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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0416500 |
| Transcript ID | LotjaGi4g1v0416500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Tyrosyl-DNA phosphodiesterase 1; TAIR: AT5G07400.1 forkhead-associated domain-containing protein / FHA domain-containing protein; Swiss-Prot: sp|Q9NUW8|TYDP1_HUMAN Tyrosyl-DNA phosphodiesterase 1; TrEMBL-Plants: tr|G7LGI2|G7LGI2_MEDTR Tyrosyl-DNA phosphodiesterase; Found in the gene: LotjaGi4g1v0416500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:79212458..79219717) extracted from Lotus japonicus Gifu genome v1.2.
GTGGATTTTGACGCCGTTAAAAGTAACCTAATCCTCAAAATCATAAACTTTGGAGGGAAAAAAATTGAGAGGGAAAATCA ACTGATTCTCTTCTTCAATCTTCTCACACACACTTCCTCTCTATTTTTTTCCACCCCTTCAAAATTTTCCTCCCATTTTC CCTCTTCCATTCCACCACCATGATCGATTCCGATTCCGATTCCGATTCCGATTCCACTCCCAACAAGAAGCAGAGAACCA CCGTCGTATTGAACCATTTCGATGTCCCTCTGATTTCCTCCGCCTCCAACGGCGTCGTTTCGCCCTGCGACTCCATGCGC CTCCACGCGGACTACCCGTACTCGATCGGCCGAAAACCTCGCGACTGCGACTTCGTCTTCCATGACCGCCGCGTCAGCAA GCGCCATTGCCAGATCTTCTTCGACGGTTCCCTCCGCAAGCTCTACCTTCTGAGCGGAGTTCTGTCAAATAGCGATTGCT CTACCATCACCACCAACGCTCATCTTGTTCACGAGTTCCGGAAAAGGGTAGTGATGGGGTCTCGCGGCAGTGACCGTATT CCGTTTCGAGAAGCTTCCAACGGGGTTTTCGTGAACGGAGTCGAGATCGGGAAGGGAATGGCGGTGGAGTTATCGGCTGG AGATAGGGTTTCGTTGGTTTGTGGAAACCAGAGCGGTTCTTGTGATGTTGGGAATCGGATAGGATTTGTTGTTCAGAGGA TTGTCCTTGAAGGGTGTGAATGGGATCGTGATGGTGGTGGTGATAGTGTTGAAATTGATGGGTTAACGTTCTCGGGCCAT TCGCAAAGTGGGAAGCGAAGCAAGAGGGTTTTTGCTGTGAAGGTTGGTGTTTCGAGATGTGAGGGTGTTGTTGGGAGAGC AAGGTTTCTTCTAGATAAGTGTAGAGACATATTGCTCAGTGATGATCCTTTGTCTTGCATTTCGCGTGCGGTTTCGGATT TACCATCAAGGGTGGTGGAAAACACAAGTACTAGTGGAGGTGGTGTTGGACTGTCAAGTTCAGCTATGCTTTGTGAGAGT AAAGTGATGGATTTGGAGGCAAAAAGTGAGCATTTTGGTGGAAGAGGGAATGCGGGGGTTGCTTGTGTGAGTGCTATGGA TGATAACAATCATGATGCGGCGCTGCGAGATTCTGTAGCGAAGGATAGTCTTCCTTCTTGTGGCGCGTTTCATCCACCGC CCGGGAAGAATTTTTACCTGAATCGCCTTGAGTTGATGGACCATGGGTCCTCCTCGGGTCTTCATCATTCCATATCTCTC CCTGAGCTTATTTATCCTGTTGAAAGCATTTCAAGGATGTTCATTGCAACATTTACAAGTGACATAAAATGGTGTGGTTA