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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0415800 |
| Transcript ID | LotjaGi4g1v0415800.4 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ferrochelatase; TAIR: AT2G30390.1 ferrochelatase 2; Swiss-Prot: sp|O04921|HEMH2_ARATH Ferrochelatase-2, chloroplastic; TrEMBL-Plants: tr|K7KRA8|K7KRA8_SOYBN Ferrochelatase; Found in the gene: LotjaGi4g1v0415800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:79134002..79138360) extracted from Lotus japonicus Gifu genome v1.2.
CATGTTAAATTGTGTTTTTTCTTGTATCATGACTATTTTATCACAAAATTTTAGTGGAGTTTTCCAGTGCTTTTAACATC CTTTATTTTCGAAGGCTGTTGCCGCAGGCAACATGTACCACTCAAAAGATGCATCGCTGCTCTGGAGGCAACATGGAAGC TTCTACTAACCCTAGTCCATTGAAAAATTGTATAGTTGGCAAATATAATCCAGGATGGTCTGAAACACAACCCTTGTTTT CCAAGCAATCACTCAACAGACACTTGTTGCCAGTGGAAGCTCTAGTCACTCCAACTGCTCAAGATGTATCTGATACACCT TTTCTTGGTGATGATAAGATTGGAGTGTTACTGTTAAACCTTGGAGGTCCAGAGACTCTAGACGATGTGCAGCCTTTTTT GTTCAATCTTTTTGCTGATCCAGTAATTCTCTAGCTTTAGCTAACTGTTATCCTTTTTATCACTAACTTGTTTAGGTTTA GATAACCTTAAACTTTCAATTTCTGATTCTTATTTATGTCCAGTTATATTTTATGTACATTCCTGCCAGTTTTCTGGTTT ATGAGGAAAACTTTGAATTTCTTATGCTTTGATTGTTACTTATGTTTTCCGTACAATTTTGCAGGATATTATTCGTTTGC CAAGGTTATTTGGTTTTCTTCAAAAGCCATTGGCCCAGTTTGTGTCTGTTTTAAGGGCACCAAAGAGCAAAGAAGGCTAT GCTTCAATTGGTGGTGGTTCCCCCCTTAGACGTATGACTGATGCTCAGGCATGGCACTTCCTGTCCTGCTAACAGATATT ATTGCATATATTTCACTTCCAACTGTTTGATAGTTCTTTAGAGACTTAAAATTTAAATTTATCAGATATTGAATTGGTTA TGTATGAGATAGAGAGGTCTTGAGCTCTTTATATATGTATCTAGTGTATATAATTGATATCTTGTATCCATTTTAAGTTT TAGGAATAAAATAAGCAAATTGGTTGATGGCAAAGAAGTTATGGATCTCTTTGAGAAAGTCAGTCTTTTGCATAACAAAT TTTCTGCACAATAGAAGTTAAGAAGTTAGAACTGTTTCATGTAGGCAGACATATTGTTTCAACAGGAAATTTAAAGTTAC CAGATTGTAGAATTTTTATAGTCTTCTCATGTAATTAATGTTTTTCCAACCATTTCAAGCCAAATTTTAAAATTTTCACT AGTTCATTGAGATTTTACGATCAGCATGTTATATTTTTTCTAATGTTTTTAAATGCTTTTTAATGCTACACAATATGCTT TGGGGTACATAACATGTCCACTCCATAAAATTATTCCTTTTGTTGTTTTAACTCTCTTATTGTTCTTGCTCCGTTGATGA TCTAACAGGCTGAAGAGTTGAGAAAATGTCTTTGGGAAAAAAATGTCCCAGCCAATGTGTATGTTGGAATGCGTTACTGG CATCCATTCACCGAAGAGGCTATTGAGCAGGTCTTGCATCATATTGTTCTTAGAATACAATGTGAAATTGGTTAGCATTT GATTAAGATGATGCCACTCGTAATGACATATTTTACAATTTTCAAGAGGATGTCATCTGATTTCTCTGATTAGTTGTATA TAAATGCATGGCAGCCTTTAGAACTGTTTTGAAAATATAAAATCTGTTTTAAAGGGTGGTTTGCAAGAAACAGTTGCTAT GTTACTTATCAAATATATGCAGTCTTACTGGTTATCTTATTGAAAAAACTTTTACCCTTGAACTAACTCGTGGGTGAACT AATTCTTTTGAAATTAGTTGATATAATTTTATATTCCATTTGTCTATCTGTGATTATTCATTTTTCCTTTGAAATATAAC ATGTAGATTAAAAGGGATGGAATCACAAAGCTTGTTGTGCTTCCACTTTATCCACAATTTTCAATTTCAACCAGCGGCTC AAGTCTGCGTCTCTTGGAGAGTATATTCCGGTGATTACTATAAAAATGAACTGTTATCACATCATTATGTTCCATTCTAT CATCTAACATTCGGTAATGTTATGAATTGTTTTTGGTTCTTTAGAGAGGATGAGTATCTAGTCAACATGCAGCACACGGT