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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0368700 |
| Transcript ID | LotjaGi4g1v0368700.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pentatricopeptide repeat-containing protein; TAIR: AT5G27270.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|O04647|PP399_ARATH Pentatricopeptide repeat-containing protein At5g27270; TrEMBL-Plants: tr|I1KS45|I1KS45_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0368700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:74841762..74848660) extracted from Lotus japonicus Gifu genome v1.2.
AAGGGTCACGTGCTTCCCTCTCTCCTCATACCTCCTTTCTCTCTCCAACTAGACGTCCACGTAAACCTCCTCCATTAAGA AATAAACGGTAGGACAATCGTTGCACACGGCCTACAATGTCGGGGACTATCCATGTAATTAAATTAGGTGGGGGACCAAA ATCGTGGCATTGGTAAACGTCGGGAACTAAAGTTGCAATTAAGCCATAATTTTATGGAAAAAAATATCGTGCTTCTTCGT CGAGTCGTCGTTACCACTTACCAGAGACCAATATCCACATTTCTTCTACTGGAATAAGTGGGGCACTGAAGCTCCAAAAC AAAAACAATGGAGTCTCTGAAATCCCCCTTCATCTTCTCCACTCCCCTCCTTCCTCCACCTTCACAACTCCATTCCCTTC TTCTTCTCAACAACAACAACAACAACAAACCCATTCCCACTCGCATTCACTCCTCTTCAGTCCAACGCGACCCATGGTCC CTCCGAGACGGCGACCCCACCAAACCAAAACCGAAGTCCCTCAACCCCAAGAAGTCACTCTCCGACAACAACGCCCGCCG CATCATCAAGGCCAAGGCCCAGTACCTCAGTGTTCTGCGGCGGAACCAGGGTCCGCAAGCTCAGACTCCTCGCTGGGTCA AGCGGACCCCTGAGCAGATGGTTCAGTACTTGCAGGACGACCGTAACGGCCAGCTCTATGGGAAGCATGTGGTGGCTGCG ATTAAGAAAGTGCGTGCGCTCTCTCAGAAGCTTGATGGAGACTATGATATGAGAATGGTGATGGGTTCGTTTGTTGGTAA GCTCACGTTTAGAGAGATGTGTACTGTGCTCAAGGAGCAGAAGGGGTGGCGGCAAGTCAGAGATTTTTTTGCTTGGATGA AATTGCAGGTTTTTTAATTTTCCCTTCAACTTCATTGGGTTATGTTGTATTGTGTAAGTAAGTAAATAGCTTAATTAAGC ACTTATGTTAGGACATACTTATGGTAATAAGAGCTTATAGCATAATAACTTATTCATAAGTTAGTTTGATAAGTTTATTG AAATAAGCTCAAAATGGATTTGTGTAGACAAAAACACTTATTCATAAGTTAATCTTAGCAGTTTATGACAATAAGCTCAG AACAGGTTAGAGATAGGTCATAAACTATATATGTAAGCTCTCCTGGACACTTGCATATACACTTATTCTACAAAATAAGC TCTTTTAAACTGGGTTATTTGAGATAAGCATGTCATAAGCCATTTTCAAAAGCTTAACCAAACACCTGATATAACCTGAT GTTTAGAGAAGAATAAGAAATCTGAAATCATAATAAGAGAGAGAAAAAAAGTGAAAGCGAAATAAAAGAAGAAAAGATTC CTGTGAAAATGTATAAAACGTGGTTAGTTAATTGCATCGTTTTATTTGGTTGTAAAATAGGGGGTGTGAATGGCCAATTG GCCATCTTAGTTTATTTTAGTGTTGTTGTTTTGCAGCAAAGTATAGAAATTGATACTGTTTATTGATAGTCTGGTGGTTC