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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0348600 |
| Transcript ID | LotjaGi4g1v0348600.6 |
| Related isoforms 8 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pyruvate, phosphate dikinase; TAIR: AT4G15530.1 pyruvate orthophosphate dikinase; Swiss-Prot: sp|Q42910|PPDK_MESCR Pyruvate, phosphate dikinase, chloroplastic; TrEMBL-Plants: tr|A0A151STM8|A0A151STM8_CAJCA Pyruvate, phosphate dikinase; Found in the gene: LotjaGi4g1v0348600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:72734790..72740920) extracted from Lotus japonicus Gifu genome v1.2.
AGTAACTTAAGTATAAAGGAATTATGAAAGAAGAAGAAACTGAAGTGAATTTTTTTTCTCTGCTTTTGTTTAAACAGCGG GCATTCACTTTTGGCAAAGGTAAAAGTGAAGGAAACAAGGCCATGAAGTCCTTGGTAAGTATTCTTTATCTTGCTATACA TATGTTATTTTTCTGGCTGATGAAACACTAATGCATGTTATGTTAAGCAAAACTTGACTTGCTACTTTTAATGTAATGAT AAAAAAAATCCTTTGAATTGATGAACAATTGCATGTATGTTAATTATAGTTGGGAGGAAAAGGGGCCAACTTGGCAGAAA TGGCAACCATTGGTTTATCTGTGCCCCCTGGACTCACTATATCAACTGAAGCATGTCAAGAGTATCAAGATAATGGAAAG AAGATACCAGAAGGCTTGTGGGATGAGATACTTGAAGGCCTGGATTTTGTGGAGAATGAAATGAAGGCTGCTCTTGGGAA TCCTTCCAAACCTCTCCTCGTCTCAGTGCGGTCTGGTGCTGCGGTATGCACGAACGATTTTATATTATATTTCTAACAAA CTCAATATAGATAAACTCAAATAAGCTTGTACCCAAACATGCTCTTAGTGAGGCATATGTAAAAGGCCTATGAAAAATGG TATAATGTATGTACTATGGAAGGATTGGACTGCAAATGTTAAGTGATAAATTTTTCTGCATGACTAGAAGTCGAGTTCAA GCATCTTTGGATCAATTTCTTTTTTCCCAGAGTTAATTCTAGACTTAAGTTTCTCACCAGAATTGATTCTGGTTTTAGAA TCAATTGTTATGTATTTTAACATTGCCTTTAGTTTCCATTTATCAAACAACCATGCAAGAAAATTGTACTACTGTGATAG CTTGATGCAACTAAAATTAGGATTTCAATCCAAGTTTTAGCTTCAAAGTTATTGATATGAACCATTAATAACATTTGCTT TTTATCTAAACAATAAATTAGTTTATGCTACTTGTTATGAACATGATTTGCTCTGGCTATTGAAATGTTCTACTGTATTT AAAAGGTGTGCTTTACTTTGATTTGAATTTGATTCCTCTTTTTGAGGGGCTTAACATGTTTATAGCACAAACTTACTTGT TTCCTATTTGTTTACAAGATATCCATGCCTGGAATGATGGACACAGTTCTCAATCTTGGATTGAATGATGAAGTGGTTGC TGGGTTGGCTGCGAAAAGTGGGGAGCGGTTTGCTTACGATTCTTTTAGACGTTTCATAGACATGTTTGGAGGCGTTGTAA GTGGATCTTTTACACCCTTAATGAACTCAATCTGTTAGTGTCTTTCATTGCTCTAACTGATCTTTATATTATCTTAAGGT AATGGACATTCCACACTCGTTGTTTGAGGAGAAGTTAGAAAAGCTCAAGAATTCAAAAGGTGTTAAACTCGACACTGATC TAACAGCCACTGATCTCAAAAATCTGGTTGAGCAGTACAAGAATGTCTACTTTGAAGCTAAGGGAGAGAAGTTTCCCTCA GGTTCTGAGTGCAACACCATCAACTTCTTCCTGTTTTGTTGTTATTCATGTGAGGAAGTAAAAAGAAAATGCTCATCTTC CTTGTTGAATTACCAATTGCAGATCCAAAGAAGCAGCTAGAGTTAGCTGTTAAAGCTGTTTTTAACTCTTGGGATAGCCC