CCTAAAGTTTCCCAATGTATTGTTTTCCTCTCATGATATTATTTTTTCAAACCATTTTTGCATCTTGGCTTGTGATTTTT TTTTTCATGCGCCTCCTTACTCGTGTTTATATGTTTGAGATGTGCATTTTCATTCCACTTATGTATATCTCAGTATGTGT GAACTGCTATACTTGAATTTGTTTAAACTTTACAATCCTGACTGTGGTGTCTTGTTAGGTTCTTGACATATTGTAAGATC CCTTTTCATCTGCCAGTTACGATTGCTTGTCACAATACTGAGAGATGTTGGAGTTCAAGGCCAGATGAAAGAGAATTTGT GCCTTATCAGGATTATCCTAACCTAGTTGTAGTGTAAGCTTCTTCTTCTTCTTCAATGTTGGGGGTGATGGGGGGCTTGG AGGATATGTAACTTAATTGATGGTGTCTTACTATGTTGCATTTTATTTCTCCTCTTTGGGAATGTACTTTCTCATTGCAT ATCAGGTGTCCTCCATTCCCGGAAACCATAGCATTTGGCAATAACCGCAAAAAACAGGGGATTGCTTGCCATCATCCAAA GTTGATTGTTGTGCAAAGAGAAGATAGTATTCGAGTTGTCATTACATCTGCAAATTTGGTGGAAAAGCAGGTATCTACTT ACAAAACTTCTAGCTATTAACATTAATACATAATTTTTAACTTTCAAATTCAAGAGCAAAATGTTGTACTAAAAATGTTT TGATGAAAGACATAAGTACAATGGCCATGATGCCCCCACTGTTTTTTCTTTGCTGGTCATCATGTAAAAGTTATGTGTAT TAGTTATTAAATTTAAACCTTTTATCATGCAGATAGTCGGTTCATAACTATGTTTTGTTTTTATGTCATTAACATAGCCA AACTATTGAATAAGTTTTTGTGGTTATGTAGTGGAACTATGTGACTAACACTATATGGTGGCAAGATTTCCCTCGCGGCA ATTCTGTTGACTTTGCGTCACTTTTCCCAAAAATTGATGATGGTGAAATCCATAGTGACTCAAAATGTGATTTTGCTGCT CAGTTGGCTGGGTTTATGGCATCTCTTGTTATTGATGTACCTAGCCAGGCTCAGTGGATTACTCAGTTGACAAAATATGA CTTTGAAGGTGCAACAGGACATCTTGTTGCTTCAGTACCTGGAATTCACTTTTACAGAACTTCTGTTCTGTTGGAATCAT TTCAGACATCTCCTGTAAGTACTCAAGTATCTCATGCAAAGATATTGTACTTAATTGAGAGTTGAGACACTGGTTGACTG CAGTTGCTACTTGCTACTGCCTTTGCAGTGTTATTTTTGGATATAAACTTTTGTCTTTTTAGTGCTTTTTAGTAAGTGAA AATGCACAGATGTCGTCTATATTTGGATTGGAATATTATACCCTGAAACCCTCCTGGTTGTAGCTAAAGTGGTGCTAGTT GAACTGTTGAGTTTTCATGTTAATTCCAGCATTAGTGTGAGCCATGTGTTCCTTTGGCGGCTTTAGATAACACCACTTTC TGCTATGTATTATTTGATTGCAATGTATAATCAGATACTGATTGCTGTGCGTTTTGGTCATCTGGTTTGAAGTTTCTTGG TTCAGTTGTGGCATCTGTGGTGGGTTTGAGCCATCTTTTCCGTACTGTAGCGGACTCAAACAGTGCAAGACTAAAAACAC TGGCTGTTTTTCTTAGAAAGTCTTGTAGGAAGGCTAATGGGTGGTTGGAGATTGTTTTAAGGAGAAATTCCAGTGTGCCT GCTGATAAAAATGCTGTTAGCGTTCTTATTCCGAACCCTGATGAAACTTCTGAGGGAGGTAAAAGCTACATTGCTTGGGA ATTCTTTTTGATCCATGTGTTTTGGATTCCCCATTCATCTTATGATTTTCAAATTTAATTTTTATTTCTGTTTCCTTTAT