AACAGCTTAGCTACCATCCCAGTGTTATTGTCTACACGATAGTGTTGCGCCTGTATGGGCAAGTTGGGAAGCTGAATCTG GCTGAAGAGGTATTCTTGGAGATGCTTGATGTAGGTTGTGAACCTGATGAAGTTGCTTGTGGTACCATGCTTTGTTCATA TGCCAGATGGGGACGCCATAAGGCTATGTTGTCTTTCTATTCCGCTGTAAAAGAAAGGGGCATAACTCTTTCCGTTGCTG TATTCAACTTTATGTTATCATCTTTGCAAAAGAAATCACTCCATAAAGAGGTTGTACAGGTGTGGAAGGATATGGTAGGG AAAGGGGTGGTGCCTAATGAGTTTACTTATACAGTAGTCATTAGCTCACTTGTCAAGGAAGCGCTGCATGAAGATGCTTT CAGGACTTTTGATGAGATGAAGAATAATAGATTTGTCCCAGAAGAGGTAACTTATAGCATGCTTATAAATCTATATGCTA AAACTGGCAACAGAGATCAAGTGCAAAAATTGTATGATGATATGAGGTTTCGAGGAATAACTCCCAGTAATTACACTTGT GCTACACTTATATCATTGTATTACAGATACGAGGACTACCCTAGAGCCCTCTCTCTCTTTTCAGAAATGGTAAGCAACAA AGTTTCAGCTGATGAAGTCATATATGGTTTGCTTATAAGAATTTATGGAAAGCTTGGTTTATATGAGGATGCTTGCAAAA CCTTCGAAGAGACAAAGCAGTTAGGTCTACTCACCAATGAGAAAACGCATTTGGCAATGGCACAGGTTCATCTTACTTCG GGAAATGTAGACAAAGCTTTGGAAGTAATTGAACTCATGAAGTCTAGCAAACTATGGTTCTCTCGATTTGCTTACATTGT GCTTCTGCAGTGTTATGTGATGAAAGAAGATGTAAATTCTGCTGAAGGAGCATTTTTAGCTCTGTGCAAAACAGGAGTGC CTGATGCCGGTTCTTGCAATGATATGCTCAATCTTTATGTCAGACTTAATTTGATAAACAAGGCAAAGGATTTCATTGTC CGAATAAGGGAGGACAATACACATTTTGATGAGGAACTTTATAGGACAGCTATGCGATTTTACTGTAAGGAGGGAATGCT GCCAGAAGCTGAGCAGTTGACAAATCAAATGTTTAAGAATGAATATTTTAAAAATTCAAATTTGTTCCAGACATTTTATT GGATTCTCTGTAAATATAAAGGGGATGCACAATCTGATGATAAACTCGTGGCCATTGAGCCCATGGACAAATTTGACACT ACAGCTCTTGGGATGATGCTCAATTTATTTCTGACAAATGACAGTTTCAGCAAGATAAAAACATTATTGAAACTACTGCT GAGTTCTGCTTGGGGGACAAAAGTTGTCAGTCAGTTCATCACCAACTTGACTACAAATGGTATATCTCTTCTACAAAATT GATCATGCCTCTTTTTCTGATGTCTTTTTTAAATTCCCATTTTCAACTTAGATTTATCTCTTTTTCAGGAGAAATCAGTA AAGCAGAATTGATCAACCATCAATTAATTAAGCTTGGCTCCAGAATGGATGAAGCCACTGTAGCTACTCTAATTAGTCAG TACGGCAAGCAACACATGCTGAAACAAGCTGAAGATATCTTTGCAGAATATGTAAATTTGCCTACATCTAGTAAACTACT GTATAACTCTATGATTGATGCATATGCCAAATGTGGCAAACAAGAGAAAGCCTATAAGCTATACAAGCAAGCAACAGAGG AAGGAAATGATTTGGGCGCTGTTGGAATTAGCATCGTTGTAAATGCTTTGACCAAAGGAGGTATGGCCTTGGAAGAGCTA TGTAAACTAGAGTTTAATTCATATATCAACCAACCACATACTATATCCTGTCTTCTGATATAATTCTACCACTAAAATGA AATATGTTTGAAAAACTTGAATTAACTTGTGTTTTGCAACCTATAACTTGTTTGGTTCAGAAAGAACTGTACCTGTGTAT GTTTCACAGTATTGTGCAGTTCTTTTGGATAGGATTAAGCATTTGGCTTCAGATTTTTATAGTATAATTATCTGCATTGA TGACATAGATTTTTTTGTTGAAAACAGACATTGCTCTAGGTTTAAAAAAATCAGGAAGTTCCGGAGACATGATCATTTAT