AAGGGCTATTAAGTACCGAAGCATTAATCAGATAACAGGGCTAATGGGAACTGCAGTGAACATTCAATCCATGGTATTTG GTAATATGGGGAATACTTCCGGAACTGGTGTTCTATTCACTAGAAATCCAAGCACTGGGGAAAATAAACTTTATGGAGAG TTTCTGATCAATGCTCAGGTTGCATATCATATCCTAGTTATTCTTATACTTTCATACCATTATTATCTTTACTAGTTTTG GTGTTGATGTTTATTCTAAATTATTTTTAATAGGGAGAGGATGTAGTTGCTGGAATCAGAACACCTCAAGATTTGGAGAC CATGAGAACTTGCATGCCAGAAGCTTACAAGGAACTTGTGGAGAACTGTGAAATTCTAGAGAAACATTACAAGGATATGA TGGTGAAATTTCAACCCGTTATATATATTTTCTATTTGACTAGAGATATAGATAAATGATTTCAATAGAGCAATGCTCAT GTCACGTATGAGCTAGCTTTTGGCTTAGAGGTATGTCTAACCTGAATTCTAAGAATGCCGAAAGGTAAAGCTTCTGATAT TGCTATTTTATTATTGTAGGATATTGAGTTCACTGTTCAAGAAAACAGGCTGTGGATGTTGCAATGTAGAACTGGAAAGC GTACCGGTAAAGGTGCAGTGAAAATAGCTGTAGATATGGTTAAGGAGGGACTTGTTGATACTCGTTCCGCCATCAAGATG GTAGAGCCACAACATCTGGATCAGCTACTTCACCCACAGGTACATACTTTGTGCTGAAGTTGCCATTTTCCATAGATGAG GGCGCCTTCAACTTCCTGTTATAATTGATCAAAACAACTTTGAAACATCAAATTAAATTTCCATATTCAAATGTAAGATA CTAAAGTGTTCTTGATTGCCTTATGTTTATTTTGTTAGTTTGAGGATCCATCTACTTACAAGGACAAAGTGATTGCCACT GGCTTGCCTGCATCCCCTGGAGCTGCAATAGGGCAAGTTGTGTTCACAGCTCATGATGCTGAAGAATGGCACGCACAAGG AAAAAATGCCATCTTGGTATTCCTTTTTATTATCAAGCAACAAATTTTATTTTCTCTTCTGTGTTCCCCTTCTTGATATA AGCTTGAACCTACCAATTTAGCTTTAGATAGGAAAATCTAGAGGTGCATTAGTGAAAATACTCACTTTTACAAGATTTTA TGGTTAGGATGCAAATGCTGTCTTAACTTAGTTTCATGGTTAGGTTAAACAAACCATCCACTAAGCATGTTTGGATTCAC ATTTAAATCTTCAAGAATCATTTCTAAGCTACCAGGAGTAGCTCTCCTAGATTTAATTTTCCTTCCAGCGTAAAAATCTA CCATGTACCAAACTGGCGCATTAGAAATCATTAAATGCTAATCCATTATTGCATTATTGAAGGTGAGGACAGAGACAAGT CCAGAGGACATTGGGGGTATGCATGCAGCTGCTGGAATTTTGACAGCTAGAGGTGGTATGACTTCTCATGCTGCTGTCGT AGCGCGTGGATGGGGAAAGTGTTGTGTTTCTGGCTGCTCTGATATCCAAGTAAATGATGTTGAGAAGGTAACTCCAGAAT TTTTGTTAGCAATGAAGACATGTCTGTAAGAGTAAATACCCAAAATTGTTCACAAGAAATTTAACAGTTCTACACTTAGT TCCTGATAATGAAAAAATTCCACTATAGTCCCTAAAAATCCCAAACATTAGCCATATTAGTCATTCTGAGGACCAATATG TATAATGTCTTGAAACTAATATGATTGACATTTCGTGATTTAAAGGATTAGGATTAATTTTTTGAGTCCTCATGGACTAA TGTGTCTGCTGCCAAATGTTTCAGTCTTTCAGAGACAAATTTGGAGATTTACTCTATTTGGTGAAAGATCTTCATGTTCT TAGTAACTAAGTATAATCTCAATTGATAATGATAATGCAGGTGGTTGTAATCGGGGGTAAGATGATAACGGAAGGCGATT GGCTCTCGCTGAATGGATCCACAGGTGAGGTGATACTGGGAAAGCAAGCACTTTCTCCTCCTGCTCTAAGTGAAGATTTG GAAACTTTCATGTCTTGGGCTGATGAAATAAGAAATCTGAAGGTGCTTCATATTCTTTATTTCAACAGAATTTGAGTTGA ATCGAAGTATCTTCACTAATATCATTGTTGTCTACCAGGTTTTGGCAAATGCTGACACACCTGAAGATGCTCTAGCTGCA