Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi4g1v0382700 |
Transcript ID | LotjaGi4g1v0382700.4 |
Related isoforms 3 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Pentatricopeptide repeat-containing protein, putative; TAIR: AT5G65560.1 Pentatricopeptide repeat (PPR) superfamily protein; Swiss-Prot: sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560; TrEMBL-Plants: tr|A0A151RA84|A0A151RA84_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0382700 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:76146115..76158317) extracted from Lotus japonicus Gifu genome v1.2.
GACAACCTCAAACATTTCCGAACATGGTCGTGTCTGAAATTCTGATGTTGCAGATATACACTTCAACTTCACAAAACAAC AAATAATAATTCGATTTCTATGCTCCAAGCCGTGGCGGCGCATGGTGAGTTCTTCTACCTTTCTCCTTGTTTAGCTGTTT TTCACACGTTTTCCATGTTTCTGCTAACTGGGTATCATTCATAATCATAGGTGTATGTTCATGTCGCTGATATGCTTCCT TGGGCGTAGTGTTTTGCTCCACAGCAAACTGCACTCCCGGTACCAATCATTGTTTAGGTTCTATTCCTCTGCTTCTTCTG CATTGATGTTTGACGACTACCTGTTTGATGAAAGTCCAAAACTAGATACTAGTTCACAAACCAACATGATGTCTGTTGCC CCGGTTCCCGAAACCAATAAGGACTTGTTTCGTTTAGTGGTTAGGGTGTTTAAGTCATTGAGTTGGAGGGTTGCAAGGGA AAGAAGATTTGGGAGTTGGGTTGAGACTCACGGGTTTTCGCATTCTATCGATTCGTTTAGAATCGTCATTCATACGTTTG CTCTGGCGGGGATGGAGAGGGAGGTGTTCGCTTTGCTTAGAGATATTGTTGAGTACTGCAATGAGGGTAAGTATGACTGG TCAAGAGCGTTTGAGGCCTTGCTGGATTCACCGCATCGTGTGGGAAGATCTGCTCTCGTGTTTGATGTGCTTATAAAAGT GTTTGCTTCCAACAAAATGCTTGACCACGCTCGCCATGTGTTTGTGAGCGCTAAGCATGTTGGGCATGAACCTGATATAA AGTCTTGCAATTTCTTGTTGAAATGCTTGACAGAGGAAGCGAATGTAGCGGAGTTTGATGTCAGGGGTTTCTTTAAGGAA TTGATAGACACTGGTCCATTGCCAAATATCCACACCTATACAATCATGATGAACTTTTATTGTGGAGATATTGGATGGGC TAAAATGATTTTAGGAAAAATATATCGGAGTGGGATAAACCCAACCGTTGTCACATATAGTACATATATTCGTGGACTTT GTGAAGGTGGTTCTGTTGAGGTTGCTCAGCAGTTAGTTCTTAACTTGCACTACAAAAGCCAGCCTCTAAATACCCATTGT TTTAATGCTGTAATTAAAGGATTTTGTCAAAAAGGTGCAGTTAATGAAGCTTTGGAAGTTTTAGAAGAAATGGAGAAATC GGGAATATTTCCTGATGTTTATAGCTATAGCATTTTAATTGAAACATTCTGCAATGAAGGGGATGTTGAGAAAGGTGTTG TCTTGATATCAGAAATGGGGCGGCGCGGGATAAATCCATCTATTGTTAGCTACACTTCCCTCATCCGTGGTCTATGCAAG GATAAACAGATGCAAGCAGCAGAGGAAATCTTTCGTAGTATTGGTACTTCTGGTTACAAATATGATCTGACTATTTATGA AATTTTAATTGATGGATTTTGCATGCAAGGTGATATGGATTCAGCCATCAAGTATTTGGAGGAGATGTCTAGCAGTAACT TGGCTCCTTCCCCTTCTAGTTACTCCAGTCTAATTAGGGGATTCTGCAAAGTGGGACTCTTCGATAAGGCAAAGGAATTT TTTGGTTACATGCTGCAAAATGGTGTGTTGCCGAATACAATTACCTGCAATCATATTCTTAGGGCATACTGCAGGACAGG TCAATTCAGAGAAGCTTTGACACTATTGGAAGAGTTCCAAGAAAATGGAATTAGCCTCAACCCATATTCGTATAATGAAA TCATCCACACGATTTGCAAAGAAAGTCCAGAAAAGGCCCTAGAGCTCCTGCCAAGAATGCTGAAAAGGAATGTACGTCCA