TCCTTTTTCTTTTCTTTTCAGCATACAGTTATGTAGCACTTACTTGATAATTTTATACCTAATTCATTTTCAGGAAAACA TAAGGAGGCTGAGAGTATTATCCGCCGGAGTCTTGAAGAAAGCCCGGAGCTTGACACTGTGGCTTACAATACCTTCATCA AATCCATGCTTGAAGCAGGTTGATACCGAGCATCTTTCTTGCATAGCAAAGATAAGATGAAGCACAGTATTGCTAATATA GTTTGTTCTGTGTTGTAGGAAAATTACATTTTGCATCTTGTATTTTTGAGCGCATGTATTCCTCTGGTGTTGCTTCATCA ATTCAAACATATAACACGATGATAAGGTTATAGTTTTGAATAGCTGTCTTTCTCTGTAAGAAGTTTTCATGTCTATCCTT TTGGTGGTTAATTTTTAGACCAATTGTTGAACTGCTGCAGTGTCTATGGACAAGATCAAAAGTTGGATAGAGCTGTAGAG ATGTTCAACAAAGCTCGCTCGTTGGATGTCCCGTTGGATGAAAAAGCATACATGAATTTGATTGGCTATTATGGAAAAGC TGGTACTGGGCCATTTTAACTCAAACGGATGTTGAATGTTGATAATTATAAAATACACTTGATCATATCAGAAATATTCC TAATTATTAGGAAAATGGTGAGTGTAATTTAGCTGTAATACATGTATATGTAAATGTTATAGTACATTAGCATGTGAATT AGTATATATTTATGTCACTTAAAAGGTAATGACTGGAGTCACTAGACTACAAATTTTTTCCATACAATTTCGGGGTAAAC GTAATATCACAAAGGCCTTTTGGCTCAAGTATGTGAGGTGAGTTTTCCCTATTGACATTGTAGGCTCACTCATTTAGTTG AGTTCTTTTTAACTAAAATGATTGAGTCCAAATTGTTTGAAATTTTTTTTGTCCAGCCATTACTTTTCTAGTAGCATACA TACATACTAATTTACATAATAACGTTCAATAACATCATACATATTATGTTAAACTATACTTACCATTTTCCTAATAATTA GAAACGAAAGTATTTTTTATTTGAGAAATTGTACTTGGATTTCTTATACCAAATATTTATTCCTGTCTAATATGATTTAT AAACAATGGAGAGTGCGAAGACAATGAGATCAGCACTTCGATTTCTAAAATCTCTATGATGATTGTTGATTGGCTCATTT GCTTGGTCGTGATTAATATCTTCTATGTATGATATCAAATTCTTAATTATTTATTTTGTAGGTATGTTGCAGGAAGCTTC ACATTTGTTCAGTGAAATGCAAGAAGGAGGGATAAAACCTGGAAAGGTAAAGTTTAAGATTTCTTAACTAATTCTCAAGA CAAGCAAGAGCATACCACTGGAATTTATTGGTGTTAGAAACATAATACAAAACTATTCATGGCAAAGATTGATGACATGG TATCAAAGCGAAGCCTTACAACAAAGTGGTCTAGTTTCTGGCGTTTGATTCTTGTTCCACTAATTTTTCAATAGAAAGTT AAATTTTATCATAAGGTACATGAGCCAATCCAAGTGTATGCTTTAAGTTTAAAGGACTCACATAAAGAGGGCGTGTTAAA AATGTTATTGAACCATTACTATGATTTCACATAATATGTTAAACTTATGCAAGTTGATTTTTGGCATGTCAAATTAATTT ATTTAAAAGCTTAAGCTCTGCTACAGCCTAAAATATCTGAAGCAGTTGTTCTTTCTTACATTTTTATGATCACTTTGCTC GATCAACCACATCTTCAAAAAAAATCAAATTTTTAGGATCCTTGTGTAACTTTATCTGTATTGCAGTTAGATTCAGTGAA TGATAATTTGTCACTTTGCTGATTCTGTTACATGACATTTTCAGCATTGCACAGCTAGGGATGCTTTGTAATTTATGCTC CTTGTAGTTTGTTTATTTCGAATAATACTGCTATAGTGTCTAAAGGCTTCTTACTTGTATTGGGGAATGCAGGTCAGCTA CAACATTATGATCAACGTATACGCCAATGCTGGAGTTCACCATGAAGTAGAGAAACTTTTCCAAGCCATGCAAAGACAAG