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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0428300 |
| Transcript ID | LotjaGi4g1v0428300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein (TIR-NBS class); TAIR: AT4G23440.1 Disease resistance protein (TIR-NBS class); Swiss-Prot: sp|Q9KGG1|RADA_BACHD DNA repair protein RadA; TrEMBL-Plants: tr|K7L4F5|K7L4F5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0428300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:80267471..80272436) extracted from Lotus japonicus Gifu genome v1.2.
GTCACCCTTATCCAGCAAAGTACAAAACACCACGTTTTGCCTTGGACTATCTTAATCAAAGCAACCTTGTAAGCACCCAC AAAACCAAAAAAAAAACACAAAATTAAAATTTAAAATAAACAAAAGCCAAGAACTTTAACAATGTGTCATGTGTGTGTGT GCATCCATCCAAATGCTGAAATCACAGTGGCCATCTGCAAGATTTAACAGTTGTATAAATGGGTGTGGAGCCTACTGTGA TTCCACCATACCCAAGTCAGATCCATTGCCTTCTTCCCCCTTGACACCCATTTCTGAACCTCTCAGGCCAATAATAAAAA TGCCAAAGATTTGAAAACACAAACCAGAGTTGTCACAGAAAAATCATAGCATTAGATAAAAAAGACTATCTTTTTATGCT TACAACACCAGCTAGAGCTTCTGCACCCACAAAGACTTGTTTTTTCTTCTCCCCTGCTAATAAAGGTTGGTGCTTTAGCA TTCATTTTCATTCAGTTTATCTTTTTCTAAAATGGGTATCTTCAAAAGACCATGATTTCTCAATCTCACCTCATTCAATA GCTTAGCTAAGGTTTGGTGTTTATAGTAATGAAGGTGTGTTTCTTAATTTTTGTTTGGTAGTTTGATTGAGTTTGGTTTT GTTATGTTACAGTGCCTAGAAATCTGAATGCTTGATCATGTTGACCTTTGTAGAAAAATTAAGATTGGTTGGTTGGAGGC AAAACAGTGATTGTACGGTCTGGTGCTTCAGTTTCAAAGCCTAGTAAGTATTCAGATCTGAACCACAAAATGTAGTTTTA TCAATCATCAATTTTATGGTTTGTGGATGTTTTATGTTTTTCTTCTCTATGATGACTTCTTGCTTGCTTTTGAATTTGGT TGGTGAATTTTACTTAACCACTGTTTTGTGGTTTTAAGTGGGTTGAGTTGAGTTGTGCCTTTCTGATTTTTGGAGTCCTT TTTATTGTATGCAACAACAGTAAATGTCACAAAGTGATGCTACGTTTCCTTGTGTGTTCTGTGCAGTGCCAAAATCTTGT TGTAAAGTAAATATTCCATTTAAGTTGTTGACTCTTGCTTCTTACCAATGGTAATTACTGTTTATCAATTGACAATTTTA ATTTTTTTTCCCTTTTAGAAATTTTGAGGTCTAACTTTAGATGATGGTTGCACTGTTAACTTTTTCTTAAAAGAACCACT TTGTCTGGCTTTTCTCCTTCTCTTACTTTGTTCTTTAGACAATGACATATTTTAAGTACCATACACAAAACATGTAATGT AGAAATGTAGAATATACATGGCATGTTGCATCAGCTTATTTTTTTCTAAGAAACCAATTCTGGCACTCAGAAATAACTCA CATAAGTTTCTTTCCGTAATTGATTCTGGCTTTACAACCAATTGTGTAAGGATTTCCAAACATGGAATAACTTTTGCTTC CTTCTGCCATATTGAAGGGATTGAAATACATCTTGTGACTGATGAAGACATTATCTGAACTTCAGAGGAGCTCGTCCTAT TGATTGTTGGTGCATGGGATTTGATATCTTCCATAATTGGCCAAAACACCATCTCTACCTGCAAGCATGGATACTCAAGA AGAGAGTTCCACTTTTGGACCATTGACAGCAATGAGTTCAAGGAACATGTCATCATCATCTTCAGCATTTTTTTCAGCAA