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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0415800 |
| Transcript ID | LotjaGi4g1v0415800.5 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ferrochelatase; TAIR: AT2G30390.1 ferrochelatase 2; Swiss-Prot: sp|Q0DIV0|HEMH2_ORYSJ Ferrochelatase-2, chloroplastic; TrEMBL-Plants: tr|G7LGG4|G7LGG4_MEDTR Ferrochelatase; Found in the gene: LotjaGi4g1v0415800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:79134002..79138360) extracted from Lotus japonicus Gifu genome v1.2.
CATGTTAAATTGTGTTTTTTCTTGTATCATGACTATTTTATCACAAAATTTTAGTGGAGTTTTCCAGTGCTTTTAACATC CTTTATTTTCGAAGGCTGTTGCCGCAGGCAACATGTACCACTCAAAAGATGCATCGCTGCTCTGGAGGCAACATGGAAGC TTCTACTAACCCTAGTCCATTGAAAAATTGTATAGTTGGCAAATATAATCCAGGATGGTCTGAAACACAACCCTTGTTTT CCAAGCAATCACTCAACAGACACTTGTTGCCAGTGGAAGCTCTAGTCACTCCAACTGCTCAAGATGTATCTGATACACCT TTTCTTGGTGATGATAAGATTGGAGTGTTACTGTTAAACCTTGGAGGTCCAGAGACTCTAGACGATGTGCAGCCTTTTTT GTTCAATCTTTTTGCTGATCCAGTAATTCTCTAGCTTTAGCTAACTGTTATCCTTTTTATCACTAACTTGTTTAGGTTTA GATAACCTTAAACTTTCAATTTCTGATTCTTATTTATGTCCAGTTATATTTTATGTACATTCCTGCCAGTTTTCTGGTTT ATGAGGAAAACTTTGAATTTCTTATGCTTTGATTGTTACTTATGTTTTCCGTACAATTTTGCAGGATATTATTCGTTTGC CAAGGTTATTTGGTTTTCTTCAAAAGCCATTGGCCCAGTTTGTGTCTGTTTTAAGGGCACCAAAGAGCAAAGAAGGCTAT GCTTCAATTGGTGGTGGTTCCCCCCTTAGACGTATGACTGATGCTCAGGCATGGCACTTCCTGTCCTGCTAACAGATATT ATTGCATATATTTCACTTCCAACTGTTTGATAGTTCTTTAGAGACTTAAAATTTAAATTTATCAGATATTGAATTGGTTA TGTATGAGATAGAGAGGTCTTGAGCTCTTTATATATGTATCTAGTGTATATAATTGATATCTTGTATCCATTTTAAGTTT TAGGAATAAAATAAGCAAATTGGTTGATGGCAAAGAAGTTATGGATCTCTTTGAGAAAGTCAGTCTTTTGCATAACAAAT TTTCTGCACAATAGAAGTTAAGAAGTTAGAACTGTTTCATGTAGGCAGACATATTGTTTCAACAGGAAATTTAAAGTTAC CAGATTGTAGAATTTTTATAGTCTTCTCATGTAATTAATGTTTTTCCAACCATTTCAAGCCAAATTTTAAAATTTTCACT AGTTCATTGAGATTTTACGATCAGCATGTTATATTTTTTCTAATGTTTTTAAATGCTTTTTAATGCTACACAATATGCTT TGGGGTACATAACATGTCCACTCCATAAAATTATTCCTTTTGTTGTTTTAACTCTCTTATTGTTCTTGCTCCGTTGATGA TCTAACAGGCTGAAGAGTTGAGAAAATGTCTTTGGGAAAAAAATGTCCCAGCCAATGTGTATGTTGGAATGCGTTACTGG CATCCATTCACCGAAGAGGCTATTGAGCAGGTCTTGCATCATATTGTTCTTAGAATACAATGTGAAATTGGTTAGCATTT