GCTGTCTGCCTGACTCTTTCACTTATATTTCCCTTGTCAAAGCATATGCAGAGAGCGTAAATTACTCTAAAGCCGAGGAA ACCATACGTTCTATGCAGCGCAAAGGCATTTCACCATCTTGTGCCCATTTTAATATATTAATCTCCGCGCTCACGAAAGC TGGGCTGATTGATGAAGCCAAAAGGGTTTATGAGGAAATATCAACTTTTGGTTTGATTCCTGATCTCATATGTTACCGAA CAATGATGAAAGGTTACCTGGAACATGGATGCGTGGAAAAAGGAATCCACTTTTTTGAAAGTATACGCGAGTCAGCAAAA GGAGACAAGTTCATCATGAGTGCAGCTGTGCATTTTTACAAATCTGCGGGAAATGGAAGCCAAGCTGAAGAAATATTGCA TTCAATGAAGAACATGAGGATCCCATTCCTCAGGAAGCTTGAAGTTGGAACGGCAGAGAGAGTGATGACTACTTGAGAGT TGAGATATTAGTCATATAACATACTGCAGAAATGCATGTGTCCTTGATCAGCAATATGATGATCGAAAAGAGTTGGTTAT GATTATGGAACATGTATATAGTCTAATCAACCTGGTGATGGTGAAAGGCTGATAATAGCTGCTTCTGTTTGCTGGCAATG ACGATTGGACTCGGGGTTCAGAATGTGCTTCTGCCGGTAACGCGGAGCCCATTCTGGTTTGCTGCTGTGCATCTGAGTTG ATCACATATGAATATGTCAGAGAAATCTGTATACTCAATACTACCTTACTAAAGAAAGTTGCACCAAGGATAAACATGGG CCTTAGGATGACACATGACAGGTTTTCTGAGCATGCTAGTCAATATTTGTAGTTCATGACTGACTGTTAGTCCCCAGCAT TTTCTCAGGGCTAGACCATAACAGGTATAGGACTATCCCCCACATTTTGAGTTTACACTTTGCTTTGAATGATGTAAAGA ATGATAAATGAGATTCTTTCCCCAATTGTATTTGATCACTTAGTGGGAATAGCTTTTGCTGTTGTCTCCAAATTGTATTG ATATGGAAATTGCTATAGGGTGTTTCTGTTGATTGGGAGGCCAATACAGCAAGTATCATGTACAGGTGTTCCTTTATTTA CACAATTTCAATAAAATTA
CDS sequence (LotjaGi4g1v0368700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGTCTCTGAAATCCCCCTTCATCTTCTCCACTCCCCTCCTTCCTCCACCTTCACAACTCCATTCCCTTCTTCTTCT CAACAACAACAACAACAACAAACCCATTCCCACTCGCATTCACTCCTCTTCAGTCCAACGCGACCCATGGTCCCTCCGAG ACGGCGACCCCACCAAACCAAAACCGAAGTCCCTCAACCCCAAGAAGTCACTCTCCGACAACAACGCCCGCCGCATCATC AAGGCCAAGGCCCAGTACCTCAGTGTTCTGCGGCGGAACCAGGGTCCGCAAGCTCAGACTCCTCGCTGGGTCAAGCGGAC CCCTGAGCAGATGGTTCAGTACTTGCAGGACGACCGTAACGGCCAGCTCTATGGGAAGCATGTGGTGGCTGCGATTAAGA AAGTGCGTGCGCTCTCTCAGAAGCTTGATGGAGACTATGATATGAGAATGGTGATGGGTTCGTTTGTTGGTAAGCTCACG TTTAGAGAGATGTGTACTGTGCTCAAGGAGCAGAAGGGGTGGCGGCAAGTCAGAGATTTTTTTGCTTGGATGAAATTGCA GCTTAGCTACCATCCCAGTGTTATTGTCTACACGATAGTGTTGCGCCTGTATGGGCAAGTTGGGAAGCTGAATCTGGCTG AAGAGGTATTCTTGGAGATGCTTGATGTAGGTTGTGAACCTGATGAAGTTGCTTGTGGTACCATGCTTTGTTCATATGCC AGATGGGGACGCCATAAGGCTATGTTGTCTTTCTATTCCGCTGTAAAAGAAAGGGGCATAACTCTTTCCGTTGCTGTATT CAACTTTATGTTATCATCTTTGCAAAAGAAATCACTCCATAAAGAGGTTGTACAGGTGTGGAAGGATATGGTAGGGAAAG GGGTGGTGCCTAATGAGTTTACTTATACAGTAGTCATTAGCTCACTTGTCAAGGAAGCGCTGCATGAAGATGCTTTCAGG