GGAGTTGTTAATTATAGTACTCTTATATCTGGCTTCGCCAAACAGTTAGATTTTAAAGCTGTGAAGTTATTCATAAGGAT GGTAAAAGGAGGGATCACTTTCAACACCTTCACGTATACAATTCTTATTAGCATATTTAGCCGTAGTTGCAAAATGCATG AAGCATATAGAATATATAAGGAAATGAAAGAAAGAGAAATGCGTCCAGATCAGGTGACATATACAACTTTAATAGATGGC TTTTGTAATACCAGAGAAATGGAGAGGGCCTATGCATTATGTCAAGAAATGTCAAGGGAAGGTTGTTTGCCTAATGTAGT TACATATACTTGTTTGATTAATGGATTCTGCAAGTCAGACAGGATAGAGACGGCCACATTGCTGTTTGATGAAATGAAAA AAGCTAGAGTCTTTCCTGATGTTAAAACTTACACTGCCCTCATTTCTTGGTACCATAAGCATGGTGACATTGGTCTGGGA AATAAGTTACTTGATGAAATGAAGGCAAATGGTATTTCGCGAGATGTAGTTACGTATACTTGTTTGATTAATGGATTCTG CAAGTCAGACAGGATAGAGACGGCCACATTGCTGTTTGATGAAATGAAAAAAGTTAGAGCCTTTCCTAATGTTAAAACTT ACACTGCCCTCATTTCTTGGTACCATAAGCATGGTAACATTGATCGGGGAAAGGAGTTATTCGATGAAATGAAGGAAAAT GGTATTTCGCCAGATGTAGTTACGTATACTTGTTTGATTAAAGGATTCTGCAAGTCAGATAGGATAGCTATGGCCATATT GCTGTTTGATGAAATGAAAAAAGTTAGAGTCTTTCCTAATGTTAAAACTTACACTGCCCTAATTGCTTGGTACCATAAGC ATGGTCAAATTGATCGGAAAAATGAGTTATTCGATGAAATGAAGGCAAATGGTATTTCACCAGATGATTACATATAAAGG TTCTGGAACTGAAAGCTGGTGCAATTCATAAATATTAGGTAGCTGTTCGACGGTAAGAATTTTTGTTTGATCTATGCCTT TGTCTTTCAATTTTGTTTGATCTATTTCTCCACTGCTTACTTTGTTATGGTTTTGAAGTACTTGGTGTTATATCTGTAGC TTGGTGGCATCAAATGATCAATTAGTTGGCCTTGATGAGTTTTCTGTTCTGAGAAATTTGTAGCACATGCTTCTGCTGTC AGTTGCCTCAAAGATTGGACGGGAATCATCCAGTGTTCTTGTCATAGGAGGTAAATATCACAAGGTCAATCTTTGGGCTA TTGGTAAACAAAATGCCATGCTGGTTAGTTCAAAATATGACTATAAAATGTAAATAGAAACATTTTTTAACGTAGCCCAA ATATAATTTTCTCTAATCAGTTTATATTATACTTGTGCCTTATGAGGAATGTTTTGGTAGATATTTTTTGGACAACTAAC CTTATTGAATCTTTGGATAGAATTTTATGATATGCTTATTTATTGCCTTTAATGCAGCTTTCATGAATTTTATTGTTGTA ATGCTTCCAACTAGAAAAGTTTCCGGGTTATAATTTCTAGTGCAGAAACTATCCACTTATATCTTCTTTTGGTTATTCTT AAGATGTTGGTTTTGTCTTTTACTCAATATTTTTTTTGTGTAATTCTCTTTGTATTCTTCTTCTTACTCCATGCTTCATT TGGTTAAATATCCTCTAGAACCTAGGTCAGTGAAAAACTTATCCGAATGGACCAATTTGGTGCTTTCCTTATGAATCATT CCAGTGAAATGATTTGAATAATTTACTATGCTTGCCTGTTTTCTTGATATGTTGGTGTAGGTGATACTTCTGTTGAAAAT TTTGGAGTCAATCCTATTGGACAACATTAGTCATCTTCAACTACCACCATTATGTTACCATCCCAGGAATTGGCAAGCTA GAAGGTCCACTTGCTGATATAGATCTCACAATGTAAAACTTACATTAGCTAATAAGCCTTTCATATACAAATTAGATAAT TTTCATGAGATTTCTGTTTCTGAAATGCATTATTTTTTCTAGGAAAAAGGTCTTCTCAGTATCCATGCGTGGAGGCTTTT ACATGTGAGCTTAAAAATATCTTTATTTTCATTGTTGCATTGGCATGCTTGTCCATGATACAACCGAAGGTAAACCGATA TCTTTTGTTGATTCTTCATTTCAGCTCCCTTTCTTTTCCTATCTAGATTTCGCTAAAATATGAACGATGGTCCTAAACTC AGAGCTTCATCCATGTAAGTTTCTTTTTCTTATTTACTTTCTAGATAGGGAAATTTGGCTTCAATTTTACAAGTTTCTTT TCTATTGCACCAGGTGCTCTTCTGCCTTTTGCTTATGGCCTTTCAAACTCCAAACTTAAGTATAATTGGTTTCTGCTATT