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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0371500 |
| Transcript ID | LotjaGi4g1v0371500.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Adenosylhomocysteinase; TAIR: AT4G13940.1 S-adenosyl-L-homocysteine hydrolase; Swiss-Prot: sp|O23255|SAHH1_ARATH Adenosylhomocysteinase 1; TrEMBL-Plants: tr|I1KS65|I1KS65_SOYBN Adenosylhomocysteinase; Found in the gene: LotjaGi4g1v0371500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:75088192..75092136) extracted from Lotus japonicus Gifu genome v1.2.
TTTAGGTTCCCTCAAAATCAGACGATCCGATCTCCCGATCAATATCCAACCAATCAAATTTGTTATAACCCAAATATCTT CATGAGACATAAAGAAATGAGAAATAAACACTAATAAAATGGGTAGTAGAAGATTGTGATTTGCATTAGGTCCACAACTT GTGAAGGAATAGAAATCAGATCCAGTCCAGTCCACCAACTCCCCAATCCCCCAACCCCTATTTATACACACTCCCATTCC CACATTTCCTCTCGTCTCACTCCCTCTTCCTCTCTCACACACACCCTTTACCCTTTCTTTCTTCTCAACCATCACCATAA CCATGGCTTTGTTGGTCGAGAAAACCACATCTGGCCGCGAGTACAAGGTCAAGGACCTCTCTCAGGCCGACTTCGGCCGC CTCGAGCTCGAGCTCGCCGAGGTCGAGATGCCCGGCCTCATGGCCTGCCGTACCGAGTTCGGCCCTGCTCAGCCCTTCAA AGGCGCTAGAATCACCGGATCCCTCCACATGACCATTCAAACCGCCGTCCTCATTGAAACCCTCACCGCCCTCGGCGCCG AGGTTCGCTGGTGCTCCTGCAACATCTTCTCCACCCAGGACCACGCCGCCGCTGCCATCGCCCGCGATAGCGCTGCGGTT TTCGCCTGGAAGGGTGAGACCCTCCAGGAGTACTGGTGGTGCACCGAGCGTGCCCTCGACTGGGGTCCCGGTGGTGGTCC CGATCTCATCGTTGATGATGGAGGTGACGCTACCCTCCTCATCCACGAGGGGGTTAAGGCTGAGGAGGTGTTCGAGAAGA CCGGTGAGCTTCCCGACCCGACTTCCACCGACAACCCTGAGTTCCAGATCGTGCTTACCATCATCAGGGATGGGTTGAAG ACTGACTCCCATAGGTACCGCAAGATGAAGGAGAGGCTCGTCGGTGTCTCGGAGGAGACCACCACCGGAGTCAAGAGGCT TTACCAGATGCAGGCCAATGGAACTCTCTTGTTCCCTGCTATCAATGTCAATGACTCTGTCACCAAGAGCAAGGTCTGTT TTCTCTCCCCTTTTTGCTAGATCTGTTTGTGTTTCTCAATTTTGGATCAAGGGTTTGGTTTTTGTTTTCGTTGTAGATTC AGATCTGTTTTGTCTTGTGTTTTTTGCTGTTCGAAATTCAGATCCACCAAGTGTTTGATGTATGTCTTGAATGAAGTTTG ATCTGTATATTTGTATGCAATTGATATTGATAGGCTTCAGATCTTAAGAAACAACAAATGGGTCATTGAATTTTCATCTA ATATACTTGTATTGATTGCTGATGATTCTTTAGGGTCAGTGGGTGTTTGATATTTGTCATGAATGAAGTTTTGTCTGTGT ATAGTAGTGTGCAATTGATATGGTTTTGCTTCAGATCTTAAGAAACAACAAGTTGGTCATTGGATTTTCATGTACGTTAC TTGTATTGATTGATCATGATTCTTGTGGTAATTGGATCTGGTTAATTATATGTCGGTTTTGTTTGTTGTTGTTGTGTCCT TTTCTTGTCTAACAGTTTGTTTTTTGTGTATTTGATATGTTGGTTGTAACAGTTTGACAACTTGTATGGATGCCGTCACT CTCTCCCTGATGGTCTGATGAGGGCTACCGATATTATGATTGCTGGGAAGGTGGCTGTTGTGGCTGGATATGGAGATGTC GGCAAGGGTTGTGCTGCTGCTTTGAAACAAGCTGGTGCTCGTGTCATTGTGACTGAGATTGATCCCATCTGTGCCCTTCA GGCTCTCATGGAAGGTCTTCAGGTTCTGACCCTGGAGGATGTTGTCTCTGAGGCTGATATCTTTGTCACCACCACCGGTA ACAAGGACATCATCATGGTTGACCACATGAGGAAGATGAAGAACAATGCCATTGTCTGCAACATTGGTCACTTTGACAAT GAAATCGACATGCTTGGTCTTGAGAGCTACCCTGGTGTGAAGCGCATCACCATCAAACCTCAAACTGATAGGTTCGTCTT