ACTTTTGATGAGATGAAGAATAATAGATTTGTCCCAGAAGAGGTAACTTATAGCATGCTTATAAATCTATATGCTAAAAC TGGCAACAGAGATCAAGTGCAAAAATTGTATGATGATATGAGGTTTCGAGGAATAACTCCCAGTAATTACACTTGTGCTA CACTTATATCATTGTATTACAGATACGAGGACTACCCTAGAGCCCTCTCTCTCTTTTCAGAAATGGTAAGCAACAAAGTT TCAGCTGATGAAGTCATATATGGTTTGCTTATAAGAATTTATGGAAAGCTTGGTTTATATGAGGATGCTTGCAAAACCTT CGAAGAGACAAAGCAGTTAGGTCTACTCACCAATGAGAAAACGCATTTGGCAATGGCACAGGTTCATCTTACTTCGGGAA ATGTAGACAAAGCTTTGGAAGTAATTGAACTCATGAAGTCTAGCAAACTATGGTTCTCTCGATTTGCTTACATTGTGCTT CTGCAGTGTTATGTGATGAAAGAAGATGTAAATTCTGCTGAAGGAGCATTTTTAGCTCTGTGCAAAACAGGAGTGCCTGA TGCCGGTTCTTGCAATGATATGCTCAATCTTTATGTCAGACTTAATTTGATAAACAAGGCAAAGGATTTCATTGTCCGAA TAAGGGAGGACAATACACATTTTGATGAGGAACTTTATAGGACAGCTATGCGATTTTACTGTAAGGAGGGAATGCTGCCA GAAGCTGAGCAGTTGACAAATCAAATGTTTAAGAATGAATATTTTAAAAATTCAAATTTGTTCCAGACATTTTATTGGAT TCTCTGTAAATATAAAGGGGATGCACAATCTGATGATAAACTCGTGGCCATTGAGCCCATGGACAAATTTGACACTACAG CTCTTGGGATGATGCTCAATTTATTTCTGACAAATGACAGTTTCAGCAAGATAAAAACATTATTGAAACTACTGCTGAGT TCTGCTTGGGGGACAAAAGTTGTCAGTCAGTTCATCACCAACTTGACTACAAATGGAGAAATCAGTAAAGCAGAATTGAT CAACCATCAATTAATTAAGCTTGGCTCCAGAATGGATGAAGCCACTGTAGCTACTCTAATTAGTCAGTACGGCAAGCAAC ACATGCTGAAACAAGCTGAAGATATCTTTGCAGAATATGTAAATTTGCCTACATCTAGTAAACTACTGTATAACTCTATG ATTGATGCATATGCCAAATGTGGCAAACAAGAGAAAGCCTATAAGCTATACAAGCAAGCAACAGAGGAAGGAAATGATTT GGGCGCTGTTGGAATTAGCATCGTTGTAAATGCTTTGACCAAAGGAGGAAAACATAAGGAGGCTGAGAGTATTATCCGCC GGAGTCTTGAAGAAAGCCCGGAGCTTGACACTGTGGCTTACAATACCTTCATCAAATCCATGCTTGAAGCAGGAAAATTA CATTTTGCATCTTGTATTTTTGAGCGCATGTATTCCTCTGGTGTTGCTTCATCAATTCAAACATATAACACGATGATAAG TGTCTATGGACAAGATCAAAAGTTGGATAGAGCTGTAGAGATGTTCAACAAAGCTCGCTCGTTGGATGTCCCGTTGGATG AAAAAGCATACATGAATTTGATTGGCTATTATGGAAAAGCTGGTATGTTGCAGGAAGCTTCACATTTGTTCAGTGAAATG CAAGAAGGAGGGATAAAACCTGGAAAGGTCAGCTACAACATTATGATCAACGTATACGCCAATGCTGGAGTTCACCATGA AGTAGAGAAACTTTTCCAAGCCATGCAAAGACAAGGCTGTCTGCCTGACTCTTTCACTTATATTTCCCTTGTCAAAGCAT ATGCAGAGAGCGTAAATTACTCTAAAGCCGAGGAAACCATACGTTCTATGCAGCGCAAAGGCATTTCACCATCTTGTGCC CATTTTAATATATTAATCTCCGCGCTCACGAAAGCTGGGCTGATTGATGAAGCCAAAAGGGTTTATGAGGAAATATCAAC TTTTGGTTTGATTCCTGATCTCATATGTTACCGAACAATGATGAAAGGTTACCTGGAACATGGATGCGTGGAAAAAGGAA TCCACTTTTTTGAAAGTATACGCGAGTCAGCAAAAGGAGACAAGTTCATCATGAGTGCAGCTGTGCATTTTTACAAATCT GCGGGAAATGGAAGCCAAGCTGAAGAAATATTGCATTCAATGAAGAACATGAGGATCCCATTCCTCAGGAAGCTTGAAGT TGGAACGGCAGAGAGAGTGATGACTACTTGA