GCTTTAACATATTTATAATAAAAGAATTGGAATATTCCTTTTCCCCACAATCCCCCTCATGAAGTGTTGGTTTCTACTAA ATGGCTATGATTATTGTTACCCCCCTATTTTTCTGAGCAGAGCTTTTTTAGAGAAAAATAAATTCTCTTAAAAATGTCAA GAATTACGCCTTCTCTGTTACAGAAAAGTTCCAAGCATGTGAAAATGGACTCTTCCAATTCCTTTTGTTTTTACTTTTAT ATGATTTATATTTTTGTTTACTTTTGTAGATTGTGTTGTCTATCATGGAAATCCAAAATGACATGTGGTGGAATTGCATT GAAGTTCTTTGCATCACCTCGGCTAGAAGTTCGTCCTATAGGGAAGATAAAGCCTGTAAGCACAATGGCTCGACTATGAC ATAATGTTATGTATCATCTTAAACAATGACTCCCCTTTGTTTTGTGACTGAATGACTCTAATAAACCATGACTAATGCTT TCTTTGTCACCAATGCAACCAAGGTTGTCAATTTACATAAACTCATGGAGTGTCTGTAAACTCGACTCGTGAAAATTCTG TGTTTGATAATTCTCAGTGTGCTTCTGATAAGAACCTTGAGAGAACCACACCACAAAAGCTAGCTGTTGTAGTTGGATAG CTCAAAGTCGTATAAATCCCACATTAGAATCCCATACTTCCAATGTGGGTCTCAAGTCCCATACCTTGGAATTGGGTTCC TAACATCCCACGACGTTCTGCAGCCCCGGCACCCACATAGGCTGGCTGTGCACTAGCCCTTTGACTAGTCCTGAGCGAAC ATTGCAATGCCGGCGTCACCACCCATGCCGCTCATTTGCAACCGAGAGACATGGTGGAAGGCTCTGATACCAATTGATAA GAACCTTGGGAGAACCACACCACAAAAGCTTCTCCCAAGGTTCTCATCAACTTTTATCAAATATTTATGCAGCTTCTGAA AAATGGGAGAAAGCTAAAAGGATGAGGTGGATCTATATGCTGCCACTTCATCTATATTTTTGCCATGTAAGATTATTTTT GACATCTCACAAATAATCTGAGGTATGAACCTTACTATTCTTTCCTTTCTTTTCAATTCACCCATTTATCTGTTTTTTTA CTGAACCATGACTCCAATTCAATTGACTCAACCTTCAGTTTTCCACACCAATGACACAAGCAGAGTTGCAAAAATCTTTG AGCAATTTAAGAGGTGAAATCTAGATTAAATATAGTGAATATGCACGAGGTCAATGCTCCCTAATCCATTCCTTTCTGTA GAGAACAAATACAGAGTCAAATTTTGCTGCATAGTTCTAATTTAAGAGGTACTTTTTTTTATTGTTTTTGTTGATCTGTT TTGTAGGTTGTCTTCCTTATATTCACTCCTTCAATTGAATATTTCAGTTTTCCCAGGAGTGTTCCCCTTGAAGATATGAT AATATCACAGGTACGCATGTATTTGTTTTCCACCCTAGGAAACTCCCCGCATGATTATTTTGCCTTTTTTTATATGTATT TTTGGAACAATTTTGTTCATAAACTCCTATGGAACTGACAAAAAAAAGTTACTGAACAACTGTAAGAATACTTGCTGGAA TAGAAGGTGGTATACTCCAATGAGCATACTTAATGAGAAGTGGAATTGAGAATGAACTTTGGTCGAGCTCAAAAGCAAAA TCAAAACCGTGTTGGTGTTGGTTCATTACCCTTTATTTGTTTTCTAAAACGCTGAGAGCTATTGTGCATGAATTAAATGA CAATGAACCAAGGCAGTTTTGATTTTGAGCATAGCCATAAAGATTGATTGTTATATTGGGTTGCAACATGTTGCAAACCC AAGCTCCAGGCCCAGGTTTGGCAACGTCTATGCTAGGAGGCCCAAGCCACAGCTGGAGGCCAACATTCTAGAAGCTTAGG ATCCCAAAATAACCACCACCTGGTGAGGTGGCAGATTCTCAATGATAAGGAGGGGACCAGTACTATTAGCTAAGGATATA TATGTTAGTATAGAGAGAGAGAGAGGTAGGCAGAAATTGGCTAGGACTTGGGAGAGATAGAGCACTCTCGAATTTGCTCT TGTTCATTTTCTTCTTCATTTGCTTTCCTTTGTATTACTGCAAACACTGCTTCTGGGTTCATACCAGAGGATTCAGTGCT AATCTAGTAAACTCAGTCTCTATTTTCCTACTCTGTTTTCTGGTACCTAACATTGGTATCAGAGCTCCCGATCCAAAAAG GGAGCTGTATGGTGCTGACCCGCGGTGCGATGGAATCAAGAGTGGATGATCTGGAGCGTTCCCTTACTGAGATGAAAGAG GTGGCTCACGAACAGTTTGAAGAACTCCGGCGACTCTTCCTGAGTCGCGACCGACGGCGAACCAGGGGGCGTTCTAATAC