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LotjaGi4g1v0415800.1

Overview

Field Value
Gene ID LotjaGi4g1v0415800
Transcript ID LotjaGi4g1v0415800.1
Related isoforms 4
Lotus japonicus genome version Gifu v1.2
Description Ferrochelatase; TAIR: AT2G30390.1 ferrochelatase 2; Swiss-Prot: sp|Q0DIV0|HEMH2_ORYSJ Ferrochelatase-2, chloroplastic; TrEMBL-Plants: tr|G7LGG4|G7LGG4_MEDTR Ferrochelatase; Found in the gene: LotjaGi4g1v0415800
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:79133249..79139589) extracted from Lotus japonicus Gifu genome v1.2.

CCAAACCAAACCAGTCCATTAGGCAAAACCCAAAAAAATAATAATAATAAGAAAAAAAATAAAAGAAAAAAAGAAAAGAA AAAATGAATATTTACATGGTCTTCATTCACAGTTCATCCTCTACTAGTGCTGGCTCCTTCTCTTCCAAGTTTATGGGAAT TTGGTAAAGTTGGTTTCTTTTCTGTAAATTGAATTCTGGGTTGTGTTCTTTGAGGCTTGAATTTTCTTGCTAATGGCTTA AAACATGATTTAGTGCAGAACCAGAAGGACAAGTAAAGTTGTGAAAGTGCTTTTGCAAGCTAGCTATGAATTCTGCAATT CATGCACCGTCTTCGCCTTCATCTTCTTCTTGCTCCTACATTCGTCCTCTTCCATGCATCACTTGTGCTTCTCGTAATTT CAAGTTTCCTATGTAAGTGTTTGTTTTACAGTGATTATGTTCTGTTCTGGATTTTTCAGTAACTTGCTCTTATCTTAGTT TTTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGTTCAAGAGTGTGCTTATTTCTTGTTTGAGGTTTAGTTGTTTGGAT TTGAAGATGGAGTTACTTAAGCACCATATTATGATTTCTAACATCTGAACTAGTGGCCTTAGCTATTATAAGATGGATTT TCAGCTTCAGGTGTTGATCATGAAAGTACAATTTTCTTCATTTTTTAATGGCATTAATGGGGGGGGGGGGGGGGTGAAAG CTGCATTCTATGGTCTGATATGCATTTCTATAAGGTTTTGGTTTTTATGACAAACTTCCAATTTTAGAATGAATTATTCA TATGTTTTGAATTGTTGGTTGTGAATGCTATTTCAGGGAAACTATTCCTTTATTTTAAAAATATGTGAAGATTTTCCTAA ATCTAAATCCAACTTTATTTTAGTAAACTGGAGTTATAATATTTCAACTACCCTTGGTTAGCTCTCAAGTTCTGGGACTG TAGATTTTGTATTTTAAGCGGACACGGGCAAACATGATCCAAACTTGTGTTCCACTCTTTTCCTTGTCTTCCTGTAGCTG TGAAGTGCTGCACTATCATCCAAGTGCTTTCATGTATCAATTTTCTTTCCAGTTGTGCATCCAAGCATTTGTCTTGTCTT TCTAAATTTGCATGTGATGTATGCAAAGATATGACTTCAATTTGCTTGTTCAAATTTGTTAATATTTATGGTTTCACCGT AATACAAAACATACACTTTACTTCTTCATCATGTTAAATTGTGTTTTTTCTTGTATCATGACTATTTTATCACAAAATTT TAGTGGAGTTTTCCAGTGCTTTTAACATCCTTTATTTTCGAAGGCTGTTGCCGCAGGCAACATGTACCACTCAAAAGATG CATCGCTGCTCTGGAGGCAACATGGAAGCTTCTACTAACCCTAGTCCATTGAAAAATTGTATAGTTGGCAAATATAATCC AGGATGGTCTGAAACACAACCCTTGTTTTCCAAGCAATCACTCAACAGACACTTGTTGCCAGTGGAAGCTCTAGTCACTC