GATTAAGATGATGCCACTCGTAATGACATATTTTACAATTTTCAAGAGGATGTCATCTGATTTCTCTGATTAGTTGTATA TAAATGCATGGCAGCCTTTAGAACTGTTTTGAAAATATAAAATCTGTTTTAAAGGGTGGTTTGCAAGAAACAGTTGCTAT GTTACTTATCAAATATATGCAGTCTTACTGGTTATCTTATTGAAAAAACTTTTACCCTTGAACTAACTCGTGGGTGAACT AATTCTTTTGAAATTAGTTGATATAATTTTATATTCCATTTGTCTATCTGTGATTATTCATTTTTCCTTTGAAATATAAC ATGTAGATTAAAAGGGATGGAATCACAAAGCTTGTTGTGCTTCCACTTTATCCACAATTTTCAATTTCAACCAGCGGCTC AAGTCTGCGTCTCTTGGAGAGTATATTCCGGTGATTACTATAAAAATGAACTGTTATCACATCATTATGTTCCATTCTAT CATCTAACATTCGGTAATGTTATGAATTGTTTTTGGTTCTTTAGAGAGGATGAGTATCTAGTCAACATGCAGCACACGGT AATACCTTCATGGTACCAGCGTGAAGGATACATAAAGGCCATGGTAAATTTAATTGAAAAAGAGCTAAAGGGTTTTGACT GCCCTGAGAAGGTACCACTTCTTTTTGTGTAAATGACAGAGATGGTTCTTAAACATTTTTATCTTATCATTGTTACTCTT CTTCTCCAAATGTTAGGATAATGCAATGGTGATGGTAAGAGTAACTTACTCGACTAACTAATGAGCATTGCAATGGTAAC TTTAGTTTCAAAAAAAGAAATGGAAGGACTTACCTATATTGTGGGATTTAAATGCAAGTGAAGAATTATTTGGGGATCAA AATCACATATTAGCCATAGTGGAGGGGCTGAAAGTGCAATTAAAACTCATTTTCTCTTATTTTGGCATTGCTTATAAAGT TTTTCCTGAACTTTGAGTTCCCTTAAGATTGAGGTTGCAGGTCACGTTTCTGTAAATATATGTTCTTACTCCTAGTGACT GATGCACGTTGCAGGTCATGATATTCTTTAGTGCGCATGGGGTGCCACTTGCTTATGTAGAAGAGGCTGGTGATCCATAC AAGGCAGAGATGGAGGAATGCGTAGATTTGATCATGGAAGAGCTTGAGAGAAGAAAGATAACTAATGCATACACCCTTGC TTATCAGGTAGTCTTTTTTTATAATAAAATTGCTCATCCTCGCTCTCTAGTTTAAAAGTATTAATACATGATATTGATTT ATAAAAAAGGCACCAAGTACTGAGGTGTGTATGGTACAATCAGAGAGTTCTCTTTGAAAAATATGGATCCGAGTTTGAAG AAGGGGAAAGAGTCCTTGACCCGGAAAAGATATAGGAGGATTTATCCAATCACATAGTTTGGGCTCCTAGAATATGGTGC CCATAGGGCTTTCTATTTGATTTTATCGAAAGGCCCATTGAATTGGGATTTCCCTATTGGGCCAGGTCATTTCAGGGCAA GCGGATCATTTATGATAAAGAGTATGAGCTTCAAGAGAATGATTCGGAGTTCTTGCAGGGTGGAACCATGCAGTACAACA TATATCAAGAGGGCAACTCTATCTTTCGAAAAGTGAACATTTTTGTCAAGAATGGGAATTTTCCAGCATAAGAAAGTCAA TGTCTAGACTCTGGAGTGAGACTTCTTTTCAGCTTATGTATAAAGTACAGCCAGTATAGTCCTCACCAAAGTTACCATTG GGGTTTCTCTATCAACTAGGCAATAATATTCCTAACAGTTTGTGTGATTCACCTGTTATTGCATAAAGAAACCTCTTTGC AATAAAACGCTCCTCTTTGATAGGGATCTCAGGGAACCCCGCGGAGAACTGATCCCTATGCAATTAATCTGTACCAATCT CTTCCTACTTCCAAACCTGACTACTGCTTTTAGATACATCCTTTTACAAATTTTCTAACAATTGACCATGATTCTTGTTA