AGAAAAAATGGTGCACAAGGGATTGGACTTTGCAGGACAGAACACATGGTACAAATAAATATTCAACTCTTGCTAGAACT AAATGAAAGCATGAATTTATTACTCTTGAATTAATTGACACGGAGTAGCTACAAATTATTTGTTGCATGTTTTGGTGTGT TTTAGTTTTTTGCTTCAGATGAAAGGATAAAGGCTGTGAGAAGGATGATAATGGCCGTTACGCCGGAGCAGAGGAAAGCT GCACTAGACTTGTTGCTACCATATCAGAGATCAGATTTTGAGGGAATCTTTCGTGCAATGGATGGCCTCCCAGTGACAAT CCGATTGTTAGATCCTCCACTTCATGAATTTCTTCCAGAAGGTGACTTGGAGCATATTGTGAGTGAACTAACTTCCCAAA CAGGCATGAAAGAAGAAGAAATCTTCTCAAGGATTGAAAAACTATCAGAAGTGAATCCCATGCTCGGTTTTCGTGGCTGC AGGTTTGTCCCCCTTCTTATGATGCTTCTCTTAGAAATATAATATAAAAATATTCAATTGTGGCTTCTGCAAACAGCTTA AGCTTTTGAGATCGTTGGTTCATGATATGGTATCAGCGCTTCTCTGACCAAGCGCTCTAGAGTACTATCTTTGTTGCCCT CATTATTGTAATTAAAAAAGTTGAGTCTCAACATAAGATAGATAGGTCCGTGCATAGTCCACGTTTGAAGCCTAATGAGC TCTCGTGTGTGGGGGCATGTTTGAATTATAATATAAAACTATTCATGCCTCTTCATCCATATGTAATGCAAATCTGCAGT CACAAATGAAGCATCATGGCTCATAATATATTCAATTTATGGATCAATTAGTAAAATAACAATTCCTTATATTTGACAAT TGAAATTTTGTGAGCAGGCTAGGAATCTCATACCCAGAATTGACTGAGATGCAGGCCCGTGCAATTTTTCAGGCTGCTGT TTCAATAAGTAACCATGGTATTACAGTTCTTCCTGAGATCATGGTTCCACTTATCGGTACACCTCAGGCATGGTCCTTTC CCTTTTTTATTCTCTTGTGTTATTCTTCCAATTGTTTCACATGTATGATGTATCATATATGAAAAAAAATCCCTATGCTA TACTTTGGAACATTATTTATCTTGCATTCCTTTTTCCTTAACGATGTATCTCTTGAAATATATAACATGAAGAACTACTT AGAGTTCTGACATTGATGAAACCCTTGTAAATATTATATAAGCCCAAATTTTGTTTGCAGGAATTAAGGCATCAAGTGAG CGTAATCAGAAATGTTGCTGAGAAAGTGTTCTCTGAGATGGGTTCCTCTCTAAGCTATAAGGTTGGAACTATGATTGAAG TTCCAAGAGCTGCGCTTGTTGCAGATGAGGTAAAACTTATATTGTTATATCTTGAAGATTCACACTTTAACATATAATAT GCTCGTTTTATCACCTTGAAACCAAGATTATCATTTGCTGCAACAACAGTTCCAAGGACCATTTTGTCATCATCTTATTA CTATACTTTCTAACTTTATAATCCATTTGTGTAGATTGCAAAGGAGGCAGAGTTCTTTTCATTTGGAACCAATGACCTTA CTCAGATGACATTTGGATACAGTAGAGATGATGTTGGCAAATTTCTTCCTATATACCTAGCCAACGGGATTTTGCAGCAT GATCCATTTGAGGTAAGTTTCTTAACGTACATTTTATGATTACATGAAGGATGGTTTCTGAGTTTGAGTTGTTGACAATA CTTGCAGGTAATTGACCAGAAAGGTGTGGGTCAACTCATCAAACTTTGCACAGAAAAGGGTCGTGCCGCAAGACCAAAAT TAAAGGTATAAAAGAGTAACTTACCAATTGAGATTTAAACCAACAAATTTCATTACTCATATATTTATTCTTACTATGTG AAATTTTGTGATATAAACATCTGCTTCATTCATTACACCCCTGCAATTAATCTATTAAGTTGATTATCAGATTGGAGTAT GTGGAGAGCATGGTGGGGAACCTTCTTCTGTTGCATTCTTTGCTCAACTTGGGCTTGACTATGTATCATGTTCTCCTTTT AGGTAAAATTTTCAGTTCTACATTATCTGCAAAAGAAATATTAGTATTTTCAATTGTCACACTGAAAAATCTGAGGACTC CTTTGCAGGGTTCCAATTGCTAGGCTAGCGGCAGCTCAAGTAGAAGTTTAA