CAACTGCTCAAGATGTATCTGATACACCTTTTCTTGGTGATGATAAGATTGGAGTGTTACTGTTAAACCTTGGAGGTCCA GAGACTCTAGACGATGTGCAGCCTTTTTTGTTCAATCTTTTTGCTGATCCAGTAATTCTCTAGCTTTAGCTAACTGTTAT CCTTTTTATCACTAACTTGTTTAGGTTTAGATAACCTTAAACTTTCAATTTCTGATTCTTATTTATGTCCAGTTATATTT TATGTACATTCCTGCCAGTTTTCTGGTTTATGAGGAAAACTTTGAATTTCTTATGCTTTGATTGTTACTTATGTTTTCCG TACAATTTTGCAGGATATTATTCGTTTGCCAAGGTTATTTGGTTTTCTTCAAAAGCCATTGGCCCAGTTTGTGTCTGTTT TAAGGGCACCAAAGAGCAAAGAAGGCTATGCTTCAATTGGTGGTGGTTCCCCCCTTAGACGTATGACTGATGCTCAGGCA TGGCACTTCCTGTCCTGCTAACAGATATTATTGCATATATTTCACTTCCAACTGTTTGATAGTTCTTTAGAGACTTAAAA TTTAAATTTATCAGATATTGAATTGGTTATGTATGAGATAGAGAGGTCTTGAGCTCTTTATATATGTATCTAGTGTATAT AATTGATATCTTGTATCCATTTTAAGTTTTAGGAATAAAATAAGCAAATTGGTTGATGGCAAAGAAGTTATGGATCTCTT TGAGAAAGTCAGTCTTTTGCATAACAAATTTTCTGCACAATAGAAGTTAAGAAGTTAGAACTGTTTCATGTAGGCAGACA TATTGTTTCAACAGGAAATTTAAAGTTACCAGATTGTAGAATTTTTATAGTCTTCTCATGTAATTAATGTTTTTCCAACC ATTTCAAGCCAAATTTTAAAATTTTCACTAGTTCATTGAGATTTTACGATCAGCATGTTATATTTTTTCTAATGTTTTTA AATGCTTTTTAATGCTACACAATATGCTTTGGGGTACATAACATGTCCACTCCATAAAATTATTCCTTTTGTTGTTTTAA CTCTCTTATTGTTCTTGCTCCGTTGATGATCTAACAGGCTGAAGAGTTGAGAAAATGTCTTTGGGAAAAAAATGTCCCAG CCAATGTGTATGTTGGAATGCGTTACTGGCATCCATTCACCGAAGAGGCTATTGAGCAGGTCTTGCATCATATTGTTCTT AGAATACAATGTGAAATTGGTTAGCATTTGATTAAGATGATGCCACTCGTAATGACATATTTTACAATTTTCAAGAGGAT GTCATCTGATTTCTCTGATTAGTTGTATATAAATGCATGGCAGCCTTTAGAACTGTTTTGAAAATATAAAATCTGTTTTA AAGGGTGGTTTGCAAGAAACAGTTGCTATGTTACTTATCAAATATATGCAGTCTTACTGGTTATCTTATTGAAAAAACTT TTACCCTTGAACTAACTCGTGGGTGAACTAATTCTTTTGAAATTAGTTGATATAATTTTATATTCCATTTGTCTATCTGT GATTATTCATTTTTCCTTTGAAATATAACATGTAGATTAAAAGGGATGGAATCACAAAGCTTGTTGTGCTTCCACTTTAT CCACAATTTTCAATTTCAACCAGCGGCTCAAGTCTGCGTCTCTTGGAGAGTATATTCCGGTGATTACTATAAAAATGAAC TGTTATCACATCATTATGTTCCATTCTATCATCTAACATTCGGTAATGTTATGAATTGTTTTTGGTTCTTTAGAGAGGAT GAGTATCTAGTCAACATGCAGCACACGGTAATACCTTCATGGTACCAGCGTGAAGGATACATAAAGGCCATGGTAAATTT AATTGAAAAAGAGCTAAAGGGTTTTGACTGCCCTGAGAAGGTACCACTTCTTTTTGTGTAAATGACAGAGATGGTTCTTA AACATTTTTATCTTATCATTGTTACTCTTCTTCTCCAAATGTTAGGATAATGCAATGGTGATGGTAAGAGTAACTTACTC GACTAACTAATGAGCATTGCAATGGTAACTTTAGTTTCAAAAAAAGAAATGGAAGGACTTACCTATATTGTGGGATTTAA