CCCGCGGCATCGGAGGAGCTCACGCGAGCACAACTCAGTCTCAACAGCGAGAACTTATGACGGGTCACGAACCGGGTCGC GTACAGGGTCGCGAACAGCGTCGCGCAGCAGAGAACACCACGAGCACTATCACCACCGGAGCCATTTGCGCGCCGTCACA GGAAGACGAGTGGACATCCCGATGTTCAATGGAAACGACGCTTACGGGTGGGTCACCAAGGTTGAGCGGTTTTTCCGACT CAGCCGGGTCGAGGAAGCGGAGAAGATCGAGATGGTGATGATCGCCATGGAGGATCGTGCTCTTGGGTGGTTTCAGTGGT GGGAAGAGCAGACATTAGAGCGAGCTTGGGAACCTTTCAAACAAGCTCTGTTTCGCCGTTTCCAACCCGCACTTCTCCAG AACCCGTTTGGTCCTCTGTTGAGTGTGAAACAGAAAGGAAGCGTTATGGAGTACAGGGAGAATTTTGAGTTACTAGCAGC GCCCATGAGGAACGCTGACAGAGAGGTGCTGAAAGGAGTATTCTTAAACGGGTTGCAAGAAGAAATCAAAGCTGAAATGA AGCTGTACCCTGCTGATGATCTAGCAGAATTAATGGATCGAGCGTTGTTGCTCGAAGAGAAAAACACAGCTATGAGAGGA GGCAAACCTAAGGAGGAAGACAAAAGGGGATGGAAGGAAAAAGGGGGTGTTGGGGGAAGGTATTATTCCAGTACAGGGGA CAGCAAGGGAAGAATTGCAAACTCTTATGTGAATTTCCAGAGCAAAGGGGGTACAGGAAATCAAGACAATGAAGGGAAAA GTCTCCAGAACAAAGGAGGCACTGGTAATCAGGACACAGAAGGAAAACAACCAGAAAAGAAGTGGAATGGAGGGCAGAGG TTGACCCAAACTGAACTCCAAGAGAGAAGCAGGAAGGGATTATGCTTTAAGTGTGGAGACAAATGGGGGAAAGAACACAT TTGCTCCATGAAAAACTACCAACTCATTCTGATGGAAGTAGAGGAGGATGAGGAAGAAGAAAAGACAGAAGCTGAAGTGC CAGAGGGAATGAGGAAAATTCTGGAAGAATATCCAGAAGTGTTCCAAGAGCCTAAGGGACTACCACCAAGAAGGACCACT GACCATGCTATTCAATTACAAGAGGGAGCTTCCATTCCCAACATCAGACCTTACAGGTACCCTTTCTATCAAAAGAATGA AATTGAGAAGTTGGTGAAAGAAATGCTGAATTCTGGAATAATTAGGCATAGTACTAGTCCTTTCAGCAGCCCAGCTATTC TTGTAAAAAAGAAAGATGGGGGATGGAGATTTTGTGTAGATTATAGAGCCCTTAACAAGGCCACTATTCCTGACAAATTC CCTATACCAATTATTGATGAACTCTTGGATGAAATTGGGGCTGCTGTGGTTTTCTCAAAGCTGGATTTAAAATCAGGGTA CCACCAGATTAGGATGAAAGAAGAAGACATCCCTAAGACAGCTTTTAGAACCCATGAAGGGCATTATGAATACTTGGTCC TCCCTTTTGGATTGACAAATGCACCATCTACATTTCAAGCACTCATGAACCAAGTGTTGAGACCTTACTTGAGGAAGTTT GTACTTGTTTTTTTTGATGATATCCTCATTTATAGTAAGAATGAAGAGCTGCACAAGGACCACTTAAGGATTGTCTTACA AGTGTTGAAGGAAAACAATCTGGTTGCAAACCAGAAGAAATGTTCTTTTGGTCAACCTGAGATAATTTATTTAGGACATG TCATATCACAAGCAGGAGTTGCGGCTGATCCTAGCAAGATTAAAGATATGCTAGATTGGCCTATTCCTAAGGAGGTGAAA GGATTAAGAGGGTTCTTAGGACTCACAGGGTACTACAGAAGATTTGTGAAAAATTACAGCAAACTAGCACAACCTCTAAA TCAATTGCTCAAGAAGAATAGCTTCCAGTGGACTGAAGGAGCCACCCAAGCTTTTGTGAAGTTGAAGGAAGTGATGACTA CTGTTCCAGTTCTTGTTCCACCCAATTTTGACAAACCTTTCATTCTGGAAACAGATGCTTCTGGGAAGGGACTTGGAGCT GTCCTTATGCAGGAAGGAAGACCAGTTGCCTATATGAGCAAAACTTTATCTGATAGGGCTCAAGCCAAATCTGTTTATGA AAGAGAATTGATGGCAGTGGTTCTTGCTGTGCAAAAATGGAGACATTATCTCCTAGGGAGCAAGTTTGTCATACACACTG ATCAGAGAAGCTTGAGATTTCTAGCAGATCAGAGAATAATGGGGGAAGAACAACAAAAGTGGATGAGCAAGTTGATGGGC TATGATTTTGAAATTAAGTACAAGCCTGGGATTGAAAACAAAGCAGCTGATGCTTTATCCAGGAAGTTGCAATTCTCTGC