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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0403500 |
| Transcript ID | LotjaGi4g1v0403500.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ABC transporter ATP-binding protein; TAIR: AT5G64840.1 general control non-repressible 5; Swiss-Prot: sp|Q9LV93|AB5F_ARATH ABC transporter F family member 5; TrEMBL-Plants: tr|A0A0D2QNC2|A0A0D2QNC2_GOSRA Uncharacterized protein; Found in the gene: LotjaGi4g1v0403500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:78035422..78042015) extracted from Lotus japonicus Gifu genome v1.2.
ATTTCTCTTGTGCTGTAAAAAAAAACTGTTGGTAGTGTTCCATTTCTTGAGACACACTCTTTCTTCTGCTTCTTCACTTC CAACACTGCTCAGCTCAACACAGCAATGGACCTCGCCGCCAAGCTCCACCACCTCACCGCCACACCCAAACCTTCTCTTC ACCCACTCACCAATCGCCCCCTCACTCACACCAACCGCTTCTTCACCCCCAAAAACCCACCCAATTTCGACGCCGCATGT CGTTTATCCGCCGTCACCGCCGAAACGACAACCACGACCCAACAAAACGACGACATCGAGTCCCTCTTCTCCGACACCTC CGTCGAACCCAACAGAAAACGCGGGAAAAACCAATCCCACACTCGCGCCGGCGCTTCGACAGTCTCCTCCGGCGTGAAGC TAGAAAGCATCAGCAAAAGCTACAAGGGTGTCACCGTGTTGAAGAATGTGAGCTGGGAAGTGAAGAAGGGTGAGAAAGTG GGTTTGGTCGGTGTCAACGGCGCCGGGAAAACGACCCAGATGAGGATAATCGCGGGTCAGGAAGACCCGGATTCGGGAAA CGTGATTAAGGCGAACCCGAACATGAAGGTTGCGTTTCTGAGCCAGGAGTTTGAGGTGGCGCCGAGCAGGACGGTGAGGG AGGAGTTTCTGAGCGCTTTCAAGGAGGAGATGGAGATATCTGGGAGGATGGAGAGGGTGCAGAAGGCGCTGGAGGGTGCT GTGGATGATTTGGAGTTGATGGGGAGGCTTTTGGATGAGTTGGATTTGCTTCAGGGAAAGGCTCAGGCGGTGGACTTGGA TGAGGTGGATGCTAAGGTTGATAAGTTGATGCCGGAGCTTGGTTTTGCTCCTGAGGATTCTGAGAGGTTGGTGGCTTCTT TTAGCGGCGGGTGGCAGATGAGGATGTCTCTTGGCAAGATTTTGCTCCAGGTATAATGCATTTCATAGTAATTTTAGCAT ATGATATGATATCAGCAATTGTTACATCATGAAGTGTAGCTTGTTTTGTTGTTTGAGTGAGTGCATTTATGTATGAAAAA TCTTCTACAATTGATTATGGAACCAAAATCAATTATGGGGAGAAGCTTATGTGAGTAGTTTTTGGATTTCAGAAGTGATT CTGAAGAAAGAGAAGTTGATCCAAACTTGCTTAATTGCAATAATAGTTTGTTTTTAGGATGATGTAGCGAAAGCATACAT GTGTGTTTGCCCACTCTATTTTTGGCTTAGTGGAAGAAAAATGTCATTTTATAAACTTCTGCTTCATTGATGAGACATGC CTTTTTGGCTGTACATGCAATGCTTTGTGGCAATTTTAGTAGAGTGTGAATTTAGTTATTTATTTTAAAAAATAGCATAT TGCTAGTCTTGGTAATCCATGTCATAATAGGTATCACATTGTTGTTTGATTCATATAGCCCATCCCCACTTAGTGGAAGA AGACTTTGGTAATAGTAGGTATTTGCTAGCTGATATGTGGTAACTGACTTTCCATGCTCTCTTAGCCCCTGTATTATTTT TCTCTCCTCTTTACTTTATGAAGCTTGCTTGTTTGATTATTTTTTATTTATAACATTTGATACTACAAGATGTACATACT GGTAAAACTTTGGCCGATGCTGGTTTTGGAGTGTTTGAGTGTTCATGAAATGAATGGTGATTTGATTTCATTTTCAGGAC