Protein sequence (LotjaGi4g1v0368700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESLKSPFIFSTPLLPPPSQLHSLLLLNNNNNNKPIPTRIHSSSVQRDPWSLRDGDPTKPKPKSLNPKKSLSDNNARRII KAKAQYLSVLRRNQGPQAQTPRWVKRTPEQMVQYLQDDRNGQLYGKHVVAAIKKVRALSQKLDGDYDMRMVMGSFVGKLT FREMCTVLKEQKGWRQVRDFFAWMKLQLSYHPSVIVYTIVLRLYGQVGKLNLAEEVFLEMLDVGCEPDEVACGTMLCSYA RWGRHKAMLSFYSAVKERGITLSVAVFNFMLSSLQKKSLHKEVVQVWKDMVGKGVVPNEFTYTVVISSLVKEALHEDAFR TFDEMKNNRFVPEEVTYSMLINLYAKTGNRDQVQKLYDDMRFRGITPSNYTCATLISLYYRYEDYPRALSLFSEMVSNKV SADEVIYGLLIRIYGKLGLYEDACKTFEETKQLGLLTNEKTHLAMAQVHLTSGNVDKALEVIELMKSSKLWFSRFAYIVL LQCYVMKEDVNSAEGAFLALCKTGVPDAGSCNDMLNLYVRLNLINKAKDFIVRIREDNTHFDEELYRTAMRFYCKEGMLP EAEQLTNQMFKNEYFKNSNLFQTFYWILCKYKGDAQSDDKLVAIEPMDKFDTTALGMMLNLFLTNDSFSKIKTLLKLLLS SAWGTKVVSQFITNLTTNGEISKAELINHQLIKLGSRMDEATVATLISQYGKQHMLKQAEDIFAEYVNLPTSSKLLYNSM IDAYAKCGKQEKAYKLYKQATEEGNDLGAVGISIVVNALTKGGKHKEAESIIRRSLEESPELDTVAYNTFIKSMLEAGKL HFASCIFERMYSSGVASSIQTYNTMISVYGQDQKLDRAVEMFNKARSLDVPLDEKAYMNLIGYYGKAGMLQEASHLFSEM QEGGIKPGKVSYNIMINVYANAGVHHEVEKLFQAMQRQGCLPDSFTYISLVKAYAESVNYSKAEETIRSMQRKGISPSCA HFNILISALTKAGLIDEAKRVYEEISTFGLIPDLICYRTMMKGYLEHGCVEKGIHFFESIRESAKGDKFIMSAAVHFYKS AGNGSQAEEILHSMKNMRIPFLRKLEVGTAERVMTT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 35 | 74 | 40 | - | – | |
| MobiDBLite | 35 | 49 | 15 | - | – | |
| Gene3D | 127 | 278 | 152 | 1.9E-25 | ||
| PANTHER | 161 | 361 | 201 | 5.1E-134 | – | |
| Pfam | 192 | 240 | 49 | 2.6E-7 | ||
| ProSiteProfiles | 193 | 227 | 35 | 11.071 | ||
| TIGRFAM | 195 | 229 | 35 | 3.0E-7 | ||
| ProSiteProfiles | 228 | 262 | 35 | 8.616 | ||
| TIGRFAM | 230 | 263 | 34 | 0.0016 | ||
| ProSiteProfiles | 263 | 297 | 35 | 9.58 | ||
| Pfam | 263 | 311 | 49 | 6.3E-10 | ||
| TIGRFAM | 266 | 299 | 34 | 6.1E-4 | ||
| Gene3D | 279 | 381 | 103 | 8.0E-26 | ||
| ProSiteProfiles | 298 | 332 | 35 | 11.203 | ||
| TIGRFAM | 300 | 332 | 33 | 2.0E-6 | ||
| Pfam | 332 | 377 | 46 | 1.1E-9 | ||
| ProSiteProfiles | 333 | 367 | 35 | 11.575 | ||
| TIGRFAM | 335 | 368 | 34 | 2.3E-5 | ||