ATCAATCACCATTCTTCTCTCCAAGAACATCATCATGTCATTTATCAGAGACTTTGAGACCTGATACACCAAGTGGAAGA ATTCATATAGATGCTGCTGCTCCTCCCAGCACCAGTTCAGTGATTCCAGAACCAAAGTCTCTAGTAAATGCTGGATTTTC CTTCTCTGAGGTGGCTGCATCAGGTGATTTGCAGAAACTTGATCGAATATCTTCTTCTGTTGGCAATGGCATCTCCAGTA GCACCGTATCTGGTTACTGCCATCCCTACGACGATAGTTGTTCTGGAACGAAAGAGAAGCGAAGTAAGAGAGGAAGAAAC CAAAGAACATCATCAACACCGGGTTCCAGATCGATTTCTTCTTACAGACTGAAGAGTTGTGATGTCTTCATAGGATTACA TGGTCGTAAACCTCCTCTACTAAGATTCGCCAATTGGCTCCGCGCCGAGTTGGAAATTCAAGGCATCAGTTGCTTTTTAT CAGACAGGGCTGGATGTAGGAACGCTTTCAAGCTTGGCATTGCAGAGAAAGCTATGGATATTGCTTCTTTTGGGATAGTG ATTATAACGAGGAAGTGTTTCAAGAATCCTTATACCATTGAGGAGCTGCAGTTTTTCTCCGGCAAGAAGAATTTGGTCCC AATATACTTTGATTTGAGTCCTGCTGATTGTCTTGTCAGGGATATAATTGAGAAAAGGGGTGAGCTTTGGGAAAAACATG GAGGGGATCTTTGGTTATTGTATGGTGGGTTGGAACAGGAGTGGAAATATGCGGTTCATGCACTATCTCGGATTGAAGAA TGGAAGTTGGAAGCTCAGGATGGATATTGGAGAGATTGCATACTGAGGGCTGTCACATTATTGGCAATGAGACTAGGCAG AAGAAGTGTTGCTGAGCATTTGACAAAATGGAGAGAAAAGGTGAAGGAAGAGGAGTTACCTTTCACTCGCAATGAGAATT TTATTGGCAGAAAGAAAGAGCTTTCTCAGCTGGAATTTATGCTTTTTGGTGATGTTACCGGAGATTCAAAGCAAGACTAT ATTGAGCTTAAGGCGAGACCGAAGAGAAGGCATTTGACAATCAATCGAGGTAAGAGTAGTGTGCTTGATCAAAGACATAT GGGACATGGTGATGGAAGTAGGGAGCAAAAAGAACAAGTTCTATGGAAGGAGTCAGAAAAAGAGATTGAGATGCAAAGTG TTGAATTTTCTCAGAGGCCCCATCGTCCAAGGCTCAAACGTGGTGGAAAGTATTCTAGAAGAAAAAGAGGAATGAATATT TTGTATGGGAAAGGGATTGCCTGTGTATCAGGAGATTCAGGAATTGGAAAAACTGAACTCATTCTTGAGTTTGCTTACAG ATTTCACCAGAGATACAAAATGGTTTTATGGATAGGAGGGGAGAGCAGGTATATAAGGCAAAATTATCTAAACCTCAGGT CCTTTTTAGAAGTTGATGTGAGTGTTGAGAATAGCTTGGAGAAAACTCGGATAAGAGGATTTGAAGAGCAGGAAGAAGCA GCAATTTCTCGAGTTCGCAAAGAGCTGATGAGAAACGTTCCATATCTCGTGATCATTGATAACTTGGAGAGCGAAAATGA TTGGTGGGATCACAAACTTGTAATGGATCTTCTCCCTCGTTTTGGCGGAGTGACCCATGTGATCATATCTACACGCCTTC CTCGCATCATGAACTTGGAACCTTTGAAGCTCTCGTACTTATCTGGAGTTGAAGCAATGTCTCTAATGCTGGGAAGTGGC AAGGACTATCCAGTTGCAGAGGTTGATGCTCTGAGATCTATTGAAGAGAAGCTTGGAAGGTTAACTTTGGGCCTAGCTAT TATTGGTGGAATTTTATCCGAGTTGCCGATAACTCCAAGCAGGCTCTTGGACACCATAAACAGAATGCCATTGAAGGAAA TGTCATGGAGCGGTAAAGAAGCTCAATCACTCAGGCAGAACACTTTCCTTCTTCAACTCTTCGATGTTTGTTTCTCAGTA TTTGATCACGCAGATGGCCTGAGGAGCTTGGCAACGCGAATGGTGCTGGTAAGTGGATGGTTTGCACCTGGTGCGATTCA AATTTCATTGTTGGCACTCGCTGCGTACAAGATACCAGAAAAGCATAAGAGGACTTGTTTCTGGAAAAAATTACTGCAAT