CCAGATTTGTTACTGTTGGATGAGCCTACGAATCACCTTGATCTAGACACCATTGAGTGGCTTGAAGATTATCTTAGCAA GCAGGATGTTCCAATGGTTATCATTTCCCATGACAGGGCTTTTCTTGATCAGCTGTGCACAAAAATTGTGGAAACTGACA TGGGTGTATCCAGGACATTTGAGGGAAACTATTCTCAGTATGTGGTTTCAAAGGCGGCATGGATTGAAGCACAGTTTGCT GCATGGGAGAAGCAACAGAAAGAAATTGAACATACAAAGGGCTTAATAAATAGGCTAGGTGCTGGAGCGAATTCTGGCCG TGCTTCATCTGCTGAGAAGGTATTTGTGATCAGATGAATAGGTCCCAAAGCTGACAGGTCAATTAAATAGCTTAAACTAG TAGTCTCTTAACATGACTTCCTAACAGGAAAATACTGCATCTGCCATGTCCTGACTCTGTTAAATCATTTTAATTATTAT CATTTATGTTTTTGAATTTGTCTTATACACTCCTTGAGTCCATCTCATATTGTACATGTCCCATCACCCATGCCGTATCC ATACTTTCTAGCTTCGTAGCTCTGATGCTTGTGTTTATCATTCAGATTAGCTGCATAAATCCTCACCGTGACTCTAAAAT TTAAAGTTTTAAACTATACTGTTTTCTTGCTCCTCATGTCATTTTCCTAAACCAGTTTCCTTCTATCTGTTATCTGTATG AGAACAGAAGCTAGAGAAACTTCAGGAGGAAGAACTAGTGGAGAAGCCGTTTCAACGGAAACAAATGAAAATCAGGTTCC CTGAGCGTGGAAGAAGTGGGAGATCTGTTGTAACAATAAAGAACTTAGAATATGGCTTTGAGGATACGGTAAGTAAGCAT GCTCTTATTGTTGAACAGTGAGTATCAAATTGTTTATGTTATGTCTATATATATGTACTCATTTTTATTGACACCAGCTG ATGTGATTGTTGTAATGTGGCAGGTGCTTTTCGAAAAGGCAAATCTGGCAATTGAAAGAGGAGAAAAAATTGCCATTATT GGTCCCAATGGATGTGGCAAGAGTACTTTACTGAAATTAATAATGAGTTTACAAAAGCCGGTTGGGGGTGAAGTTATGCT TGGGGAGCATAATGTATTACCTAACTATTTTGAGCAAAATCAGGTTTGTAACCATTGAATGCTAATTATTAATGGAAGTA TGAAACTGATGGTGGTGCTCTTGATTCCAGTTCTTCATGTCAAACCTTTTACATATATAATTTTATTTCTTTCATTTTAC AGGCAGAGGCACTTGATCTGAACAAGACAGTGCTTCAGACAGTAGAAGAAGCTGCAGAGGATTGGAGGATTGATGATATT AAAGGACTTCTTGGGCGTTGTAATTTCAAATCTGATATGCTTGACAGGAAAGTTTCACTATTGAGTGGTGGTGAGAAGGT AAATTGACAATTTGTATTGTTTTTATTTTTTACATGACATTCAATTAGCCTTTGTAAGACCTGTAACACTTACTAGTTAA ACCCATTACATTTTTTTTTATGAACATTGGATTTCAATAATTCTACCATTGAATAGAAAGTTCTCCTGAGATATAAATCA AGGCAGGTCATATTTTTGTTGAATGCTAACATCTTTGCAATGTAATGATAGCTTCAATAGTTTCATTTCAATGCCCTGCC ATTTCTCACTCTCCAACATGATGATACTGTGTTTCTTGTTTCTTTTGTTTTACTAGGCACGCCTGGCATTTTGTAAATTT ATGGTAAAACCATCAACTCTACTTGTGCTAGATGAACCAACCAATCACTTGGATATCCCTTCTAAAGAAATGCTTGAGGT TTGCCTAAAATTTTATCTGTTCTTCTCTTATGTAAATCTCACTATCACTCTATCACCCTAATGATTTCTAATTCCTCTAC CAGGAGGCGATAACCGAGTACCAGGGCACTGTTATCACAGTGTCTCATGATCGATACTTTATAAAGCAGATAGTTAATAG AGTTATAGAAGTCAAAGATGGTGCTTTACAGAATTACGCAGGTGATTACAATGTAAGTGAAATTAACCCCCTGCCTCTGT TCTTTATCTTGGCATTTGGGGTGTTAGTTCTCATTTAGAAAAAAAATGGAATTAGTTGAAATGAGGTAAATGAACTTTTT CAAGATGCAATTAGTCTTAATTGACCATTGGAGCAAAGCTTTCTTAGTTGTTTATTTTAGGCTTTTGAGATGAAACTTAA