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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0410100 |
| Transcript ID | LotjaGi4g1v0410100.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ABC transporter G family member; TAIR: AT2G13610.1 ABC-2 type transporter family protein; Swiss-Prot: sp|Q9SIT6|AB5G_ARATH ABC transporter G family member 5; TrEMBL-Plants: tr|G7LE38|G7LE38_MEDTR White-brown-complex ABC transporter family protein; Found in the gene: LotjaGi4g1v0410100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:78619491..78621536) extracted from Lotus japonicus Gifu genome v1.2.
AAAAGAGAGGAAGAGGAAGAGCCAAATAATGAGTTTGGGAATTAGAAGGGAGTAGAAGAAGAAACATAGAGAAACAAACA CAGAGAAAAAAGAGCTATTCAAATGAAGGTGCAAGAAGGGTGTGAGGTTGAGGCCATTAGCATCAACTACAAGATTCACA CACACAAAACAGATCACCCTTTTAAAGTCTTCAACAAATCCCCACAAAAAGGAGATGATCAAGGACCAGAAGAGGAAGCA AAAGGTGAAAAAAGTTGCAGTGGAGTTAAGCATGTTCTCAAGAATGTGAGTTTCCAGGCCAGGCCATGGGAAATCCTAGC CATTGTTGGTCCAAGTGGAGCTGGAAAATCTTCACTGCTTGAGATCCTTGCTGGTAAACACAGTCCACACAGTGGAACTG TGTTGGTGAACCACAAGCCTGTGGACAAAGCTCAGTTCAAAAAGCTTTCAGGGTATGTTACACAGAAGGACACTTTGTTC CCTTTGCTTACAGTTGAAGAAACCATGATGTTCAGTGCAAAGCTAAAGCTAAAGCTTCCACCAGAGCAACTTCACTCCAG GGTGAAGTCACTGATTCAGGAGCTTGGGCTTGACCATGTTGCTGGAACCAGAATTGGTGACGAAAGGGTCAGAGGTATAT CTGGTGGAGAGAGGAGAAGAGTGTCTATTGGTGTTGAAGTGATACATGATCCAAGAGTGCTGATTCTTGATGAACCAACT TCAGGGTTGGATAGTTCCTCTGCTCTGCAAATTCTTGACATGCTTAAGGTCATGGCTGAGACTAGGGGCAGAACCATAAT CCTTAGTATCCATCAACCTGGGTTCAGAATTGTGAAGCTGTTCAGTTCATTGTTGTTGTTAGCCAATGGCTCTGTGTTGC ACCATGGCAGTGCAGATTTGCTTGGTGTGAATCTGAGATTGATGGGTCTAGAGCTTCCCCTGCATGTTAATGTGGTTGAA TTTGCCATTGACTCCATTGAAACCATTCAGGAACAGGAAATATGTGAGGTGGTTCAGCCAAGGCAATTGCTAGGGACAGT TCAGCAGAAGAAAGGTGATCATGATGAACAACAACCAGCTGAGGCTAAAACTAAGAGTGGTAAGTTCACACTGCAGCAGC TTTTTCAACAATCCAAGGTAATTGATGAGGAAACAATCAATGCTGGAGTGGATTATTCTTGTGATTTTGCAAATTCTAGA TTTAGAGAAACTATGATTCTCACTCATAGGTTCTCCAAAAACATCTTTCGTACAAAAGAGCTCTTTGCATGTAGAACAAT TCAGATGCTGATTGCTGGGCTTGTTTTGGGGTCCATCTTTTGTAACCCCATGGATGGTATAGAAGGAGTAGCAGAAAGGG TGGGTCTATTTGCTTTCATATTAACTTTTTTGTTGTCAAGCAGCATAGAAGCTCTACCTATTTTTCTGCAAGAAAAGGAG ATTCTAATGAAGGAAACTTCTAGTGGAAGCTACAGGGTCTCATCCTATGCTATTGCCAATGGCCTAGTTTACTTGCCATT TCTTCTGATCCTGGCCATTTTGTTCACAGTGCCATTATACTGGCTTGCTGGGCTCAACAAAAATTTCATGGCTTTTCTGC ACTTTTTGCTGCTGATATGGCTGATTCTCTACACAGCAAATTCAGTTGTGGTGTGTTTCAGTGCTTTGGTGCCTAATTTC