATCTTTCGTGCAATGGATGGCCTCCCAGTGACAATCCGATTGTTAGATCCTCCACTTCATGAATTTCTTCCAG AAGGTGACTTGGAGCATATTGTGAGTGAACTAACTTCCCAAACAGGCATGAAAGAAGAAGAAATCTTCTCAAGGATTGAA AAACTATCAGAAGAATTAAGGCATCAAGTGAGCGTAATCAGAAATGTTGCTGAGAAAGTGTTCTCTGAGATGGGTTCCTC TCTAAGCTATAAGGTTGGAACTATGATTGAAGTTCCAAGAGCTGCGCTTGTTGCAGATGAGATTGCAAAGGAGGCAGAGT TCTTTTCATTTGGAACCAATGACCTTACTCAGATGACATTTGGATACAGTAGAGATGATGTTGGCAAATTTCTTCCTATA TACCTAGCCAACGGGATTTTGCAGCATGATCCATTTGAGGTAATTGACCAGAAAGGTGTGGGTCAACTCATCAAACTTTG CACAGAAAAGGGTCGTGCCGCAAGACCAAAATTAAAGATTGGAGTATGTGGAGAGCATGGTGGGGAACCTTCTTCTGTTG CATTCTTTGCTCAACTTGGGCTTGACTATGTATCATGTTCTCCTTTTAGGGTTCCAATTGCTAGGCTAGCGGCAGCTCAA GTAGAAGTTTAA
Protein sequence (LotjaGi4g1v0348600.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKSLLGGKGANLAEMATIGLSVPPGLTISTEACQEYQDNGKKIPEGLWDEILEGLDFVENEMKAALGNPSKPLLVSVRSG AAISMPGMMDTVLNLGLNDEVVAGLAAKSGERFAYDSFRRFIDMFGGVVMDIPHSLFEEKLEKLKNSKGVKLDTDLTATD LKNLVEQYKNVYFEAKGEKFPSDPKKQLELAVKAVFNSWDSPRAIKYRSINQITGLMGTAVNIQSMVFGNMGNTSGTGVL FTRNPSTGENKLYGEFLINAQGEDVVAGIRTPQDLETMRTCMPEAYKELVENCEILEKHYKDMMDIEFTVQENRLWMLQC RTGKRTGKGAVKIAVDMVKEGLVDTRSAIKMVEPQHLDQLLHPQFEDPSTYKDKVIATGLPASPGAAIGQVVFTAHDAEE WHAQGKNAILVRTETSPEDIGGMHAAAGILTARGGMTSHAAVVARGWGKCCVSGCSDIQVNDVEKVVVIGGKMITEGDWL SLNGSTGEVILGKQALSPPALSEDLETFMSWADEIRNLKVLANADTPEDALAARKNGAQGIGLCRTEHMFFASDERIKAV RRMIMAVTPEQRKAALDLLLPYQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGDLEHIVSELTSQTGMKEEEIFSRIE KLSEELRHQVSVIRNVAEKVFSEMGSSLSYKVGTMIEVPRAALVADEIAKEAEFFSFGTNDLTQMTFGYSRDDVGKFLPI YLANGILQHDPFEVIDQKGVGQLIKLCTEKGRAARPKLKIGVCGEHGGEPSSVAFFAQLGLDYVSCSPFRVPIARLAAAQ VEV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 644 | 644 | 0.0 | ||
| TIGRFAM | 1 | 644 | 644 | 0.0 | ||
| PANTHER | 1 | 644 | 644 | 0.0 | – | |
| SUPERFAMILY | 1 | 363 | 363 | 1.06E-139 | – | |
| PIRSF | 1 | 645 | 645 | 6.2E-301 | ||
| Gene3D | 1 | 227 | 227 | 5.9E-102 | ||
| Pfam | 3 | 275 | 273 | 9.8E-43 | ||
| Gene3D | 96 | 180 | 85 | 5.9E-102 | – | |
| Gene3D | 228 | 325 | 98 | 4.5E-42 | – | |
| Pfam | 285 | 340 | 56 | 3.9E-13 | ||
| Gene3D | 329 | 513 | 185 | 2.5E-81 | – | |
| Gene3D | 367 | 491 | 125 | 2.5E-81 | – | |
| SUPERFAMILY | 371 | 493 | 123 | 3.27E-38 | ||
| Pfam | 406 | 487 | 82 | 3.0E-26 | ||
| ProSitePatterns | 434 | 445 | 12 | - | ||
| Pfam | 501 | 616 | 116 | 7.3E-28 | ||
| SUPERFAMILY | 503 | 802 | 300 | 2.2E-97 | ||
| Gene3D | 516 | 644 | 129 | 5.8E-51 | ||
| PIRSF | 643 | 803 | 161 | 4.4E-81 | ||
| Pfam | 643 | 802 | 160 | 9.4E-50 | ||
| PANTHER | 644 | 801 | 158 | 0.0 | ||
| PANTHER | 644 | 801 | 158 | 0.0 | – | |
| Gene3D | 645 | 803 | 159 | 5.1E-74 | ||
| ProSitePatterns | 693 | 711 | 19 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Pyruvate metabolic process | The chemical reactions and pathways involving pyruvate, 2-oxopropanoate. | ||
| Molecular function | Kinase activity | Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule. | ||
| Biological process | Phosphorylation | The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide. | ||
| Molecular function | Transferase activity, transferring phosphorus-containing groups | Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor). | ||
| Molecular function | Pyruvate, phosphate dikinase activity | Catalysis of the reaction: ATP + phosphate + pyruvate = AMP + diphosphate + 2 H(+) + phosphoenolpyruvate. |
Expression pattern of LotjaGi4g1v0348600.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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