CATGTGTTCTGGACTTACAGAGTTACAGTTAAATTTTTCATGCTATCAATAACAGTAATAATATTGTTTTTTTTGTTCCT TTCTATAGACTATGTTCAACTTGGTTTTCTGCCTAGAGATGTGGCGAAATGGATTTCTCCTCTTTGGGATGCTGGATTCT TCATATTTTCTGGATGTGTTTGTCCAGTAGAGGCCCTCGCAGCTGCCTTAGGAGAGAACTCCAAGAAAGTTCAACTGATA CTAAATGTGTCAGAGGTGTGTTGTATGTGTCTTATATAGGATGACTTGTATATCGTCTTGTATATGTAACCTGAGATTCC TATAACTTTACGTCTTGTGTACATGCAGGGGCCTCATTTTCAAGATATGCCAAAGATGATGCAATCTGAACAAATTGTCG CATTTTGCTCGCTCATTGCTTCTATTCAAAGATGTTATGGCCTCTGGAGATTACAAGAGGTAAATGGCACACTTTATTGT CAGAATTAATATTATATTTGATTTCTTTTTGTAGTTTTGTTGCCTTTAAGGATTTATAAATTTTGTTTTCTTTGCCACTC TAGCACTCCTAATCTTCTTGCACATGGATGAAGTTTATGCTGAATTTTTTGAAAGATCCAGTTGTGTATAATTATTATCA CTTTTTGTATTAGGTTCTGAATCGATATAGATGGCCTGAATCATTAGAGTCTGAAATTATTTATGGTAAGTCCATTTTTT AAACATTATGTAGTATAAGGACGGTGATATTTCATTGTAAGTTAAAATCATCAAGCTGACCTCGTTCATTTTTCATCCTT TTGGACTATCATTTGATACCTTTTCATTCTATCAGGTGCATCTTCTATTGGTTCATCTGTCAATTCAAAATTTCTCGCAG CATTTTCGGCTGCTGCTGGGAAGAAATCATTGCAACATTTTGATTCAGAAGAGTCTGATCCAGAAGTAATTTGAAGGCCT TTGCTCTTCCATTAGATTTGCTTGCAAAGTTTTACATCTTTTCTGCAAGATGGATGAATAGTTGAAATTGTATTTTCCAT TAATTCTGTAACTTAATGATGCTTTGACAGTGGGGCTGCTGGAATGCAAACGAAGAATTGAAGAATCCTTCTGTGTGGAT TATTTTCCCCACTATTGAAAGAGTTAAGAATGCTTATAATGGGATTTTGCCGTCAAGACGCATGCTCTGCTTCGCAGAGG TAATATAACTTTTTGATCAGCTTTGAATGGATGAAGTTATAGCTAAGTATTTTTCTTTAAGGTAGATTTCTTTCATCCTT TGGCGCCCTTTCTTTTTATGATGGTATTGGTTCCCTCGGTAATTAGTGGTCAATATTTTGTCAGGTGTGCCATTGATTGA ACTACAGATACAAAAATAACTTGCTGAATTTATATTTCAAATAAGAAGAACAGATGGACAATATTGACCATTAATTGTTC AGGGGCATCACTACCAAAGAAACCTGTTCCTTAAAAACATTCTGAATAATTAAGGACATTTAAGTCCTCTTGTGAGTTTT TTATGTTGCAGGATCATGTGAGACACACACAAAGATATTGCATAGGTCATAATTTGTGGGACTCAATTTATGATCTGTGC CCATCTCTCTTAAAAACTCATTTTCAAAGGGATACTTGAAAGGAATATATTAAACCTCCCACACACCTAAAAAATATTGT TGAAGTTTGTATTGTTTTATTTTTTTTTTACTTTTTTAAAATATTCTTAAGATGAAGATTTGACACTGTATAGATGTTAT TATGTGAACATGCAGACTGATTCTCTACTTTTGAACAGAGAACATGGCAAAGGTTGAAGACTTTTGATGTACTCCGTGAT GCCATCCCTCATCCCTGCGAAAGAATAGGGCATCCAATGCATACTAAGGTAACTTAATACTAGTTATACTCCTGCACTGC ACTGAGTTACTCTTTAGTCCATGCTCTATATGCTGTTCTACAGGATTTGGCTTGGAAATTTGATTCCTCTAAAGTGGGCT