CCCCGAGACCAACACCGGCATCATTGTCTTGGCCGAGGGTCGTCTGATGAACTTGGGCTGCGCCACAGGGCACCCCAGTT TCGTGATGTCCTGCTCCTTCACCAACCAGGTCATTGCTCAGCTTGAGCTGTGGAATGAGAGGAACTCTGGCAAGTACAAG AAGGAGGTTTACGTTTTGCCCAAGCATCTTGATGAGAAGGTGGCTGCACTTCACCTTGGCAAGCTTGGAGCTAGGCTCAC CAAGCTCAGCAAGGATCAAGCTGATTACATCAGTGTGCCTGTTGAGGGCCCATACAAGCCTCTTCACTACAGGTACTGAG ATATGATCAATGGCTGGTGATGCGATTCAGGGAGAAGAAAGAAACTGTTTTGTGAACCGGATTGATTGTTTTGTTTTCCT TTTCGGATTTTCATTAGACTTTTTATAATTTGTGGTGGAAAGTTGGTAGGATTATGATGATTTTTGTAGAATTTCTGAAC TTGTGGGTGGGAAGGGTAAGAGTAAGGTAATCTATTGGTCTCTGTCATATGAGACCAAATGGGTTTTGAATAATGCATTG GTTGGAGGCTGTGTTCGTTTTCATTTTAGTTGCTAAATTTGTGTTTCTATCTACATATCATCAGAAAAATGAAAAAAATA TTTATACTCTAATATCCAGTGTCAAAAAGCTAAATCTGTGCATTATTTAATTACACGTAAAAATGATTGAATTATGACAA ATGAATTGTTTTTACATGTAAAAGCCATCTCTTTTCAAAGAATCATATCCATCACTCAAGAATAAATTCAGAGTATCCCA AAAATTTCAAACATTAGCCCTTAACCAAACACAAAAGAGGTGGTAGACCGTTATAAAGTTTTATAGAAGTGAATGTAAAT TTGGAAACTTCTTTTTTTTTTTTTTGGTCATGAATTTGGAGAATTGTTTGTCCAAGCTTTTCTTTAACAAGACATTTGGA AAGAGAGCCTTCCTATACTTGCTTGTTCAAATCTGTTTTTTCTCTTCGTGTTTTCTCTTTAGTTTTCATATCTTTCTATT TCTCATTGTTAACCTTTTCTTTTTCTCACTTTCACTTGTTCAATTTCTTCTTTCTCATTCTCTTATTCTTATTATTACTT TTCTTCATCCTTTTTCTATTTTTCTTTCCTGAATACTCTATGTTGTTCCACTTTCTTACAACAATTTTGCTCTTGGGCTC ATCCAACTTCTTGCCACTCCTCAACTCTATAACATCTATGGAAATTTTTCATTGCAGCCTCTTCTGTTCTTTTATTCAAT TAAACTTGAGGGAAATGAATTGTCTCAAATTTACTGAAGCATTTCATATCCTCCTTTAGTAAATCAAATGGATGTTCCTC CTTTAGTAAATCAAGATTTTTTTCTGGAGACCTCTTGACACTTCAAAGTTTCACTAGTCTCATTCACAAAAAGCTTCTTA ATTTTGAAATTTACTCTAACTTCATGCACAAGATTCGGGGGGCTTTGGCCATTGGCATGCGCCCCATTGGCAAAATCATA CTTCAACATGGGAGCTTCTATTGCCTTAGCTTGAAGTCCTTCAATCTTCTTAGACACTGACGCCATTTGTTGCGATAAAA GCTTGTTTTGCGCAAGAAAGACATCAAATGTCTCAATCTCAATATTCCCTTTCAGTTTTGCTTATCATTGGTGGATGATG GTCTCCGTCACCAATTCGCTAATGAATGATGTGACTTGTGAGCATCTCCTCAAGACATCCTTATATCTATCTTATGCATC ATAAAGTGATTCGGAATTTAATGTCACAAGAAATTAATTTCATTCTTCATCTTTCTCCATCTAGATGGAAAAAAAATGCT TGCTCACAAACTTGGTCTCCAAATCCTCCACTGATACTTCTTTGTGGTTGTGATTGAAGCCATGCCTTGGCTTTATCCCT CAAAGAGATAAAAAAAAAAAAAAAA
CDS sequence (LotjaGi4g1v0371500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTTGTTGGTCGAGAAAACCACATCTGGCCGCGAGTACAAGGTCAAGGACCTCTCTCAGGCCGACTTCGGCCGCCT CGAGCTCGAGCTCGCCGAGGTCGAGATGCCCGGCCTCATGGCCTGCCGTACCGAGTTCGGCCCTGCTCAGCCCTTCAAAG GCGCTAGAATCACCGGATCCCTCCACATGACCATTCAAACCGCCGTCCTCATTGAAACCCTCACCGCCCTCGGCGCCGAG GTTCGCTGGTGCTCCTGCAACATCTTCTCCACCCAGGACCACGCCGCCGCTGCCATCGCCCGCGATAGCGCTGCGGTTTT CGCCTGGAAGGGTGAGACCCTCCAGGAGTACTGGTGGTGCACCGAGCGTGCCCTCGACTGGGGTCCCGGTGGTGGTCCCG ATCTCATCGTTGATGATGGAGGTGACGCTACCCTCCTCATCCACGAGGGGGTTAAGGCTGAGGAGGTGTTCGAGAAGACC GGTGAGCTTCCCGACCCGACTTCCACCGACAACCCTGAGTTCCAGATCGTGCTTACCATCATCAGGGATGGGTTGAAGAC