ATGCAAGTGAAGAATTATTTGGGGATCAAAATCACATATTAGCCATAGTGGAGGGGCTGAAAGTGCAATTAAAACTCATT TTCTCTTATTTTGGCATTGCTTATAAAGTTTTTCCTGAACTTTGAGTTCCCTTAAGATTGAGGTTGCAGGTCACGTTTCT GTAAATATATGTTCTTACTCCTAGTGACTGATGCACGTTGCAGGTCATGATATTCTTTAGTGCGCATGGGGTGCCACTTG CTTATGTAGAAGAGGCTGGTGATCCATACAAGGCAGAGATGGAGGAATGCGTAGATTTGATCATGGAAGAGCTTGAGAGA AGAAAGATAACTAATGCATACACCCTTGCTTATCAGGTAGTCTTTTTTTATAATAAAATTGCTCATCCTCGCTCTCTAGT TTAAAAGTATTAATACATGATATTGATTTATAAAAAAGGCACCAAGTACTGAGGTGTGTATGGTACAATCAGAGAGTTCT CTTTGAAAAATATGGATCCGAGTTTGAAGAAGGGGAAAGAGTCCTTGACCCGGAAAAGATATAGGAGGATTTATCCAATC ACATAGTTTGGGCTCCTAGAATATGGTGCCCATAGGGCTTTCTATTTGATTTTATCGAAAGGCCCATTGAATTGGGATTT CCCTATTGGGCCAGGTCATTTCAGGGCAAGCGGATCATTTATGATAAAGAGTATGAGCTTCAAGAGAATGATTCGGAGTT CTTGCAGGGTGGAACCATGCAGTACAACATATATCAAGAGGGCAACTCTATCTTTCGAAAAGTGAACATTTTTGTCAAGA ATGGGAATTTTCCAGCATAAGAAAGTCAATGTCTAGACTCTGGAGTGAGACTTCTTTTCAGCTTATGTATAAAGTACAGC CAGTATAGTCCTCACCAAAGTTACCATTGGGGTTTCTCTATCAACTAGGCAATAATATTCCTAACAGTTTGTGTGATTCA CCTGTTATTGCATAAAGAAACCTCTTTGCAATAAAACGCTCCTCTTTGATAGGGATCTCAGGGAACCCCGCGGAGAACTG ATCCCTATGCAATTAATCTGTACCAATCTCTTCCTACTTCCAAACCTGACTACTGCTTTTAGATACATCCTTTTACAAAT TTTCTAACAATTGACCATGATTCTTGTTACAGAGTAGAGTTGGACCTGTGGAATGGTTAAAACCCTACACCGATGACACA ATAGTTGAACTTGGGAAAAACGGAGTAAAAAGTCTGCTGGCTGTGCCAATTAGGTAACACCAGCCTTCCTTGTTAATGAT TTTAGTTCACTTCTATCTGTTCAGTGGCTGCCTTCTTTCTCCCTATCTGTCTCAAACCAACACAGTGAACAAGTGAGACG AGCATTTTTTCCTATTCTCTTCACAGCTTTGTCAGCGAACATATTGAAACTCTTGAAGAAATTGATGTTGAATACAAAGA GTTGGCTCTAGAATCCGGTATAGAAAAATGGGGTCGTGTTCCTGCACTGGGATGTGAACCCACATTCATTTCAGATTTAG CAGATGCTGTAATTGAGAGCCTTCCATATGTTGGTGCAATGGCAGTTTCAAACCTTGAAGCTCGACAGGTATTCTTCTCA ACTCATATGTATATTTTTCTATTCTAGAAGTACACACTTTCCAAGTCAGGGAACTGTTGATATCAAATTATAAATTGAGT CATATTAGTTTATATAGATACTGTATTCTGTAGTTTCATACTTTCTTTGTGTGATCTAACAGAAAGTTTTGGCTCTTTGG CAGTCTTTGGTTCCCCTTGGAAGTGTAGAAGAATTATTGGCGGCATATGACTCGCAGCGTAGGGAGTTGCCGCCACCAGT ACTGGTGTGGGAATGGGGGTGGACAAAAAGTGCTGAAACTTGGAATGGAAGAGCAGCTATGCTTGCTGTGCTTCTTCTGT TGTTTTTAGAAGTCACCACTGGTGAAGGATTTTTGCACCAGTGGGGAATATTGCCCTTGTTTAGGTGAATGAGTCCTCCA CTGCCCTCAATTGCAGTGGAATATAGTTTTGCATGTATATGTATACCATTAGCATCACATGTGCCCCTTAAGATATAAGG