AATACCTTCATGGTACCAGCGTGAAGGATACATAAAGGCCATGGTAAATTTAATTGAAAAAGAGCTAAAGGGTTTTGACT GCCCTGAGAAGGTACCACTTCTTTTTGTGTAAATGACAGAGATGGTTCTTAAACATTTTTATCTTATCATTGTTACTCTT CTTCTCCAAATGTTAGGATAATGCAATGGTGATGGTAAGAGTAACTTACTCGACTAACTAATGAGCATTGCAATGGTAAC TTTAGTTTCAAAAAAAGAAATGGAAGGACTTACCTATATTGTGGGATTTAAATGCAAGTGAAGAATTATTTGGGGATCAA AATCACATATTAGCCATAGTGGAGGGGCTGAAAGTGCAATTAAAACTCATTTTCTCTTATTTTGGCATTGCTTATAAAGT TTTTCCTGAACTTTGAGTTCCCTTAAGATTGAGGTTGCAGGTCACGTTTCTGTAAATATATGTTCTTACTCCTAGTGACT GATGCACGTTGCAGGTCATGATATTCTTTAGTGCGCATGGGGTGCCACTTGCTTATGTAGAAGAGGCTGGTGATCCATAC AAGGCAGAGATGGAGGAATGCGTAGATTTGATCATGGAAGAGCTTGAGAGAAGAAAGATAACTAATGCATACACCCTTGC TTATCAGGTAGTCTTTTTTTATAATAAAATTGCTCATCCTCGCTCTCTAGTTTAAAAGTATTAATACATGATATTGATTT ATAAAAAAGGCACCAAGTACTGAGGTGTGTATGGTACAATCAGAGAGTTCTCTTTGAAAAATATGGATCCGAGTTTGAAG AAGGGGAAAGAGTCCTTGACCCGGAAAAGATATAGGAGGATTTATCCAATCACATAGTTTGGGCTCCTAGAATATGGTGC CCATAGGGCTTTCTATTTGATTTTATCGAAAGGCCCATTGAATTGGGATTTCCCTATTGGGCCAGGTCATTTCAGGGCAA GCGGATCATTTATGATAAAGAGTATGAGCTTCAAGAGAATGATTCGGAGTTCTTGCAGGGTGGAACCATGCAGTACAACA TATATCAAGAGGGCAACTCTATCTTTCGAAAAGTGAACATTTTTGTCAAGAATGGGAATTTTCCAGCATAAGAAAGTCAA TGTCTAGACTCTGGAGTGAGACTTCTTTTCAGCTTATGTATAAAGTACAGCCAGTATAGTCCTCACCAAAGTTACCATTG GGGTTTCTCTATCAACTAGGCAATAATATTCCTAACAGTTTGTGTGATTCACCTGTTATTGCATAAAGAAACCTCTTTGC AATAAAACGCTCCTCTTTGATAGGGATCTCAGGGAACCCCGCGGAGAACTGATCCCTATGCAATTAATCTGTACCAATCT CTTCCTACTTCCAAACCTGACTACTGCTTTTAGATACATCCTTTTACAAATTTTCTAACAATTGACCATGATTCTTGTTA CAGAGTAGAGTTGGACCTGTGGAATGGTTAAAACCCTACACCGATGACACAATAGTTGAACTTGGGAAAAACGGAGTAAA AAGTCTGCTGGCTGTGCCAATTAGGTAACACCAGCCTTCCTTGTTAATGATTTTAGTTCACTTCTATCTGTTCAGTGGCT GCCTTCTTTCTCCCTATCTGTCTCAAACCAACACAGTGAACAAGTGAGACGAGCATTTTTTCCTATTCTCTTCACAGCTT TGTCAGCGAACATATTGAAACTCTTGAAGAAATTGATGTTGAATACAAAGAGTTGGCTCTAGAATCCGGTATAGAAAAAT GGGGTCGTGTTCCTGCACTGGGATGTGAACCCACATTCATTTCAGATTTAGCAGATGCTGTAATTGAGAGCCTTCCATAT GTTGGTGCAATGGCAGTTTCAAACCTTGAAGCTCGACAGGTATTCTTCTCAACTCATATGTATATTTTTCTATTCTAGAA GTACACACTTTCCAAGTCAGGGAACTGTTGATATCAAATTATAAATTGAGTCATATTAGTTTATATAGATACTGTATTCT GTAGTTTCATACTTTCTTTGTGTGATCTAACAGAAAGTTTTGGCTCTTTGGCAGTCTTTGGTTCCCCTTGGAAGTGTAGA AGAATTATTGGCGGCATATGACTCGCAGCGTAGGGAGTTGCCGCCACCAGTACTGGTGTGGGAATGGGGGTGGACAAAAA GTGCTGAAACTTGGAATGGAAGAGCAGCTATGCTTGCTGTGCTTCTTCTGTTGTTTTTAGAAGTCACCACTGGTGAAGGA TTTTTGCACCAGTGGGGAATATTGCCCTTGTTTAGGTGA