CTTACTTAGAGGGGCAGTAAGAACTCTTGACCATTAATGAGATTGTATGAATTTGTTTGTCATTTGCTCCCTTGATTTTC TCATTAATGGTTGAGATGTCCCACTTTTCTTTCTGAAGTGAACTCCTTACTCTAGAGGAATCAAGTTTTGGTTTGGGTGA TTAGCTTCTCAATTATTGGACCTATCTATTATTTCCCCCCTACACCACAAAAGCATGTTTTAAGTCCTTTTATGTTAAAT GTTTTGCTCAGGTGATACGTAGATGCTTCTGGTCTAAGGGGGATGCACCTTCCATTGGTTGGGTATACTGTGGCTCTCAT AATTTTAGCGCTGCTGCCTGGGGGCGACAAATTTCAAATCCATTTGGTACAAAAGCCAGTGAACCTAAAAAGGTGGACCC TTCAGTGAATTCCGGCCTTCACATTTGCAATTATGAACTTGGGATTATATTTACCTTTCCTCCAATAGAAAATAACTATT GTTCTGAAGTTCAAAGAACCAAACTAGATGATATAATTCTTCCGTTTGTTGTGCCTGCACCTAAATATGGTTTTAGAGAT AGGCCAGCTACTATGCAAGCTATGAGGGAGGCTATGGCTGAACTTAATAAACTAGAGGAGAAAAATGCTGAAGAAGAATT GATGGAAGAAGACCTTCTTGAGGAAGAGGAAGAAATGGAAGCAACCAATAATGTTGGAGAGGAGATGGAAGAGGAAAAGG CATATGCTGAGATACTCTGGAGTCAGGTTGATTCTTCCCAGAGCAGTTGAACTGATGCAAGAAGCAATGCTGGGAGAAAC AAGCAGTGAATGAAGATATCAACAGGAGTATTTGATGCACAATTCTCAAGGTAAAATGGAGATTACTATGTTGGGGTTAG GGGAGTTGTGTAAATTTGGTTCTGGTCTCTAGATGCAAGGTTTCATGGGAACTTACAGAGATAGTGGCAATTATCTAACT TGGGAGGAAGTCAAGGCTTATCTTAAGAAATTAGGATTAAAGAGCAAAACCGTTGACTTCCTGTCTAGAGAAAGTGAATG GGAAGACTCATCTTACAACCTCCTCTTTGAAGCAAAATGATTTGGACTTGGAGCAGAAGTTATTACTTTTCAACCTCAAG TGGTTTAGTCCAATTTAGGCACGGTGGATTATTGATACCACTTTCTAGCCTCAGGTCCCAAGCCTAGTTGCTCCAAGCGC TTTGGCATCTGGGTTCCTCCTCCACATGGTTGGGTTCCTTCATGAAAGATATTAGGAAGATAGGCGGAACTACTCATGGA AGGAACACTGTCGCTTTTCTCATAGTTTGAGGATTCAATTGGAGGATTTGAAAGTGATGTCTACAAGGTGTGACCTATGA TAATTAGATGATGAAAGTTGTGTAAATATGAGGGGATGTGTATAGCATTAGTTATTTTTCCTGCTACAGGAGGCTGTTGC TGCCATTTCTCAGGCTAGAAGAGATCCAAAAGCAGCAATGCTTGTTCTATGATCCAACTGGGGTTTTGCAAAATCTTCTG CAGCATGCTACTTTGGATCATTCAGGCTTTACATTGTATATATTTTAGGATTTAGGTTCAACATTCAACTCCAAGACATT CATTGCAAGTACACTGCAGAAGGCTGCAACCACCTCTTATCCCGTATTTGGGAACACATTAGCAGGTCATGGTTACGTCT CAAAATCACATATCAAGCGAAGCTACAAGTTGTACCATCCGCTATTTTTTCCAGCACATTGTTATTATTCAATTATCAGA TCAATTGCTGTGTATACCAATTTACTCAATTGTTGAGAGAAATAATGTATTATTTGAGTCTGTAACATGATATTACGATT GACCATATAACTGATCCTGTTTAATAAAAAAAAATGCTTTGGGTTGGGTGACTATATACTATTAGCACATAATTCGCATT ATTCTAATTCCCTTCTCTTACTATTATTGCAGAGACTGTTTTTTAAATGACCTTTCAAAT