CDS sequence (LotjaGi4g1v0348600.6) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACATTCCACACTCGTTGTTTGAGGAGAAGTTAGAAAAGCTCAAGAATTCAAAAGGTGTTAAACTCGACACTGATCT AACAGCCACTGATCTCAAAAATCTGGTTGAGCAGTACAAGAATGTCTACTTTGAAGCTAAGGGAGAGAAGTTTCCCTCAG ATCCAAAGAAGCAGCTAGAGTTAGCTGTTAAAGCTGTTTTTAACTCTTGGGATAGCCCAAGGGCTATTAAGTACCGAAGC ATTAATCAGATAACAGGGCTAATGGGAACTGCAGTGAACATTCAATCCATGGTATTTGGTAATATGGGGAATACTTCCGG AACTGGTGTTCTATTCACTAGAAATCCAAGCACTGGGGAAAATAAACTTTATGGAGAGTTTCTGATCAATGCTCAGGGAG AGGATGTAGTTGCTGGAATCAGAACACCTCAAGATTTGGAGACCATGAGAACTTGCATGCCAGAAGCTTACAAGGAACTT GTGGAGAACTGTGAAATTCTAGAGAAACATTACAAGGATATGATGGATATTGAGTTCACTGTTCAAGAAAACAGGCTGTG GATGTTGCAATGTAGAACTGGAAAGCGTACCGGTAAAGGTGCAGTGAAAATAGCTGTAGATATGGTTAAGGAGGGACTTG TTGATACTCGTTCCGCCATCAAGATGGTAGAGCCACAACATCTGGATCAGCTACTTCACCCACAGTTTGAGGATCCATCT ACTTACAAGGACAAAGTGATTGCCACTGGCTTGCCTGCATCCCCTGGAGCTGCAATAGGGCAAGTTGTGTTCACAGCTCA TGATGCTGAAGAATGGCACGCACAAGGAAAAAATGCCATCTTGGTGAGGACAGAGACAAGTCCAGAGGACATTGGGGGTA TGCATGCAGCTGCTGGAATTTTGACAGCTAGAGGTGGTATGACTTCTCATGCTGCTGTCGTAGCGCGTGGATGGGGAAAG TGTTGTGTTTCTGGCTGCTCTGATATCCAAGTAAATGATGTTGAGAAGGTGGTTGTAATCGGGGGTAAGATGATAACGGA AGGCGATTGGCTCTCGCTGAATGGATCCACAGGTGAGGTGATACTGGGAAAGCAAGCACTTTCTCCTCCTGCTCTAAGTG AAGATTTGGAAACTTTCATGTCTTGGGCTGATGAAATAAGAAATCTGAAGGTTTTGGCAAATGCTGACACACCTGAAGAT GCTCTAGCTGCAAGAAAAAATGGTGCACAAGGGATTGGACTTTGCAGGACAGAACACATGTTTTTTGCTTCAGATGAAAG GATAAAGGCTGTGAGAAGGATGATAATGGCCGTTACGCCGGAGCAGAGGAAAGCTGCACTAGACTTGTTGCTACCATATC AGAGATCAGATTTTGAGGGAATCTTTCGTGCAATGGATGGCCTCCCAGTGACAATCCGATTGTTAGATCCTCCACTTCAT GAATTTCTTCCAGAAGGTGACTTGGAGCATATTGTGAGTGAACTAACTTCCCAAACAGGCATGAAAGAAGAAGAAATCTT CTCAAGGATTGAAAAACTATCAGAAGTGAATCCCATGCTCGGTTTTCGTGGCTGCAGGCTAGGAATCTCATACCCAGAAT TGACTGAGATGCAGGCCCGTGCAATTTTTCAGGCTGCTGTTTCAATAAGTAACCATGGTATTACAGTTCTTCCTGAGATC ATGGAATTAAGGCATCAAGTGAGCGTAATCAGAAATGTTGCTGAGAAAGTGTTCTCTGAGATGGGTTCCTCTCTAAGCTA TAAGGTTGGAACTATGATTGAAGTTCCAAGAGCTGCGCTTGTTGCAGATGAGATTGCAAAGGAGGCAGAGTTCTTTTCAT TTGGAACCAATGACCTTACTCAGATGACATTTGGATACAGTAGAGATGATGTTGGCAAATTTCTTCCTATATACCTAGCC AACGGGATTTTGCAGCATGATCCATTTGAGGTAATTGACCAGAAAGGTGTGGGTCAACTCATCAAACTTTGCACAGAAAA GGGTCGTGCCGCAAGACCAAAATTAAAGATTGGAGTATGTGGAGAGCATGGTGGGGAACCTTCTTCTGTTGCATTCTTTG CTCAACTTGGGCTTGACTATGTATCATGTTCTCCTTTTAGATTGTCACACTGA