TATGATTTATTGACATTATTTTGATGTTCATACAACATATATATCTATGTGCTGCATCTTCAATTCTCTTTAGTGAGGTT CTTGTTTGCTTTTCCCCTCTCATTCCTCTCATCTAATTTCAAAATTATGATATGGACAAAGACAAGGTTAAATAGTTTTG AGGGCATAGTTTAGTAAATTGAATTGAATGTCTTTTTGGACAAATATATGAACTGTAATATTTTGGTTTCTTGTCTCATT ATATGTTATCTAATTGTGCACATAATGAATGCAGCATTGTTAATTGTTGCTTGGTTATTACAGGTTTCTAACCCTTAGAT TCTCTAAAATTGCAGTATTACTTAGAGAAGAATCTTGATGCTAGGAATAGAGAGCTTGAACGTGAGGCTGAGCTAGAGGC CAAAGCTCCAAAAGTGAAAGCCAAATCTAAAATGTCCAAGGTAAGCCCTTGTTAGTTACGTTACACCCATTGTTTTGAAA ACGGGATCAGCCGATCCGACCGGTTGAACCCCCGGACAGAATTGATAGGTTAATGATTTAGTGATTTCACTCTATACTTT TGGAGAACTTCCATGATAGTTTGTTAATCATAATTGATTTCTGATAACAGGCTGAGAAAGAAGCAAGGAAGAAACAGAAG ATGCAGGCTTTTCAGGCAGCAAACCAAAAGTCTAAATCTTTGAAAAATGCAAAGAGATGGAATTGAGTAATATATTCCTC AACATCATAGGAGCTTCATCATTACACTAATTTACAATGTATAAAGGTAGATGGGTTGAAGGTGAGGTAGCATATTGAGT GAGCTAGCTACTCAGTATTTGTAGATAGCATATGGATCACTTGACTGGATGTAGCAGCTTAATTATAGCAATTATGATTT CTGGCTTTCTGCAAAAGGTTACTAAGTCACAACTATGATTTGGTTTCTAGGAAGAAACCATGGTAAAAAAAAAAATTTGA CTCCGTGAACTAGGAGAGCATGTTTTCATAGTTGGCCCTATGCGTGGTAAAATGAGGAAGGTTATATTAGGCTTTTAGCA GCCACCGTAAAACTGACTGATATCTTTAATATGGATCTAACGACAGCCATCAGATGATCCATGTAGTCGAGTTCACTTAG TGGGCTAAGGCTTTGTTGTTGTTGTTGGTGAATCAGGAGAGCATCATGGAGTTTCTTTACATAATATGTTACTATTTGGA AACATCCAATATACCTTGTGCTTTTTGACATATGAACTACGAGCGATGAAAAGGAAGCTTTTGCCCCAGTCTGTAGCGTT CTTAGCTAATCTGATTCAGTAGCTTCCTTGTCATAATTCGTAGTTCATAACATTTTTGGATTCACAATAGCTTCTCTTTA AATCACTACTCTCAGTGCGATAACCTTTTAGTAGGTTTTCCAAACGCGCACTAAAGCACTCGCTAGTTGAGGTCGTCCTC TATGGTTTACAACTGGTCTACACTTCCTTAAAATGTTTGTGGTATGATCATGGAAGTACCACACTGGCGCCAATGAACTA ATTTCAATCAAACACAAAATGAAAAATAATGTAAATGAAGTTGGCTAATTTAATGTTAACATAAATAAATTGTTTCATAC AGAGATAGCTATCTCCTCCATCAACATCATTACAATTTTGATCCCCAAAAAGAAAAGGCAAGGTTTTTTATCAAAGTTCT GCTTTAGACTCTTTCTCTGAGTCAGTACCCTCTTTCACCTTTTCTGTTGTCTTATGAATTGCTTCTCCAACAACATTTGC TGCTGATTTAGCAGTTTCCTCAACTGTTTCCTTGCTTCTGTCAAAGCTCTTCCCAACTGCTTCTTTAACATCATGTTCTG TCTCTCCCCCACCCCTGAAACTGAGGGAAAATAAAACACAGCATTACCAACATTGCTATTCATTTTTTTTTTTTTTTGTT GAGCCGAGGGTAATCACTGCTGGCAGCCCATGACTAATCACCTCGAAGCAGAAAACTGCTGACCACAAAATGTGTTTCAT TCTTATAGGCGAGGGTCGAACTCTAACCTCATGGTTAAGGGTCGAGGTGAGCAACCGTCACGCCACACCTCGTGGATTTG TATTCATATTGAAATATCAAAGATAGATATAATAAAAACCAGATCAAATGGGTTACTAATTAAGAGCCTTTTAACTTACT CTAAATTTGGTGGGGAAAACTGCATCTGCAGATCATGTATGACAGTTTTGATTTTCTCCCAGGAACTTTTGTGGGACTTT CTGAGAAGAGAAATGGTGTCCAACAGCACCTTAGAAAGAAGTGGTTTTTCTGGATGATCTTGATCTTGAGCAACATTCTG