TGACTCCCATAGGTACCGCAAGATGAAGGAGAGGCTCGTCGGTGTCTCGGAGGAGACCACCACCGGAGTCAAGAGGCTTT ACCAGATGCAGGCCAATGGAACTCTCTTGTTCCCTGCTATCAATGTCAATGACTCTGTCACCAAGAGCAAGTTTGACAAC TTGTATGGATGCCGTCACTCTCTCCCTGATGGTCTGATGAGGGCTACCGATATTATGATTGCTGGGAAGGTGGCTGTTGT GGCTGGATATGGAGATGTCGGCAAGGGTTGTGCTGCTGCTTTGAAACAAGCTGGTGCTCGTGTCATTGTGACTGAGATTG ATCCCATCTGTGCCCTTCAGGCTCTCATGGAAGGTCTTCAGGTTCTGACCCTGGAGGATGTTGTCTCTGAGGCTGATATC TTTGTCACCACCACCGGTAACAAGGACATCATCATGGTTGACCACATGAGGAAGATGAAGAACAATGCCATTGTCTGCAA CATTGGTCACTTTGACAATGAAATCGACATGCTTGGTCTTGAGAGCTACCCTGGTGTGAAGCGCATCACCATCAAACCTC AAACTGATAGGTTCGTCTTCCCCGAGACCAACACCGGCATCATTGTCTTGGCCGAGGGTCGTCTGATGAACTTGGGCTGC GCCACAGGGCACCCCAGTTTCGTGATGTCCTGCTCCTTCACCAACCAGGTCATTGCTCAGCTTGAGCTGTGGAATGAGAG GAACTCTGGCAAGTACAAGAAGGAGGTTTACGTTTTGCCCAAGCATCTTGATGAGAAGGTGGCTGCACTTCACCTTGGCA AGCTTGGAGCTAGGCTCACCAAGCTCAGCAAGGATCAAGCTGATTACATCAGTGTGCCTGTTGAGGGCCCATACAAGCCT CTTCACTACAGGTACTGA
Protein sequence (LotjaGi4g1v0371500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MALLVEKTTSGREYKVKDLSQADFGRLELELAEVEMPGLMACRTEFGPAQPFKGARITGSLHMTIQTAVLIETLTALGAE VRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWCTERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEVFEKT GELPDPTSTDNPEFQIVLTIIRDGLKTDSHRYRKMKERLVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDN LYGCRHSLPDGLMRATDIMIAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVVSEADI FVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLESYPGVKRITIKPQTDRFVFPETNTGIIVLAEGRLMNLGC ATGHPSFVMSCSFTNQVIAQLELWNERNSGKYKKEVYVLPKHLDEKVAALHLGKLGARLTKLSKDQADYISVPVEGPYKP LHYRY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 485 | 485 | 0.0 | – | |
| PANTHER | 1 | 485 | 485 | 0.0 | ||
| PIRSF | 2 | 485 | 484 | 2.6E-185 | ||
| Hamap | 9 | 477 | 469 | 47.278 | ||
| SUPERFAMILY | 13 | 242 | 230 | 4.34E-115 | – | |
| Pfam | 13 | 484 | 472 | 2.4E-144 | ||
| SMART | 13 | 484 | 472 | 0.0 | ||
| TIGRFAM | 14 | 477 | 464 | 3.6E-180 | ||
| Gene3D | 16 | 485 | 470 | 1.1E-253 | ||
| CDD | 23 | 473 | 451 | 0.0 | ||
| ProSitePatterns | 85 | 99 | 15 | - | ||
| Pfam | 240 | 403 | 164 | 2.1E-82 | ||
| SUPERFAMILY | 240 | 403 | 164 | 1.56E-77 | ||
| SMART | 240 | 403 | 164 | 1.8E-104 | ||
| Gene3D | 243 | 404 | 162 | 1.1E-253 | – | |
| ProSitePatterns | 262 | 279 | 18 | - | ||
| SUPERFAMILY | 380 | 485 | 106 | 5.61E-28 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Adenosylhomocysteinase activity | Catalysis of the reaction: S-adenosyl-L-homocysteine + H2O = adenosine + L-homocysteine. |
Expression pattern of LotjaGi4g1v0371500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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