CATATCCTCAGTCCAGTGTGCTGAATGGGCAGATTTGGAAGCTGAGATATTAGAGGATGAAAGATATAGAAAGGTTCTGC AGGAGTTAGCCACTCAAGGGAATTCTGCTGTTGGTTATCAACTGAAGAGGGGAAGATTGCTATACAAAGACAGAATAGTT CTCCCTAAGGGCTCTACCAAAATTCTCACTGTTCTGAAGGAATTTCATGATACAGCCTTAGGAGGCCATGCTGGAATTTT CAGAACCTACAAGAGAATATCAGCTTTATTCTACTGGGAAGGCATGAAGCTAGACATTCAAAATTATGTACAAAAGTGTG AGGTGTGTCAGAGGAACAAATATGAGGCACTAAATCCAGCAGGATTTCTTCAACCACTCCCTATACCCTCTCAAGGTTGG ACTGATATATCCATGGATTTCATTGGAGGTCTCCCTAAAGCCATGGGAAAAGATACCATACTAGTGGTAGTAGACAGGTT TACTAAGTATGCACACTTCATTGCTTTATCTCACCCATACAATGCCAAGGAGATTGCTGAAGTATTCATCAAAGAAGTGG TAAGACTACATGGTTTTCCCACCTCCATTGTGTCTGATAGAGACAGAGTATTTCTCAGCACATTCTGGTCAGAGATGTTC AAACTAGCTGGCACAAAATTGAAATTCAGCTCTGCATACCACCCTCAGACAGATGGACAAACTGAGGTGGTTAATCGATG TGTTGAGACATATCTAAGGTGTGTAACAGGGTCCAAACCAAAGCAATGGCCCAAATGGCTGAGTTGGGCAGAATTCTGGT ACAATACAAATTACCATTCAGCCATCAAAACCACTCCTTTCAAGGCTCTTTATGGGAGAGAACCACCTGTGATTTTTAAG GGAAATGATTCTTTAACATCAGTAGATGAAGTGGAGAAATTGACTGCTGAGAGGAATCTAATTCTAGAGGAGCTCAAGAG TAATCTAGAGAAGGCACAGAATAGAATGAGGCAGCAGGCCAACAAGCACAGAAGGGATGTTCAATATGAAGTGGGGGATC TGGTTTATCTGAAGATTCAACCCTATAAGCTCAAGAGTTTGGCTAAGAGAAGCAATCAGAAGTTGAGTCCTAGGTATTAT GGACCTTATCCAATTATAGCAAAGATCAACCCAGCTGCCTATAAACTGCAGTTGCCAGAAGGAAGCCAAGTGCATCCTGT CTTCCATATTTCCCTGCTCAAGAAGGCTGAGAATGCAGGAGTTCAAAGCCAACCATTACCAGCAGCTCTTACTGAAGAAT GGGAACTCAAGGTCGAACCAGAAGCTATTATGGACACCAGGGAAAACAGGGATGGGGACTTAGAAGTGCTAATCAGGTGG AAGGACCTACCAACATTTGAAGACTCATGGGAGGATTTCAGTAAGTTGCTGGACCAGTTCCCTAATCATCAGCTTGAGGA CAAGCTGAATCTTCAAGGGGGGAGAGATGTTGCAAACCCAAGCTCCAGGCCCAGGTTTGGCAACGTCTATGCTAGGAGGC CCAAGCCACAGCTGGAGGCCAACATTCTAGAAGCTTAGGATCCCAAAATAACCACCACCTGGTGAGGTGGCAGATTCTCA ATGATAAGGAGGGGACCAGTACTATTAGCTAAGGATATATATGTTAGTATAGAGAGAGAGAGAGGTAGGCAGAAATTGGC TAGGACTTGGGAGAGATAGAGCACTCTCGAATTTGCTCTTGTTCATTTTCTTCTTCATTTGCTTTCCTTTGTATTACTGC AAACACTGCTTCTGGGTTCATACCAGAGGATTCAGTGCTAATCTAGTAAACTCAGTCTCTATTTTCCTACTCTGTTTTCT GGTACCTAACACAACATGTCTAAAACAAAGCTATTGAAGAAAAGCCTTGGATGATTAAAGTATTTTAGACTTTGCATTGT TTCTGACAAGGATGCTAAGCCAATCACTTGTGATTCACCTAGCTTTGGATGTGGTCCCAAAGGACGTAGGGCGAGCAAGT AGGGTTACGAGGGTCAAAGATCACCTTACTCATTGGCACTGCAGGGCCATAAGGTTCGCTAATTAGATATAGCAAGAAAT AACTGATTTTATTATCTTTGTCAGTAATGGTCTTAATGAATTGTTTATGACTGATGTATATTTGGTGAATGGGAGTAGAG TACATGAAGAGAGAAAGAATAACAAAATCTGGGCACAAAAGAGCATTAATCATTTTTAAATTTTTATGTTAAATCATAAT TTATCTGACCATGTATGCAGGTGGTTTATATGGATAAGTCTATGGATTGGAATAAGTTTTTTTATTTATTCCTAATCCAT TGACTTATCCATATATAAGATTTTTGACATGATTAGATTTATTTCCCCATGACATGAGATAATAACTAATCATTGTTCTG