GCCACCTTCATCAAGTGTTGCAAGCTGGAATTGGAGAATGATCAGAATGCAGAAAAGAAGAAAGAAAAGGGTGGTTCTTC TGAATCTATCCATGGTTATAAGTGACATATTCTTCGAGGTTTCAGAAGATGAGTGGCAAAGGTATATGGCTGGTTTTGGT AGTTACTGGTTTGCAGATTCTGTTCTTGGCTTGGAACACGTACTACCTACGTGGGGCTCGCATCTTGCATGACGTGGTCC TTGAATATTTCAAACATTTTAATTGTACTAATCATTTACCCGAAAACATAAAGATAGAATAATATATTAAACGAATTATT TTCATTAAATTTCGAGTAAATTACATTTCTCAAG
CDS sequence (LotjaGi4g1v0403500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACCTCGCCGCCAAGCTCCACCACCTCACCGCCACACCCAAACCTTCTCTTCACCCACTCACCAATCGCCCCCTCAC TCACACCAACCGCTTCTTCACCCCCAAAAACCCACCCAATTTCGACGCCGCATGTCGTTTATCCGCCGTCACCGCCGAAA CGACAACCACGACCCAACAAAACGACGACATCGAGTCCCTCTTCTCCGACACCTCCGTCGAACCCAACAGAAAACGCGGG AAAAACCAATCCCACACTCGCGCCGGCGCTTCGACAGTCTCCTCCGGCGTGAAGCTAGAAAGCATCAGCAAAAGCTACAA GGGTGTCACCGTGTTGAAGAATGTGAGCTGGGAAGTGAAGAAGGGTGAGAAAGTGGGTTTGGTCGGTGTCAACGGCGCCG GGAAAACGACCCAGATGAGGATAATCGCGGGTCAGGAAGACCCGGATTCGGGAAACGTGATTAAGGCGAACCCGAACATG AAGGTTGCGTTTCTGAGCCAGGAGTTTGAGGTGGCGCCGAGCAGGACGGTGAGGGAGGAGTTTCTGAGCGCTTTCAAGGA GGAGATGGAGATATCTGGGAGGATGGAGAGGGTGCAGAAGGCGCTGGAGGGTGCTGTGGATGATTTGGAGTTGATGGGGA GGCTTTTGGATGAGTTGGATTTGCTTCAGGGAAAGGCTCAGGCGGTGGACTTGGATGAGGTGGATGCTAAGGTTGATAAG TTGATGCCGGAGCTTGGTTTTGCTCCTGAGGATTCTGAGAGGTTGGTGGCTTCTTTTAGCGGCGGGTGGCAGATGAGGAT GTCTCTTGGCAAGATTTTGCTCCAGGACCCAGATTTGTTACTGTTGGATGAGCCTACGAATCACCTTGATCTAGACACCA TTGAGTGGCTTGAAGATTATCTTAGCAAGCAGGATGTTCCAATGGTTATCATTTCCCATGACAGGGCTTTTCTTGATCAG CTGTGCACAAAAATTGTGGAAACTGACATGGGTGTATCCAGGACATTTGAGGGAAACTATTCTCAGTATGTGGTTTCAAA GGCGGCATGGATTGAAGCACAGTTTGCTGCATGGGAGAAGCAACAGAAAGAAATTGAACATACAAAGGGCTTAATAAATA GGCTAGGTGCTGGAGCGAATTCTGGCCGTGCTTCATCTGCTGAGAAGAAGCTAGAGAAACTTCAGGAGGAAGAACTAGTG GAGAAGCCGTTTCAACGGAAACAAATGAAAATCAGGTTCCCTGAGCGTGGAAGAAGTGGGAGATCTGTTGTAACAATAAA GAACTTAGAATATGGCTTTGAGGATACGGTGCTTTTCGAAAAGGCAAATCTGGCAATTGAAAGAGGAGAAAAAATTGCCA TTATTGGTCCCAATGGATGTGGCAAGAGTACTTTACTGAAATTAATAATGAGTTTACAAAAGCCGGTTGGGGGTGAAGTT ATGCTTGGGGAGCATAATGTATTACCTAACTATTTTGAGCAAAATCAGGCAGAGGCACTTGATCTGAACAAGACAGTGCT TCAGACAGTAGAAGAAGCTGCAGAGGATTGGAGGATTGATGATATTAAAGGACTTCTTGGGCGTTGTAATTTCAAATCTG ATATGCTTGACAGGAAAGTTTCACTATTGAGTGGTGGTGAGAAGGCACGCCTGGCATTTTGTAAATTTATGGTAAAACCA TCAACTCTACTTGTGCTAGATGAACCAACCAATCACTTGGATATCCCTTCTAAAGAAATGCTTGAGGAGGCGATAACCGA GTACCAGGGCACTGTTATCACAGTGTCTCATGATCGATACTTTATAAAGCAGATAGTTAATAGAGTTATAGAAGTCAAAG ATGGTGCTTTACAGAATTACGCAGGTGATTACAATTATTACTTAGAGAAGAATCTTGATGCTAGGAATAGAGAGCTTGAA CGTGAGGCTGAGCTAGAGGCCAAAGCTCCAAAAGTGAAAGCCAAATCTAAAATGTCCAAGGCTGAGAAAGAAGCAAGGAA GAAACAGAAGATGCAGGCTTTTCAGGCAGCAAACCAAAAGTCTAAATCTTTGAAAAATGCAAAGAGATGGAATTGA