CDS sequence (LotjaGi4g1v0416500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATCGATTCCGATTCCGATTCCGATTCCGATTCCACTCCCAACAAGAAGCAGAGAACCACCGTCGTATTGAACCATTT CGATGTCCCTCTGATTTCCTCCGCCTCCAACGGCGTCGTTTCGCCCTGCGACTCCATGCGCCTCCACGCGGACTACCCGT ACTCGATCGGCCGAAAACCTCGCGACTGCGACTTCGTCTTCCATGACCGCCGCGTCAGCAAGCGCCATTGCCAGATCTTC TTCGACGGTTCCCTCCGCAAGCTCTACCTTCTGAGCGGAGTTCTGTCAAATAGCGATTGCTCTACCATCACCACCAACGC TCATCTTGTTCACGAGTTCCGGAAAAGGGTAGTGATGGGGTCTCGCGGCAGTGACCGTATTCCGTTTCGAGAAGCTTCCA ACGGGGTTTTCGTGAACGGAGTCGAGATCGGGAAGGGAATGGCGGTGGAGTTATCGGCTGGAGATAGGGTTTCGTTGGTT TGTGGAAACCAGAGCGGTTCTTGTGATGTTGGGAATCGGATAGGATTTGTTGTTCAGAGGATTGTCCTTGAAGGGTGTGA ATGGGATCGTGATGGTGGTGGTGATAGTGTTGAAATTGATGGGTTAACGTTCTCGGGCCATTCGCAAAGTGGGAAGCGAA GCAAGAGGGTTTTTGCTGTGAAGGTTGGTGTTTCGAGATGTGAGGGTGTTGTTGGGAGAGCAAGGTTTCTTCTAGATAAG TGTAGAGACATATTGCTCAGTGATGATCCTTTGTCTTGCATTTCGCGTGCGGTTTCGGATTTACCATCAAGGGTGGTGGA AAACACAAGTACTAGTGGAGGTGGTGTTGGACTGTCAAGTTCAGCTATGCTTTGTGAGAGTAAAGTGATGGATTTGGAGG CAAAAAGTGAGCATTTTGGTGGAAGAGGGAATGCGGGGGTTGCTTGTGTGAGTGCTATGGATGATAACAATCATGATGCG GCGCTGCGAGATTCTGTAGCGAAGGATAGTCTTCCTTCTTGTGGCGCGTTTCATCCACCGCCCGGGAAGAATTTTTACCT GAATCGCCTTGAGTTGATGGACCATGGGTCCTCCTCGGGTCTTCATCATTCCATATCTCTCCCTGAGCTTATTTATCCTG TTGAAAGCATTTCAAGGATGTTCATTGCAACATTTACAAGTGACATAAAATGGTTCTTGACATATTGTAAGATCCCTTTT CATCTGCCAGTTACGATTGCTTGTCACAATACTGAGAGATGTTGGAGTTCAAGGCCAGATGAAAGAGAATTTGTGCCTTA TCAGGATTATCCTAACCTAGTTGTAGTGTGTCCTCCATTCCCGGAAACCATAGCATTTGGCAATAACCGCAAAAAACAGG GGATTGCTTGCCATCATCCAAAGTTGATTGTTGTGCAAAGAGAAGATAGTATTCGAGTTGTCATTACATCTGCAAATTTG GTGGAAAAGCAGTGGAACTATGTGACTAACACTATATGGTGGCAAGATTTCCCTCGCGGCAATTCTGTTGACTTTGCGTC ACTTTTCCCAAAAATTGATGATGGTGAAATCCATAGTGACTCAAAATGTGATTTTGCTGCTCAGTTGGCTGGGTTTATGG CATCTCTTGTTATTGATGTACCTAGCCAGGCTCAGTGGATTACTCAGTTGACAAAATATGACTTTGAAGGTGCAACAGGA CATCTTGTTGCTTCAGTACCTGGAATTCACTTTTACAGAACTTCTGTTCTGTTGGAATCATTTCAGACATCTCCTTTTCT TGGTTCAGTTGTGGCATCTGTGGTGGGTTTGAGCCATCTTTTCCGTACTGTAGCGGACTCAAACAGTGCAAGACTAAAAA