TTATAGTTTGTATGAAAATTCATTTTTTCATGTGAATTGCCACTGACCATATGGACATCTTTTATGTTTTCCTACTGATA CATTATGATTGTATGATGTTAAAAAGAAATGCTCATCAACTCTGTTGATTCAGATTGGTTAATTCAGATAGGCTAGTTGG TGGGTTCTTTTCATAAAAACAAATTTATCTGCAAAATAGTTGTTTCTTACCAAATGTATAGACCAGCTAAACAGAATAAA ATATGGAGATTGAAGTATTTCTTCATGGCTTGCAGATTGTTTGCTGCATTCTCATGAAATAAACATGAAGTTGTTGGACA AGGAAATGGCCCCTCTACAGGGTACTGTGATGAAGAGTACAGTTTTCAGCAGATCAATTTTTTACCATTGTGTAATGTTC ATTATAACGGGTGGTTGGTTAAAGAGGCACATGCTTTGACTCCTCTGGTAATTGTTCGAGTTCAAGTCTTATTTTATGTG TATGGGAAAAAAACCTGTTGGAAGAGCTAGCCCCTACAGGATATGAATGTTCTCAACCAACCGGAACATGATTGTCTTCC AATGCATAAAGCTCCTACATGGTCGGGATACAGGAAGGGGTTTGACCATTTAGTCTATTGTACATAGTCTTACCTTGTTT TCTTTTTTACACAAGAGACAGTTTTCAGAACTTAAACCAATGATCTCTGCCACATGATAACTTTTTACCGTTGCGCTAAG GTTACCCTTCAAATTTTATATAGATGATTAAATTGACGGTAAA
CDS sequence (LotjaGi4g1v0382700.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTCATGTCGCTGATATGCTTCCTTGGGCGTAGTGTTTTGCTCCACAGCAAACTGCACTCCCGGTACCAATCATTGTT TAGGTTCTATTCCTCTGCTTCTTCTGCATTGATGTTTGACGACTACCTGTTTGATGAAAGTCCAAAACTAGATACTAGTT CACAAACCAACATGATGTCTGTTGCCCCGGTTCCCGAAACCAATAAGGACTTGTTTCGTTTAGTGGTTAGGGTGTTTAAG TCATTGAGTTGGAGGGTTGCAAGGGAAAGAAGATTTGGGAGTTGGGTTGAGACTCACGGGTTTTCGCATTCTATCGATTC GTTTAGAATCGTCATTCATACGTTTGCTCTGGCGGGGATGGAGAGGGAGGTGTTCGCTTTGCTTAGAGATATTGTTGAGT ACTGCAATGAGGGTAAGTATGACTGGTCAAGAGCGTTTGAGGCCTTGCTGGATTCACCGCATCGTGTGGGAAGATCTGCT CTCGTGTTTGATGTGCTTATAAAAGTGTTTGCTTCCAACAAAATGCTTGACCACGCTCGCCATGTGTTTGTGAGCGCTAA GCATGTTGGGCATGAACCTGATATAAAGTCTTGCAATTTCTTGTTGAAATGCTTGACAGAGGAAGCGAATGTAGCGGAGT TTGATGTCAGGGGTTTCTTTAAGGAATTGATAGACACTGGTCCATTGCCAAATATCCACACCTATACAATCATGATGAAC TTTTATTGTGGAGATATTGGATGGGCTAAAATGATTTTAGGAAAAATATATCGGAGTGGGATAAACCCAACCGTTGTCAC ATATAGTACATATATTCGTGGACTTTGTGAAGGTGGTTCTGTTGAGGTTGCTCAGCAGTTAGTTCTTAACTTGCACTACA AAAGCCAGCCTCTAAATACCCATTGTTTTAATGCTGTAATTAAAGGATTTTGTCAAAAAGGTGCAGTTAATGAAGCTTTG GAAGTTTTAGAAGAAATGGAGAAATCGGGAATATTTCCTGATGTTTATAGCTATAGCATTTTAATTGAAACATTCTGCAA TGAAGGGGATGTTGAGAAAGGTGTTGTCTTGATATCAGAAATGGGGCGGCGCGGGATAAATCCATCTATTGTTAGCTACA CTTCCCTCATCCGTGGTCTATGCAAGGATAAACAGATGCAAGCAGCAGAGGAAATCTTTCGTAGTATTGGTACTTCTGGT TACAAATATGATCTGACTATTTATGAAATTTTAATTGATGGATTTTGCATGCAAGGTGATATGGATTCAGCCATCAAGTA TTTGGAGGAGATGTCTAGCAGTAACTTGGCTCCTTCCCCTTCTAGTTACTCCAGTCTAATTAGGGGATTCTGCAAAGTGG GACTCTTCGATAAGGCAAAGGAATTTTTTGGTTACATGCTGCAAAATGGTGTGTTGCCGAATACAATTACCTGCAATCAT ATTCTTAGGGCATACTGCAGGACAGGTCAATTCAGAGAAGCTTTGACACTATTGGAAGAGTTCCAAGAAAATGGAATTAG