CAGAGTAGAGTTGGACCTGTGGAATGGTTAAAACCCTACACCGATGACACAATAGTTGAACTTGGGAAAAACGGAGTAAA AAGTCTGCTGGCTGTGCCAATTAGGTAACACCAGCCTTCCTTGTTAATGATTTTAGTTCACTTCTATCTGTTCAGTGGCT GCCTTCTTTCTCCCTATCTGTCTCAAACCAACACAGTGAACAAGTGAGACGAGCATTTTTTCCTATTCTCTTCACAGCTT TGTCAGCGAACATATTGAAACTCTTGAAGAAATTGATGTTGAATACAAAGAGTTGGCTCTAGAATCCGGTATAGAAAAAT GGGGTCGTGTTCCTGCACTGGGATGTGAACCCACATTCATTTCAGATTTAGCAGATGCTGTAATTGAGAGCCTTCCATAT GTTGGTGCAATGGCAGTTTCAAACCTTGAAGCTCGACAGGTATTCTTCTCAACTCATATGTATATTTTTCTATTCTAGAA GTACACACTTTCCAAGTCAGGGAACTGTTGATATCAAATTATAAATTGAGTCATATTAGTTTATATAGATACTGTATTCT GTAGTTTCATACTTTCTTTGTGTGATCTAACAGAAAGTTTTGGCTCTTTGGCAGTCTTTGGTTCCCCTTGGAAGTGTAGA AGAATTATTGGCGGCATATGACTCGCAGCGTAGGGAGTTGCCGCCACCAGTACTGGTGTGGGAATGGGGGTGGACAAAAA GTGCTGAAACTTGGAATGGAAGAGCAGCTATGCTTGCTGTGCTTCTTCTGTTGTTTTTAGAAGTCACCACTGGTGAAGGA TTTTTGCACCAGTGGGGAATATTGCCCTTGTTTAGGTGA
CDS sequence (LotjaGi4g1v0415800.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCATCGCTGCTCTGGAGGCAACATGGAAGCTTCTACTAACCCTAGTCCATTGAAAAATTGTATAGTTGGCAAATATAA TCCAGGATGGTCTGAAACACAACCCTTGTTTTCCAAGCAATCACTCAACAGACACTTGTTGCCAGTGGAAGCTCTAGTCA CTCCAACTGCTCAAGATGTATCTGATACACCTTTTCTTGGTGATGATAAGATTGGAGTGTTACTGTTAAACCTTGGAGGT CCAGAGACTCTAGACGATGTGCAGCCTTTTTTGTTCAATCTTTTTGCTGATCCAGATATTATTCGTTTGCCAAGGTTATT TGGTTTTCTTCAAAAGCCATTGGCCCAGTTTGTGTCTGTTTTAAGGGCACCAAAGAGCAAAGAAGGCTATGCTTCAATTG GTGGTGGTTCCCCCCTTAGACGTATGACTGATGCTCAGGCTGAAGAGTTGAGAAAATGTCTTTGGGAAAAAAATGTCCCA GCCAATGTGTATGTTGGAATGCGTTACTGGCATCCATTCACCGAAGAGGCTATTGAGCAGATTAAAAGGGATGGAATCAC AAAGCTTGTTGTGCTTCCACTTTATCCACAATTTTCAATTTCAACCAGCGGCTCAAGTCTGCGTCTCTTGGAGAGTATAT TCCGAGAGGATGAGTATCTAGTCAACATGCAGCACACGGTAATACCTTCATGGTACCAGCGTGAAGGATACATAAAGGCC ATGGTAAATTTAATTGAAAAAGAGCTAAAGGGTTTTGACTGCCCTGAGAAGGTCATGATATTCTTTAGTGCGCATGGGGT GCCACTTGCTTATGTAGAAGAGGCTGGTGATCCATACAAGGCAGAGATGGAGGAATGCGTAGATTTGATCATGGAAGAGC TTGAGAGAAGAAAGATAACTAATGCATACACCCTTGCTTATCAGAGTAGAGTTGGACCTGTGGAATGGTTAAAACCCTAC ACCGATGACACAATAGTTGAACTTGGGAAAAACGGAGTAAAAAGTCTGCTGGCTGTGCCAATTAGCTTTGTCAGCGAACA TATTGAAACTCTTGAAGAAATTGATGTTGAATACAAAGAGTTGGCTCTAGAATCCGGTATAGAAAAATGGGGTCGTGTTC