CDS sequence (LotjaGi4g1v0415800.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCATCGCTGCTCTGGAGGCAACATGGAAGCTTCTACTAACCCTAGTCCATTGAAAAATTGTATAGTTGGCAAATATAA TCCAGGATGGTCTGAAACACAACCCTTGTTTTCCAAGCAATCACTCAACAGACACTTGTTGCCAGTGGAAGCTCTAGTCA CTCCAACTGCTCAAGATGTATCTGATACACCTTTTCTTGGTGATGATAAGATTGGAGTGTTACTGTTAAACCTTGGAGGT CCAGAGACTCTAGACGATGTGCAGCCTTTTTTGTTCAATCTTTTTGCTGATCCAGATATTATTCGTTTGCCAAGGTTATT TGGTTTTCTTCAAAAGCCATTGGCCCAGTTTGTGTCTGTTTTAAGGGCACCAAAGAGCAAAGAAGGCTATGCTTCAATTG GTGGTGGTTCCCCCCTTAGACGTATGACTGATGCTCAGGCTGAAGAGTTGAGAAAATGTCTTTGGGAAAAAAATGTCCCA GCCAATGTGTATGTTGGAATGCGTTACTGGCATCCATTCACCGAAGAGGCTATTGAGCAGGTCATGATATTCTTTAGTGC GCATGGGGTGCCACTTGCTTATGTAGAAGAGGCTGGTGATCCATACAAGGCAGAGATGGAGGAATGCGTAGATTTGATCA TGGAAGAGCTTGAGAGAAGAAAGATAACTAATGCATACACCCTTGCTTATCAGAGTAGAGTTGGACCTGTGGAATGGTTA AAACCCTACACCGATGACACAATAGTTGAACTTGGGAAAAACGGAGTAAAAAGTCTGCTGGCTGTGCCAATTAGCTTTGT CAGCGAACATATTGAAACTCTTGAAGAAATTGATGTTGAATACAAAGAGTTGGCTCTAGAATCCGGTATAGAAAAATGGG GTCGTGTTCCTGCACTGGGATGTGAACCCACATTCATTTCAGATTTAGCAGATGCTGTAATTGAGAGCCTTCCATATGTT GGTGCAATGGCAGTTTCAAACCTTGAAGCTCGACAGTCTTTGGTTCCCCTTGGAAGTGTAGAAGAATTATTGGCGGCATA TGACTCGCAGCGTAGGGAGTTGCCGCCACCAGTACTGGTGTGGGAATGGGGGTGGACAAAAAGTGCTGAAACTTGGAATG GAAGAGCAGCTATGCTTGCTGTGCTTCTTCTGTTGTTTTTAGAAGTCACCACTGGTGAAGGATTTTTGCACCAGTGGGGA ATATTGCCCTTGTTTAGGTGA
Protein sequence (LotjaGi4g1v0415800.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MHRCSGGNMEASTNPSPLKNCIVGKYNPGWSETQPLFSKQSLNRHLLPVEALVTPTAQDVSDTPFLGDDKIGVLLLNLGG PETLDDVQPFLFNLFADPDIIRLPRLFGFLQKPLAQFVSVLRAPKSKEGYASIGGGSPLRRMTDAQAEELRKCLWEKNVP ANVYVGMRYWHPFTEEAIEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELERRKITNAYTLAYQSRVGPVEWL KPYTDDTIVELGKNGVKSLLAVPISFVSEHIETLEEIDVEYKELALESGIEKWGRVPALGCEPTFISDLADAVIESLPYV GAMAVSNLEARQSLVPLGSVEELLAAYDSQRRELPPPVLVWEWGWTKSAETWNGRAAMLAVLLLLFLEVTTGEGFLHQWG ILPLFR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 375 | 375 | - | – | |
| PANTHER | 50 | 180 | 131 | 7.0E-159 | ||
| Gene3D | 67 | 180 | 114 | 7.8E-45 | – | |
| SUPERFAMILY | 69 | 323 | 255 | 1.39E-78 | – | |
| Hamap | 69 | 317 | 249 | 23.825 | ||
| CDD | 71 | 181 | 111 | 5.39542E-48 | ||
| CDD | 179 | 300 | 122 | 3.51376E-55 | ||
| TIGRFAM | 179 | 317 | 139 | 1.6E-45 | ||
| PANTHER | 179 | 396 | 218 | 7.0E-159 | ||
| Pfam | 181 | 316 | 136 | 2.7E-47 | ||
| Gene3D | 181 | 298 | 118 | 7.6E-52 | – | |
| ProSitePatterns | 183 | 204 | 22 | - | ||
| Gene3D | 299 | 317 | 19 | 7.6E-52 | – | |
| SUPERFAMILY | 361 | 401 | 41 | 3.53E-12 | – | |
| Phobius | 376 | 396 | 21 | - | – | |
| Phobius | 397 | 406 | 10 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Ferrochelatase activity | Catalysis of the reaction: protoheme = Fe(2+) + protoporphyrin IX. | ||
| Biological process | Heme biosynthetic process | The chemical reactions and pathways resulting in the formation of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, from less complex precursors. |
Expression pattern of LotjaGi4g1v0415800.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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