CACTGGCTGTTTTTCTTAGAAAGTCTTGTAGGAAGGCTAATGGGTGGTTGGAGATTGTTTTAAGGAGAAATTCCAGTGTG CCTGCTGATAAAAATGCTGTTAGCGTTCTTATTCCGAACCCTGATGAAACTTCTGAGGGAGACTATGTTCAACTTGGTTT TCTGCCTAGAGATGTGGCGAAATGGATTTCTCCTCTTTGGGATGCTGGATTCTTCATATTTTCTGGATGTGTTTGTCCAG TAGAGGCCCTCGCAGCTGCCTTAGGAGAGAACTCCAAGAAAGTTCAACTGATACTAAATGTGTCAGAGGGGCCTCATTTT CAAGATATGCCAAAGATGATGCAATCTGAACAAATTGTCGCATTTTGCTCGCTCATTGCTTCTATTCAAAGATGTTATGG CCTCTGGAGATTACAAGAGGTTCTGAATCGATATAGATGGCCTGAATCATTAGAGTCTGAAATTATTTATGGTGCATCTT CTATTGGTTCATCTGTCAATTCAAAATTTCTCGCAGCATTTTCGGCTGCTGCTGGGAAGAAATCATTGCAACATTTTGAT TCAGAAGAGTCTGATCCAGAATGGGGCTGCTGGAATGCAAACGAAGAATTGAAGAATCCTTCTGTGTGGATTATTTTCCC CACTATTGAAAGAGTTAAGAATGCTTATAATGGGATTTTGCCGTCAAGACGCATGCTCTGCTTCGCAGAGAGAACATGGC AAAGGTTGAAGACTTTTGATGTACTCCGTGATGCCATCCCTCATCCCTGCGAAAGAATAGGGCATCCAATGCATACTAAG GTGATACGTAGATGCTTCTGGTCTAAGGGGGATGCACCTTCCATTGGTTGGGTATACTGTGGCTCTCATAATTTTAGCGC TGCTGCCTGGGGGCGACAAATTTCAAATCCATTTGGTACAAAAGCCAGTGAACCTAAAAAGGTGGACCCTTCAGTGAATT CCGGCCTTCACATTTGCAATTATGAACTTGGGATTATATTTACCTTTCCTCCAATAGAAAATAACTATTGTTCTGAAGTT CAAAGAACCAAACTAGATGATATAATTCTTCCGTTTGTTGTGCCTGCACCTAAATATGGTTTTAGAGATAGGCCAGCTAC TATGCAAGCTATGAGGGAGGCTATGGCTGAACTTAATAAACTAGAGGAGAAAAATGCTGAAGAAGAATTGATGGAAGAAG ACCTTCTTGAGGAAGAGGAAGAAATGGAAGCAACCAATAATGTTGGAGAGGAGATGGAAGAGGAAAAGGCATATGCTGAG ATACTCTGGAGTCAGGTTGATTCTTCCCAGAGCAGTTGA
Protein sequence (LotjaGi4g1v0416500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIDSDSDSDSDSTPNKKQRTTVVLNHFDVPLISSASNGVVSPCDSMRLHADYPYSIGRKPRDCDFVFHDRRVSKRHCQIF FDGSLRKLYLLSGVLSNSDCSTITTNAHLVHEFRKRVVMGSRGSDRIPFREASNGVFVNGVEIGKGMAVELSAGDRVSLV CGNQSGSCDVGNRIGFVVQRIVLEGCEWDRDGGGDSVEIDGLTFSGHSQSGKRSKRVFAVKVGVSRCEGVVGRARFLLDK CRDILLSDDPLSCISRAVSDLPSRVVENTSTSGGGVGLSSSAMLCESKVMDLEAKSEHFGGRGNAGVACVSAMDDNNHDA ALRDSVAKDSLPSCGAFHPPPGKNFYLNRLELMDHGSSSGLHHSISLPELIYPVESISRMFIATFTSDIKWFLTYCKIPF HLPVTIACHNTERCWSSRPDEREFVPYQDYPNLVVVCPPFPETIAFGNNRKKQGIACHHPKLIVVQREDSIRVVITSANL VEKQWNYVTNTIWWQDFPRGNSVDFASLFPKIDDGEIHSDSKCDFAAQLAGFMASLVIDVPSQAQWITQLTKYDFEGATG