| SUPERFAMILY | 336 | 467 | 132 | 3.64E-6 | ||
| PANTHER | 351 | 520 | 170 | 5.1E-134 | – | |
| ProSiteProfiles | 368 | 402 | 35 | 8.517 | ||
| TIGRFAM | 370 | 403 | 34 | 0.001 | ||
| Gene3D | 382 | 494 | 113 | 2.4E-17 | ||
| ProSiteProfiles | 403 | 437 | 35 | 9.536 | ||
| Pfam | 405 | 434 | 30 | 0.0015 | ||
| ProSiteProfiles | 438 | 472 | 35 | 7.169 | ||
| Pfam | 445 | 468 | 24 | 1.1 | ||
| Gene3D | 495 | 640 | 146 | 2.6E-9 | ||
| PANTHER | 505 | 590 | 86 | 5.1E-134 | – | |
| ProSiteProfiles | 507 | 541 | 35 | 6.73 | ||
| ProSiteProfiles | 542 | 576 | 35 | 8.846 | ||
| Pfam | 546 | 572 | 27 | 0.079 | ||
| PANTHER | 648 | 887 | 240 | 5.1E-134 | – | |
| Gene3D | 662 | 798 | 137 | 1.2E-19 | ||
| ProSiteProfiles | 679 | 709 | 31 | 6.489 | ||
| SUPERFAMILY | 690 | 880 | 191 | 6.83E-10 | ||
| ProSiteProfiles | 713 | 747 | 35 | 10.358 | ||
| TIGRFAM | 717 | 744 | 28 | 7.1E-4 | ||
| Pfam | 717 | 744 | 28 | 1.9E-4 | ||
| ProSiteProfiles | 748 | 782 | 35 | 6.182 | ||
| Pfam | 783 | 826 | 44 | 8.6E-8 | ||
| ProSiteProfiles | 783 | 817 | 35 | 9.745 | ||
| TIGRFAM | 785 | 815 | 31 | 9.4E-4 | ||
| Gene3D | 799 | 905 | 107 | 4.5E-25 | ||
| ProSiteProfiles | 818 | 852 | 35 | 9.723 | ||
| TIGRFAM | 821 | 853 | 33 | 1.9E-5 | ||
| ProSiteProfiles | 853 | 887 | 35 | 11.729 | ||
| TIGRFAM | 857 | 887 | 31 | 1.9E-5 | ||
| Pfam | 857 | 885 | 29 | 2.9E-4 | ||
| PANTHER | 875 | 1057 | 183 | 5.1E-134 | – | |
| Pfam | 887 | 935 | 49 | 4.0E-12 | ||
| ProSiteProfiles | 888 | 922 | 35 | 11.466 | ||
| TIGRFAM | 890 | 924 | 35 | 3.6E-9 | ||
| ProSiteProfiles | 923 | 957 | 35 | 11.17 | ||
| TIGRFAM | 925 | 959 | 35 | 5.0E-4 | ||
| Gene3D | 938 | 1074 | 137 | 5.4E-24 | ||
| Pfam | 953 | 984 | 32 | 6.5E-6 | ||
| ProSiteProfiles | 958 | 992 | 35 | 10.742 | ||
| TIGRFAM | 962 | 993 | 32 | 2.5E-6 | ||
| ProSiteProfiles | 993 | 1023 | 31 | 8.374 | ||
| TIGRFAM | 995 | 1022 | 28 | 0.0013 | ||
| Pfam | 996 | 1022 | 27 | 0.056 | ||
| ProSiteProfiles | 1027 | 1061 | 35 | 6.851 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi4g1v0368700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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