TTTGCACTCGGGAGTTCTCAAATTTAATACATGTTTGGAAACCCTTCTACTATTGATTCTGACGGCAGAATCAATTATGG GAAGAAGCTTTTGTGAGTAGCTTCTAGTCTGATGAAAAAGAAGCTAATCCAAACATGCTTTTAGTTTAGACATAGCATTT GTGGATGGAGTCGAGATAAAAATAATGTATAGTGACTTCCTCTTATGTGTATCTGAAGCATTTTTACTTGGGTTTCATTA CACCTGATAGGTGTTACCTGAAAATAGCAGTTGTTCACATACCATGATACCAACATTCACACGCATAATAGTCTCCACTT CATTTCCACTTCCCTTTTCTCTTTCTCTTTCTTCTCTTTCAATCACATCACATATCACATTCTTTCTAAATCGGTGTTGT TCTTACACTTGGGTTTCATGCACATCACATATCACTATCTCATTTACAAACACGCTCTTGACAGAAGTTTTTTCAATATG AAAATATTAAATACTAATAATGGTAGTTTTCCAAGATAGGCTTAAGGTTTTCAAAAATAGTAAGAATTTGTAAAAAGTTG TGTTTTTTTAGTTGTACTTTTCAGTAAATAACTTCCATTGCATGATTTATTAGCTGGTGTCTTTAGATCATTCAAAATCG TCATTGAGTAATTTAAAAGAG
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0415800.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAATTCTGCAATTCATGCACCGTCTTCGCCTTCATCTTCTTCTTGCTCCTACATTCGTCCTCTTCCATGCATCACTTG TGCTTCTCGTAATTTCAAGTTTCCTATGCTGTTGCCGCAGGCAACATGTACCACTCAAAAGATGCATCGCTGCTCTGGAG GCAACATGGAAGCTTCTACTAACCCTAGTCCATTGAAAAATTGTATAGTTGGCAAATATAATCCAGGATGGTCTGAAACA CAACCCTTGTTTTCCAAGCAATCACTCAACAGACACTTGTTGCCAGTGGAAGCTCTAGTCACTCCAACTGCTCAAGATGT ATCTGATACACCTTTTCTTGGTGATGATAAGATTGGAGTGTTACTGTTAAACCTTGGAGGTCCAGAGACTCTAGACGATG TGCAGCCTTTTTTGTTCAATCTTTTTGCTGATCCAGATATTATTCGTTTGCCAAGGTTATTTGGTTTTCTTCAAAAGCCA TTGGCCCAGTTTGTGTCTGTTTTAAGGGCACCAAAGAGCAAAGAAGGCTATGCTTCAATTGGTGGTGGTTCCCCCCTTAG ACGTATGACTGATGCTCAGGCTGAAGAGTTGAGAAAATGTCTTTGGGAAAAAAATGTCCCAGCCAATGTGTATGTTGGAA TGCGTTACTGGCATCCATTCACCGAAGAGGCTATTGAGCAGATTAAAAGGGATGGAATCACAAAGCTTGTTGTGCTTCCA CTTTATCCACAATTTTCAATTTCAACCAGCGGCTCAAGTCTGCGTCTCTTGGAGAGTATATTCCGAGAGGATGAGTATCT AGTCAACATGCAGCACACGGTAATACCTTCATGGTACCAGCGTGAAGGATACATAAAGGCCATGGTAAATTTAATTGAAA AAGAGCTAAAGGGTTTTGACTGCCCTGAGAAGGTCATGATATTCTTTAGTGCGCATGGGGTGCCACTTGCTTATGTAGAA GAGGCTGGTGATCCATACAAGGCAGAGATGGAGGAATGCGTAGATTTGATCATGGAAGAGCTTGAGAGAAGAAAGATAAC TAATGCATACACCCTTGCTTATCAGAGTAGAGTTGGACCTGTGGAATGGTTAAAACCCTACACCGATGACACAATAGTTG AACTTGGGAAAAACGGAGTAAAAAGTCTGCTGGCTGTGCCAATTAGCTTTGTCAGCGAACATATTGAAACTCTTGAAGAA ATTGATGTTGAATACAAAGAGTTGGCTCTAGAATCCGGTATAGAAAAATGGGGTCGTGTTCCTGCACTGGGATGTGAACC CACATTCATTTCAGATTTAGCAGATGCTGTAATTGAGAGCCTTCCATATGTTGGTGCAATGGCAGTTTCAAACCTTGAAG CTCGACAGTCTTTGGTTCCCCTTGGAAGTGTAGAAGAATTATTGGCGGCATATGACTCGCAGCGTAGGGAGTTGCCGCCA CCAGTACTGGTGTGGGAATGGGGGTGGACAAAAAGTGCTGAAACTTGGAATGGAAGAGCAGCTATGCTTGCTGTGCTTCT TCTGTTGTTTTTAGAAGTCACCACTGGTGAAGGATTTTTGCACCAGTGGGGAATATTGCCCTTGTTTAGGTGA