ATTGTTGGGAATTCAGTGATTGCTGGTGTTATAGGGTCTTTCTTCTTGTTCTCAGGATACTTCATATCAAAGAATGAGAT TCCTAATTACTGGGTTTTCATGCATTATATATCTCTGTTTAAGTATCCCTTTGAAGGGTTTCTGATCAATGAGTTCTCCA AGTCAGGGAAGTGCCTGAGTTACATGTTTGGGGAATGTGTGATGACGGGTGAGGATGTGCTCAAAAAAGAAGGTTATGGA GGAGAGAGCAGTAGATGGAAGAATGTTGGAGTCACTGTGTGCTTCATCTTTTTTTACAGGTTCATTTCTTACATCATTCT AAGATACAAATGTTCACAGAGAGGGTTGTCATCATCTAAACTCTAA
CDS sequence (LotjaGi4g1v0410100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGGTGCAAGAAGGGTGTGAGGTTGAGGCCATTAGCATCAACTACAAGATTCACACACACAAAACAGATCACCCTTT TAAAGTCTTCAACAAATCCCCACAAAAAGGAGATGATCAAGGACCAGAAGAGGAAGCAAAAGGTGAAAAAAGTTGCAGTG GAGTTAAGCATGTTCTCAAGAATGTGAGTTTCCAGGCCAGGCCATGGGAAATCCTAGCCATTGTTGGTCCAAGTGGAGCT GGAAAATCTTCACTGCTTGAGATCCTTGCTGGTAAACACAGTCCACACAGTGGAACTGTGTTGGTGAACCACAAGCCTGT GGACAAAGCTCAGTTCAAAAAGCTTTCAGGGTATGTTACACAGAAGGACACTTTGTTCCCTTTGCTTACAGTTGAAGAAA CCATGATGTTCAGTGCAAAGCTAAAGCTAAAGCTTCCACCAGAGCAACTTCACTCCAGGGTGAAGTCACTGATTCAGGAG CTTGGGCTTGACCATGTTGCTGGAACCAGAATTGGTGACGAAAGGGTCAGAGGTATATCTGGTGGAGAGAGGAGAAGAGT GTCTATTGGTGTTGAAGTGATACATGATCCAAGAGTGCTGATTCTTGATGAACCAACTTCAGGGTTGGATAGTTCCTCTG CTCTGCAAATTCTTGACATGCTTAAGGTCATGGCTGAGACTAGGGGCAGAACCATAATCCTTAGTATCCATCAACCTGGG TTCAGAATTGTGAAGCTGTTCAGTTCATTGTTGTTGTTAGCCAATGGCTCTGTGTTGCACCATGGCAGTGCAGATTTGCT TGGTGTGAATCTGAGATTGATGGGTCTAGAGCTTCCCCTGCATGTTAATGTGGTTGAATTTGCCATTGACTCCATTGAAA CCATTCAGGAACAGGAAATATGTGAGGTGGTTCAGCCAAGGCAATTGCTAGGGACAGTTCAGCAGAAGAAAGGTGATCAT GATGAACAACAACCAGCTGAGGCTAAAACTAAGAGTGGTAAGTTCACACTGCAGCAGCTTTTTCAACAATCCAAGGTAAT TGATGAGGAAACAATCAATGCTGGAGTGGATTATTCTTGTGATTTTGCAAATTCTAGATTTAGAGAAACTATGATTCTCA CTCATAGGTTCTCCAAAAACATCTTTCGTACAAAAGAGCTCTTTGCATGTAGAACAATTCAGATGCTGATTGCTGGGCTT GTTTTGGGGTCCATCTTTTGTAACCCCATGGATGGTATAGAAGGAGTAGCAGAAAGGGTGGGTCTATTTGCTTTCATATT AACTTTTTTGTTGTCAAGCAGCATAGAAGCTCTACCTATTTTTCTGCAAGAAAAGGAGATTCTAATGAAGGAAACTTCTA GTGGAAGCTACAGGGTCTCATCCTATGCTATTGCCAATGGCCTAGTTTACTTGCCATTTCTTCTGATCCTGGCCATTTTG TTCACAGTGCCATTATACTGGCTTGCTGGGCTCAACAAAAATTTCATGGCTTTTCTGCACTTTTTGCTGCTGATATGGCT GATTCTCTACACAGCAAATTCAGTTGTGGTGTGTTTCAGTGCTTTGGTGCCTAATTTCATTGTTGGGAATTCAGTGATTG CTGGTGTTATAGGGTCTTTCTTCTTGTTCTCAGGATACTTCATATCAAAGAATGAGATTCCTAATTACTGGGTTTTCATG CATTATATATCTCTGTTTAAGTATCCCTTTGAAGGGTTTCTGATCAATGAGTTCTCCAAGTCAGGGAAGTGCCTGAGTTA CATGTTTGGGGAATGTGTGATGACGGGTGAGGATGTGCTCAAAAAAGAAGGTTATGGAGGAGAGAGCAGTAGATGGAAGA ATGTTGGAGTCACTGTGTGCTTCATCTTTTTTTACAGGTTCATTTCTTACATCATTCTAAGATACAAATGTTCACAGAGA GGGTTGTCATCATCTAAACTCTAA