CTGCACTGGGATGTGAACCCACATTCATTTCAGATTTAGCAGATGCTGTAATTGAGAGCCTTCCATATGTTGGTGCAATG GCAGTTTCAAACCTTGAAGCTCGACAGTCTTTGGTTCCCCTTGGAAGTGTAGAAGAATTATTGGCGGCATATGACTCGCA GCGTAGGGAGTTGCCGCCACCAGTACTGGTGTGGGAATGGGGGTGGACAAAAAGTGCTGAAACTTGGAATGGAAGAGCAG CTATGCTTGCTGTGCTTCTTCTGTTGTTTTTAGAAGTCACCACTGGTGAAGGATTTTTGCACCAGTGGGGAATATTGCCC TTGTTTAGGTGA
Protein sequence (LotjaGi4g1v0415800.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MHRCSGGNMEASTNPSPLKNCIVGKYNPGWSETQPLFSKQSLNRHLLPVEALVTPTAQDVSDTPFLGDDKIGVLLLNLGG PETLDDVQPFLFNLFADPDIIRLPRLFGFLQKPLAQFVSVLRAPKSKEGYASIGGGSPLRRMTDAQAEELRKCLWEKNVP ANVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYIKA MVNLIEKELKGFDCPEKVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELERRKITNAYTLAYQSRVGPVEWLKPY TDDTIVELGKNGVKSLLAVPISFVSEHIETLEEIDVEYKELALESGIEKWGRVPALGCEPTFISDLADAVIESLPYVGAM AVSNLEARQSLVPLGSVEELLAAYDSQRRELPPPVLVWEWGWTKSAETWNGRAAMLAVLLLLFLEVTTGEGFLHQWGILP LFR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 452 | 452 | - | – | |
| PANTHER | 52 | 473 | 422 | 5.3E-211 | ||
| TIGRFAM | 69 | 394 | 326 | 1.6E-112 | ||
| Hamap | 69 | 394 | 326 | 36.522 | ||
| SUPERFAMILY | 69 | 400 | 332 | 1.44E-107 | – | |
| Pfam | 70 | 393 | 324 | 3.9E-110 | ||
| Gene3D | 70 | 394 | 325 | 1.7E-123 | – | |
| CDD | 71 | 233 | 163 | 1.61307E-69 | ||
| Gene3D | 232 | 375 | 144 | 1.7E-123 | – | |
| CDD | 239 | 377 | 139 | 9.10105E-59 | ||
| ProSitePatterns | 260 | 281 | 22 | - | ||
| SUPERFAMILY | 438 | 478 | 41 | 4.58E-12 | – | |
| Phobius | 453 | 473 | 21 | - | – | |
| Phobius | 474 | 483 | 10 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Ferrochelatase activity | Catalysis of the reaction: protoheme = Fe(2+) + protoporphyrin IX. | ||
| Biological process | Heme biosynthetic process | The chemical reactions and pathways resulting in the formation of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, from less complex precursors. |
Expression pattern of LotjaGi4g1v0415800.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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