Protein sequence (LotjaGi4g1v0348600.6) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDIPHSLFEEKLEKLKNSKGVKLDTDLTATDLKNLVEQYKNVYFEAKGEKFPSDPKKQLELAVKAVFNSWDSPRAIKYRS INQITGLMGTAVNIQSMVFGNMGNTSGTGVLFTRNPSTGENKLYGEFLINAQGEDVVAGIRTPQDLETMRTCMPEAYKEL VENCEILEKHYKDMMDIEFTVQENRLWMLQCRTGKRTGKGAVKIAVDMVKEGLVDTRSAIKMVEPQHLDQLLHPQFEDPS TYKDKVIATGLPASPGAAIGQVVFTAHDAEEWHAQGKNAILVRTETSPEDIGGMHAAAGILTARGGMTSHAAVVARGWGK CCVSGCSDIQVNDVEKVVVIGGKMITEGDWLSLNGSTGEVILGKQALSPPALSEDLETFMSWADEIRNLKVLANADTPED ALAARKNGAQGIGLCRTEHMFFASDERIKAVRRMIMAVTPEQRKAALDLLLPYQRSDFEGIFRAMDGLPVTIRLLDPPLH EFLPEGDLEHIVSELTSQTGMKEEEIFSRIEKLSEVNPMLGFRGCRLGISYPELTEMQARAIFQAAVSISNHGITVLPEI MELRHQVSVIRNVAEKVFSEMGSSLSYKVGTMIEVPRAALVADEIAKEAEFFSFGTNDLTQMTFGYSRDDVGKFLPIYLA NGILQHDPFEVIDQKGVGQLIKLCTEKGRAARPKLKIGVCGEHGGEPSSVAFFAQLGLDYVSCSPFRLSH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 708 | 708 | 0.0 | ||
| SUPERFAMILY | 1 | 234 | 234 | 1.53E-84 | – | |
| TIGRFAM | 1 | 708 | 708 | 0.0 | ||
| Gene3D | 1 | 51 | 51 | 2.4E-34 | – | |
| PANTHER | 1 | 708 | 708 | 0.0 | – | |
| Pfam | 33 | 146 | 114 | 6.0E-22 | ||
| Gene3D | 52 | 98 | 47 | 2.4E-34 | ||
| Gene3D | 99 | 196 | 98 | 3.8E-42 | – | |
| Pfam | 156 | 211 | 56 | 3.3E-13 | ||
| Gene3D | 200 | 384 | 185 | 2.0E-81 | – | |
| Gene3D | 238 | 362 | 125 | 2.0E-81 | – | |
| SUPERFAMILY | 242 | 364 | 123 | 2.75E-38 | ||
| Pfam | 277 | 358 | 82 | 2.5E-26 | ||
| ProSitePatterns | 305 | 316 | 12 | - | ||
| Pfam | 372 | 708 | 337 | 8.7E-96 | ||
| SUPERFAMILY | 374 | 708 | 335 | 3.69E-116 | ||
| Gene3D | 387 | 710 | 324 | 2.0E-147 | ||
| ProSitePatterns | 610 | 628 | 19 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Pyruvate metabolic process | The chemical reactions and pathways involving pyruvate, 2-oxopropanoate. | ||
| Molecular function | Kinase activity | Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule. | ||
| Biological process | Phosphorylation | The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide. | ||
| Molecular function | Transferase activity, transferring phosphorus-containing groups | Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor). | ||
| Molecular function | Pyruvate, phosphate dikinase activity | Catalysis of the reaction: ATP + phosphate + pyruvate = AMP + diphosphate + 2 H(+) + phosphoenolpyruvate. |
Expression pattern of LotjaGi4g1v0348600.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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