CCTCAACCCATATTCGTATAATGAAATCATCCACACGATTTGCAAAGAAAGTCCAGAAAAGGCCCTAGAGCTCCTGCCAA GAATGCTGAAAAGGAATGTACGTCCAGGAGTTGTTAATTATAGTACTCTTATATCTGGCTTCGCCAAACAGTTAGATTTT AAAGCTGTGAAGTTATTCATAAGGATGGTAAAAGGAGGGATCACTTTCAACACCTTCACGTATACAATTCTTATTAGCAT ATTTAGCCGTAGTTGCAAAATGCATGAAGCATATAGAATATATAAGGAAATGAAAGAAAGAGAAATGCGTCCAGATCAGG TGACATATACAACTTTAATAGATGGCTTTTGTAATACCAGAGAAATGGAGAGGGCCTATGCATTATGTCAAGAAATGTCA AGGGAAGGTTGTTTGCCTAATGTAGTTACATATACTTGTTTGATTAATGGATTCTGCAAGTCAGACAGGATAGAGACGGC CACATTGCTGTTTGATGAAATGAAAAAAGCTAGAGTCTTTCCTGATGTTAAAACTTACACTGCCCTCATTTCTTGGTACC ATAAGCATGGTGACATTGGTCTGGGAAATAAGTTACTTGATGAAATGAAGGCAAATGGTATTTCGCGAGATGTAGTTACG TATACTTGTTTGATTAATGGATTCTGCAAGTCAGACAGGATAGAGACGGCCACATTGCTGTTTGATGAAATGAAAAAAGT TAGAGCCTTTCCTAATGTTAAAACTTACACTGCCCTCATTTCTTGGTACCATAAGCATGGTAACATTGATCGGGGAAAGG AGTTATTCGATGAAATGAAGGAAAATGGTATTTCGCCAGATGTAGTTACGTATACTTGTTTGATTAAAGGATTCTGCAAG TCAGATAGGATAGCTATGGCCATATTGCTGTTTGATGAAATGAAAAAAGTTAGAGTCTTTCCTAATGTTAAAACTTACAC TGCCCTAATTGCTTGGTACCATAAGCATGGTCAAATTGATCGGAAAAATGAGTTATTCGATGAAATGAAGGCAAATGGTA TTTCACCAGATGATTACATATAA
Protein sequence (LotjaGi4g1v0382700.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFMSLICFLGRSVLLHSKLHSRYQSLFRFYSSASSALMFDDYLFDESPKLDTSSQTNMMSVAPVPETNKDLFRLVVRVFK SLSWRVARERRFGSWVETHGFSHSIDSFRIVIHTFALAGMEREVFALLRDIVEYCNEGKYDWSRAFEALLDSPHRVGRSA LVFDVLIKVFASNKMLDHARHVFVSAKHVGHEPDIKSCNFLLKCLTEEANVAEFDVRGFFKELIDTGPLPNIHTYTIMMN FYCGDIGWAKMILGKIYRSGINPTVVTYSTYIRGLCEGGSVEVAQQLVLNLHYKSQPLNTHCFNAVIKGFCQKGAVNEAL EVLEEMEKSGIFPDVYSYSILIETFCNEGDVEKGVVLISEMGRRGINPSIVSYTSLIRGLCKDKQMQAAEEIFRSIGTSG YKYDLTIYEILIDGFCMQGDMDSAIKYLEEMSSSNLAPSPSSYSSLIRGFCKVGLFDKAKEFFGYMLQNGVLPNTITCNH ILRAYCRTGQFREALTLLEEFQENGISLNPYSYNEIIHTICKESPEKALELLPRMLKRNVRPGVVNYSTLISGFAKQLDF KAVKLFIRMVKGGITFNTFTYTILISIFSRSCKMHEAYRIYKEMKEREMRPDQVTYTTLIDGFCNTREMERAYALCQEMS REGCLPNVVTYTCLINGFCKSDRIETATLLFDEMKKARVFPDVKTYTALISWYHKHGDIGLGNKLLDEMKANGISRDVVT YTCLINGFCKSDRIETATLLFDEMKKVRAFPNVKTYTALISWYHKHGNIDRGKELFDEMKENGISPDVVTYTCLIKGFCK SDRIAMAILLFDEMKKVRVFPNVKTYTALIAWYHKHGQIDRKNELFDEMKANGISPDDYI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Phobius | 1 | 21 | 21 | - | – | |
Phobius | 1 | 4 | 4 | - | – | |
Phobius | 5 | 16 | 12 | - | – | |
Phobius | 17 | 21 | 5 | - | – | |
Phobius | 22 | 860 | 839 | - | – | |
PANTHER | 69 | 244 | 176 | 2.4E-216 | – | |
ProSiteProfiles | 104 | 134 | 31 | 5.634 | ||
PANTHER | 129 | 330 | 202 | 2.4E-216 | – | |
Gene3D | 131 | 244 | 114 | 5.1E-13 | ||
