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IPR014905

Source: InterPro

Description

IPR014905 is a HIRAN domain.

<p>The HIRAN domain (HIP116 Rad5p N-terminal) is found in the N-terminal regions of the SWI2/SNF2 proteins typified by HIP116 and Rad5p. HIRAN is found as a standalone protein in several bacteria and prophages, or fused to other catalytic domains, such as a nuclease of the restriction endonuclease fold and TDP1-like DNA phosphoesterases, in the eukaryotes [[cite:PUB00035408]]. It has been predicted that this protein functions as a DNA-binding domain that probably recognises features associated with damaged DNA or stalled replication forks [[cite:PUB00035408]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003676
Molecular function Nucleic acid binding Interacting selectively and non-covalently with any nucleic acid.
Subterm of
GO:0008270
Molecular function Zinc ion binding Interacting selectively and non-covalently with zinc (Zn) ions.
Subterm of
GO:0016818
Molecular function Hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides Catalysis of the hydrolysis of any acid anhydride which contains phosphorus.
Subterm of

Associated Lotus transcripts 15

Transcript Name Description Predicted domains Domain count
Lj0g3v0004669.1
– DNA/RNA helicase protein isoform 1 [Theobroma cacao] gi|508786331|gb|EOY33587.1|
Domains
15
Lj0g3v0004669.2
– DNA/RNA helicase protein isoform 1 [Theobroma cacao] gi|508786331|gb|EOY33587.1|
Domains
15
Lj0g3v0238359.1
– DNA/RNA helicase protein isoform 2, partial [Theobroma cacao] gi|508786332|gb|EOY33588.1|
Domains
4
Lj0g3v0282239.1
– Helicase protein with RING/U-box domain [Theobroma cacao] gi|508714076|gb|EOY05973.1|
Domains
31
Lj1g3v4104770.1
– DNA repair protein RAD5 [Medicago truncatula] gi|357509293|ref|XP_003624935.1|
Domains
29
Lj4g3v1287420.1
– Tyrosyl-DNA phosphodiesterase [Medicago truncatula] gi|357520291|ref|XP_003630434.1|
Domains
15
Lj4g3v1287420.2
– Tyrosyl-DNA phosphodiesterase [Medicago truncatula] gi|357520291|ref|XP_003630434.1|
Domains
21
Lj4g3v2860600.1
– Tyrosyl-DNA phosphodiesterase [Medicago truncatula] gi|357520291|ref|XP_003630434.1|
Domains
15
Lj4g3v2860600.2
– Tyrosyl-DNA phosphodiesterase [Medicago truncatula] gi|357520291|ref|XP_003630434.1|
Domains
14
LotjaGi1g1v0531200.1
– Fanconi-associated nuclease 1 like; TAIR: AT1G48360.2 zinc ion binding/nucleic acid binding/hydrolase; Swiss-Prot: sp|Q5XVJ4|FAN1_ARATH Fanconi-associated nuclease 1 homolog; TrEMBL-Plants: tr|G7KUQ4|G7KUQ4_MEDTR Fanconi-associated nuclease-like protein; Found in the gene: LotjaGi1g1v0531200
Domains
15
LotjaGi1g1v0660800.1
– DNA/RNA helicase; TAIR: AT5G05130.1 DNA/RNA helicase protein; Swiss-Prot: sp|Q9FF61|SM3L1_ARATH Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1; TrEMBL-Plants: tr|G7L5V8|G7L5V8_MEDTR DNA/RNA helicase; Found in the gene: LotjaGi1g1v0660800
Domains
32
LotjaGi3g1v0172500.1
– DNA/RNA helicase; TAIR: AT5G22750.1 DNA/RNA helicase protein; Swiss-Prot: sp|Q9FNI6|SM3L2_ARATH Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; TrEMBL-Plants: tr|A0A072VAY9|A0A072VAY9_MEDTR DNA/RNA helicase; Found in the gene: LotjaGi3g1v0172500
Domains
29
LotjaGi3g1v0172500.2
– DNA/RNA helicase; TAIR: AT5G22750.1 DNA/RNA helicase protein; Swiss-Prot: sp|Q9FNI6|SM3L2_ARATH Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; TrEMBL-Plants: tr|A0A072VAY9|A0A072VAY9_MEDTR DNA/RNA helicase; Found in the gene: LotjaGi3g1v0172500
Domains
29
LotjaGi4g1v0416500.1
– Tyrosyl-DNA phosphodiesterase 1; TAIR: AT5G07400.1 forkhead-associated domain-containing protein / FHA domain-containing protein; Swiss-Prot: sp|Q9NUW8|TYDP1_HUMAN Tyrosyl-DNA phosphodiesterase 1; TrEMBL-Plants: tr|G7LGI2|G7LGI2_MEDTR Tyrosyl-DNA phosphodiesterase; Found in the gene: LotjaGi4g1v0416500
Domains
21
LotjaGi6g1v0006600.1
– DNA/RNA helicase protein; TAIR: AT5G43530.1 Helicase protein with RING/U-box domain-containing protein; Swiss-Prot: sp|Q9FIY7|SM3L3_ARATH Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3; TrEMBL-Plants: tr|A0A072VHP2|A0A072VHP2_MEDTR DNA repair helicase rad5,16, putative; Found in the gene: LotjaGi6g1v0006600
Domains
32

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 6.67