Protein sequence (LotjaGi4g1v0410100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKVQEGCEVEAISINYKIHTHKTDHPFKVFNKSPQKGDDQGPEEEAKGEKSCSGVKHVLKNVSFQARPWEILAIVGPSGA GKSSLLEILAGKHSPHSGTVLVNHKPVDKAQFKKLSGYVTQKDTLFPLLTVEETMMFSAKLKLKLPPEQLHSRVKSLIQE LGLDHVAGTRIGDERVRGISGGERRRVSIGVEVIHDPRVLILDEPTSGLDSSSALQILDMLKVMAETRGRTIILSIHQPG FRIVKLFSSLLLLANGSVLHHGSADLLGVNLRLMGLELPLHVNVVEFAIDSIETIQEQEICEVVQPRQLLGTVQQKKGDH DEQQPAEAKTKSGKFTLQQLFQQSKVIDEETINAGVDYSCDFANSRFRETMILTHRFSKNIFRTKELFACRTIQMLIAGL VLGSIFCNPMDGIEGVAERVGLFAFILTFLLSSSIEALPIFLQEKEILMKETSSGSYRVSSYAIANGLVYLPFLLILAIL FTVPLYWLAGLNKNFMAFLHFLLLIWLILYTANSVVVCFSALVPNFIVGNSVIAGVIGSFFLFSGYFISKNEIPNYWVFM HYISLFKYPFEGFLINEFSKSGKCLSYMFGECVMTGEDVLKKEGYGGESSRWKNVGVTVCFIFFYRFISYIILRYKCSQR GLSSSKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 387 | 387 | - | – | |
| PANTHER | 3 | 639 | 637 | 7.2E-299 | – | |
| PANTHER | 3 | 639 | 637 | 7.2E-299 | – | |
| MobiDBLite | 25 | 52 | 28 | - | – | |
| ProSiteProfiles | 43 | 280 | 238 | 21.562 | ||
| Gene3D | 47 | 270 | 224 | 4.0E-57 | – | |
| CDD | 49 | 262 | 214 | 1.10054E-72 | – | |
| SUPERFAMILY | 56 | 265 | 210 | 2.66E-49 | ||
| Pfam | 59 | 207 | 149 | 1.7E-31 | ||
| SMART | 68 | 257 | 190 | 3.6E-9 | ||
| ProSitePatterns | 179 | 193 | 15 | - | ||
| Pfam | 370 | 578 | 209 | 7.0E-42 | ||
| TMHMM | 387 | 405 | 19 | - | – | |
| Phobius | 388 | 406 | 19 | - | – | |
| Phobius | 407 | 420 | 14 | - | – | |
| TMHMM | 420 | 442 | 23 | - | – | |
| Phobius | 421 | 442 | 22 | - | – | |
| Phobius | 443 | 462 | 20 | - | – | |
| TMHMM | 463 | 485 | 23 | - | – | |
| Phobius | 463 | 489 | 27 | - | – | |
| Phobius | 490 | 494 | 5 | - | – | |
| Phobius | 495 | 519 | 25 | - | – | |
| TMHMM | 495 | 517 | 23 | - | – | |
| Phobius | 520 | 525 | 6 | - | – | |
| Phobius | 526 | 548 | 23 | - | – | |
| TMHMM | 526 | 548 | 23 | - | – | |
| Phobius | 549 | 614 | 66 | - | – | |
| Phobius | 615 | 633 | 19 | - | – | |
| TMHMM | 615 | 633 | 19 | - | – | |
| Phobius | 634 | 647 | 14 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. |
Expression pattern of LotjaGi4g1v0410100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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