HLVASVPGIHFYRTSVLLESFQTSPFLGSVVASVVGLSHLFRTVADSNSARLKTLAVFLRKSCRKANGWLEIVLRRNSSV PADKNAVSVLIPNPDETSEGDYVQLGFLPRDVAKWISPLWDAGFFIFSGCVCPVEALAAALGENSKKVQLILNVSEGPHF QDMPKMMQSEQIVAFCSLIASIQRCYGLWRLQEVLNRYRWPESLESEIIYGASSIGSSVNSKFLAAFSAAAGKKSLQHFD SEESDPEWGCWNANEELKNPSVWIIFPTIERVKNAYNGILPSRRMLCFAERTWQRLKTFDVLRDAIPHPCERIGHPMHTK VIRRCFWSKGDAPSIGWVYCGSHNFSAAAWGRQISNPFGTKASEPKKVDPSVNSGLHICNYELGIIFTFPPIENNYCSEV QRTKLDDIILPFVVPAPKYGFRDRPATMQAMREAMAELNKLEEKNAEEELMEEDLLEEEEEMEATNNVGEEMEEEKAYAE ILWSQVDSSQSS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 14 | 1051 | 1038 | 0.0 | ||
| PANTHER | 14 | 1051 | 1038 | 0.0 | – | |
| CDD | 41 | 159 | 119 | 2.50733E-12 | ||
| SUPERFAMILY | 44 | 160 | 117 | 1.55E-14 | ||
| SMART | 53 | 109 | 57 | 0.0025 | ||
| Pfam | 54 | 159 | 106 | 2.2E-12 | ||
| ProSiteProfiles | 54 | 143 | 90 | 10.571 | ||
| Gene3D | 342 | 558 | 217 | 9.7E-29 | – | |
| SUPERFAMILY | 342 | 557 | 216 | 3.14E-36 | – | |
| Pfam | 360 | 571 | 212 | 6.5E-23 | ||
| CDD | 365 | 532 | 168 | 1.66719E-37 | – | |
| Pfam | 587 | 705 | 119 | 2.0E-17 | ||
| SMART | 587 | 712 | 126 | 2.8E-4 | ||
| SUPERFAMILY | 736 | 997 | 262 | 7.46E-41 | – | |
| Gene3D | 737 | 999 | 263 | 5.8E-23 | ||
| Pfam | 743 | 979 | 237 | 6.8E-25 | ||
| CDD | 748 | 947 | 200 | 6.41206E-39 | – | |
| Coils | 984 | 1035 | 52 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Biological process | DNA repair | The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway. | ||
| Molecular function | Phosphoric diester hydrolase activity | Catalysis of the hydrolysis of a phosphodiester to give a phosphomonoester and a free hydroxyl group. | ||
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. | ||
| Molecular function | Hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | Catalysis of the hydrolysis of any acid anhydride which contains phosphorus. |
Expression pattern of LotjaGi4g1v0416500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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