ProSiteProfiles | 159 | 193 | 35 | 7.991 | ||
ProSiteProfiles | 194 | 230 | 37 | 7.202 | ||
Gene3D | 245 | 359 | 115 | 3.9E-28 | ||
Pfam | 260 | 288 | 29 | 6.3E-6 | ||
ProSiteProfiles | 264 | 298 | 35 | 7.41 | ||
ProSiteProfiles | 299 | 333 | 35 | 13.241 | ||
Pfam | 299 | 347 | 49 | 1.1E-17 | ||
TIGRFAM | 302 | 335 | 34 | 2.3E-8 | ||
PANTHER | 321 | 479 | 159 | 2.4E-216 | – | |
ProSiteProfiles | 334 | 368 | 35 | 11.915 | ||
TIGRFAM | 336 | 369 | 34 | 3.1E-6 | ||
Gene3D | 360 | 432 | 73 | 9.2E-19 | ||
Pfam | 364 | 394 | 31 | 8.8E-7 | ||
ProSiteProfiles | 369 | 403 | 35 | 10.041 | ||
TIGRFAM | 371 | 404 | 34 | 1.4E-5 | ||
ProSiteProfiles | 404 | 438 | 35 | 11.509 | ||
Pfam | 406 | 452 | 47 | 1.1E-12 | ||
TIGRFAM | 407 | 439 | 33 | 6.9E-7 | ||
SUPERFAMILY | 409 | 543 | 135 | 7.59E-6 | – | |
Gene3D | 433 | 560 | 128 | 3.5E-31 | ||
PANTHER | 438 | 585 | 148 | 2.4E-216 | – | |
ProSiteProfiles | 439 | 473 | 35 | 12.88 | ||
TIGRFAM | 442 | 475 | 34 | 8.9E-9 | ||
PANTHER | 470 | 676 | 207 | 2.4E-216 | – | |
Pfam | 473 | 522 | 50 | 4.6E-12 | ||
ProSiteProfiles | 474 | 508 | 35 | 11.849 | ||
TIGRFAM | 476 | 509 | 34 | 5.1E-8 | ||
ProSiteProfiles | 509 | 542 | 34 | 8.605 | ||
ProSiteProfiles | 543 | 576 | 34 | 6.5 | ||
Pfam | 546 | 574 | 29 | 1.1 | ||
Gene3D | 561 | 676 | 116 | 3.4E-35 | ||
ProSiteProfiles | 577 | 611 | 35 | 12.068 | ||
TIGRFAM | 579 | 612 | 34 | 5.3E-8 | ||
Pfam | 579 | 607 | 29 | 7.0E-6 | ||
Pfam | 611 | 660 | 50 | 2.4E-18 | ||
ProSiteProfiles | 612 | 646 | 35 | 12.529 | ||
TIGRFAM | 614 | 648 | 35 | 1.1E-9 | ||
PANTHER | 642 | 852 | 211 | 2.4E-216 | – | |
ProSiteProfiles | 647 | 681 | 35 | 12.43 | ||
TIGRFAM | 649 | 683 | 35 | 4.1E-9 | ||
Gene3D | 677 | 747 | 71 | 4.4E-19 | ||
Pfam | 681 | 730 | 50 | 7.2E-15 | ||
ProSiteProfiles | 682 | 716 | 35 | 10.161 | ||
TIGRFAM | 685 | 718 | 34 | 8.3E-5 | ||
ProSiteProfiles | 717 | 751 | 35 | 11.849 | ||
TIGRFAM | 719 | 752 | 34 | 1.5E-7 | ||
Gene3D | 748 | 815 | 68 | 1.3E-22 | ||
Pfam | 751 | 800 | 50 | 1.1E-18 | ||
ProSiteProfiles | 752 | 786 | 35 | 13.077 | ||
TIGRFAM | 755 | 788 | 34 | 4.6E-9 | ||
ProSiteProfiles | 787 | 821 | 35 | 12.057 | ||
TIGRFAM | 789 | 823 | 35 | 5.7E-8 | ||
Gene3D | 816 | 860 | 45 | 2.5E-8 | ||
Pfam | 821 | 859 | 39 | 2.7E-9 | ||
ProSiteProfiles | 822 | 856 | 35 | 11.794 | ||
TIGRFAM | 825 | 857 | 33 | 7.1E-5 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi4g1v0382700.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…