Protein sequence (LotjaGi4g1v0403500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDLAAKLHHLTATPKPSLHPLTNRPLTHTNRFFTPKNPPNFDAACRLSAVTAETTTTTQQNDDIESLFSDTSVEPNRKRG KNQSHTRAGASTVSSGVKLESISKSYKGVTVLKNVSWEVKKGEKVGLVGVNGAGKTTQMRIIAGQEDPDSGNVIKANPNM KVAFLSQEFEVAPSRTVREEFLSAFKEEMEISGRMERVQKALEGAVDDLELMGRLLDELDLLQGKAQAVDLDEVDAKVDK LMPELGFAPEDSERLVASFSGGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEDYLSKQDVPMVIISHDRAFLDQ LCTKIVETDMGVSRTFEGNYSQYVVSKAAWIEAQFAAWEKQQKEIEHTKGLINRLGAGANSGRASSAEKKLEKLQEEELV EKPFQRKQMKIRFPERGRSGRSVVTIKNLEYGFEDTVLFEKANLAIERGEKIAIIGPNGCGKSTLLKLIMSLQKPVGGEV MLGEHNVLPNYFEQNQAEALDLNKTVLQTVEEAAEDWRIDDIKGLLGRCNFKSDMLDRKVSLLSGGEKARLAFCKFMVKP STLLVLDEPTNHLDIPSKEMLEEAITEYQGTVITVSHDRYFIKQIVNRVIEVKDGALQNYAGDYNYYLEKNLDARNRELE REAELEAKAPKVKAKSKMSKAEKEARKKQKMQAFQAANQKSKSLKNAKRWN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 24 | 24 | - | – | |
| PANTHER | 33 | 666 | 634 | 0.0 | – | |
| PANTHER | 33 | 666 | 634 | 0.0 | – | |
| MobiDBLite | 54 | 71 | 18 | - | – | |
| MobiDBLite | 54 | 94 | 41 | - | – | |
| Gene3D | 94 | 377 | 284 | 6.4E-64 | – | |
| CDD | 97 | 327 | 231 | 6.31495E-36 | – | |
| ProSiteProfiles | 97 | 355 | 259 | 18.788 | ||
| SUPERFAMILY | 98 | 332 | 235 | 2.58E-47 | ||
| Pfam | 112 | 287 | 176 | 1.5E-25 | ||
| SMART | 121 | 336 | 216 | 2.4E-11 | ||
| ProSitePatterns | 259 | 273 | 15 | - | ||
| Pfam | 326 | 413 | 88 | 1.4E-20 | ||
| Gene3D | 386 | 654 | 269 | 1.4E-61 | – | |
| SUPERFAMILY | 404 | 628 | 225 | 8.51E-47 | ||
| CDD | 424 | 615 | 192 | 1.27928E-57 | – | |
| ProSiteProfiles | 424 | 639 | 216 | 18.508 | ||
| Pfam | 441 | 571 | 131 | 1.7E-25 | ||
| SMART | 448 | 616 | 169 | 1.9E-11 | ||
| ProSitePatterns | 543 | 557 | 15 | - | ||
| Coils | 629 | 649 | 21 | - | – | |
| MobiDBLite | 644 | 670 | 27 | - | – | |
| MobiDBLite | 644 | 691 | 48 | - | – | |
| Coils | 651 | 680 | 30 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. |
Expression pattern of LotjaGi4g1v0403500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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