Download CDS Sequence

Protein sequence (LotjaGi4g1v0415800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MNSAIHAPSSPSSSSCSYIRPLPCITCASRNFKFPMLLPQATCTTQKMHRCSGGNMEASTNPSPLKNCIVGKYNPGWSET QPLFSKQSLNRHLLPVEALVTPTAQDVSDTPFLGDDKIGVLLLNLGGPETLDDVQPFLFNLFADPDIIRLPRLFGFLQKP LAQFVSVLRAPKSKEGYASIGGGSPLRRMTDAQAEELRKCLWEKNVPANVYVGMRYWHPFTEEAIEQIKRDGITKLVVLP LYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYIKAMVNLIEKELKGFDCPEKVMIFFSAHGVPLAYVE EAGDPYKAEMEECVDLIMEELERRKITNAYTLAYQSRVGPVEWLKPYTDDTIVELGKNGVKSLLAVPISFVSEHIETLEE IDVEYKELALESGIEKWGRVPALGCEPTFISDLADAVIESLPYVGAMAVSNLEARQSLVPLGSVEELLAAYDSQRRELPP PVLVWEWGWTKSAETWNGRAAMLAVLLLLFLEVTTGEGFLHQWGILPLFR
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius
NON_CYTOPLASMIC_DOMAIN
1 499 499 - –
PANTHER
PTHR11108
92 520 429 6.5E-211
IPR001015
Hamap
MF_00323
116 441 326 36.522
IPR001015
SUPERFAMILY
SSF53800
116 447 332 1.96E-107 –
TIGRFAM
TIGR00109
116 441 326 2.1E-112
IPR001015
Pfam
PF00762
117 440 324 5.1E-110
IPR001015
Gene3D
G3DSA:3.40.50.1400
117 441 325 2.2E-123 –
CDD
cd03411
118 280 163 3.7236E-69
IPR033659
Gene3D
G3DSA:3.40.50.1400
279 422 144 2.2E-123 –
CDD
cd00419
286 424 139 1.23618E-58
IPR033644
ProSitePatterns
PS00534
307 328 22 -
IPR019772
SUPERFAMILY
SSF103511
485 525 41 5.23E-12 –
Phobius
TRANSMEMBRANE
500 520 21 - –
Phobius
CYTOPLASMIC_DOMAIN
521 530 10 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004325
Molecular function Ferrochelatase activity Catalysis of the reaction: protoheme = Fe(2+) + protoporphyrin IX.
Subterm of
GO:0006783
Biological process Heme biosynthetic process The chemical reactions and pathways resulting in the formation of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, from less complex precursors.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0415800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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