GCTTGTTCACATCCTCAAACACCAAAAAAACTGAGCTAGAAGCATCTTCTCTGCTACTAAGATTTAACATTGCAAGGAGT AGTACTAAGCAAGGATACATCCAATTCAACGAGCTCATCAAACTCTATGCGCGGAAAAGAGATGTCACCGGATCCGCGCA GGCAATGGTTCATGCTGTTATAAGTCAAGGATCAATGTCTCAAAATCTTGAGCATTTATGGGCTGCTTGCTTTCTGCTAT TTGAATTTGGTCATAATCCTGCAATTGTTGAGCTCGAGGTTTCTGAGGTTTTACTTCTCGTTAAAAAAGTGGTTCTGCCT CTCGCAATTCACACTTTCATCACATACTCGCGATGCAGCGCTTCCCTTGAGCTTCTGCACCTGTGCACCAACGCGCTGGA AGCTGCTGACCAAGCATTAGTTACTCCGGTCGACAAGTGGTTGGACAAATCACTTTGTTGGAGGTCCATAAAAACTAATG CTCAGTTGAATCCTTGTCTTTGGCAAGAGCTGGCTTTATGCAGAGCCACTGTGCTTGAGACTAGGGCCAAGCTAATGCTA AGAGGTGCACAATTTGACATAGGGGATGATCTGATCCGGAAGGCCGTTTTTATCAGGGCTTCAATTTGTGGTGAAGATCA TCCCGATACCATATCCGCGCGTGAAACATTGAGCAAACTCACCAGACTAACTGCAAGTGTTCAAATTCATGCTTGAGTTT ATTAGGTTTTGCATCTTGTAAGGAAACTCTAGAGTTATACAAAAGATTTTATAATAAAACTAGTTCTGTATACTTTTTGT TGAAAGTTTCAACAGCATAATTTACAAGTCTTATATGAGACATCTTCCATTTTTTAAATGTATTCCATCTCCTCTTGGTT ATTTTGACATGTTTAGTGCTGTAATCACCAAGTAATTGTATTTTTAATTTTTTTTAACTGTGGAAGTCAAAGCCTTTGAA GCACCAATATGAACCATGTGGTAGTTCCAGGATGATGCTGTCATGTTTGGGGGTGCTAGATCCTTATATGCAGTATGTCT TCACTTCAAATTGTTGGTTCCATTTCTGAGTTCAAAATGTAATGTTTGCTGAATGAGAACATGTTAGTTAACAACGCTGG TTCCCT
CDS sequence (LotjaGi4g1v0428300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATACTCAAGAAGAGAGTTCCACTTTTGGACCATTGACAGCAATGAGTTCAAGGAACATGTCATCATCATCTTCAGC ATTTTTTTCAGCAAATCAATCACCATTCTTCTCTCCAAGAACATCATCATGTCATTTATCAGAGACTTTGAGACCTGATA CACCAAGTGGAAGAATTCATATAGATGCTGCTGCTCCTCCCAGCACCAGTTCAGTGATTCCAGAACCAAAGTCTCTAGTA AATGCTGGATTTTCCTTCTCTGAGGTGGCTGCATCAGGTGATTTGCAGAAACTTGATCGAATATCTTCTTCTGTTGGCAA TGGCATCTCCAGTAGCACCGTATCTGGTTACTGCCATCCCTACGACGATAGTTGTTCTGGAACGAAAGAGAAGCGAAGTA AGAGAGGAAGAAACCAAAGAACATCATCAACACCGGGTTCCAGATCGATTTCTTCTTACAGACTGAAGAGTTGTGATGTC TTCATAGGATTACATGGTCGTAAACCTCCTCTACTAAGATTCGCCAATTGGCTCCGCGCCGAGTTGGAAATTCAAGGCAT CAGTTGCTTTTTATCAGACAGGGCTGGATGTAGGAACGCTTTCAAGCTTGGCATTGCAGAGAAAGCTATGGATATTGCTT CTTTTGGGATAGTGATTATAACGAGGAAGTGTTTCAAGAATCCTTATACCATTGAGGAGCTGCAGTTTTTCTCCGGCAAG AAGAATTTGGTCCCAATATACTTTGATTTGAGTCCTGCTGATTGTCTTGTCAGGGATATAATTGAGAAAAGGGGTGAGCT TTGGGAAAAACATGGAGGGGATCTTTGGTTATTGTATGGTGGGTTGGAACAGGAGTGGAAATATGCGGTTCATGCACTAT CTCGGATTGAAGAATGGAAGTTGGAAGCTCAGGATGGATATTGGAGAGATTGCATACTGAGGGCTGTCACATTATTGGCA ATGAGACTAGGCAGAAGAAGTGTTGCTGAGCATTTGACAAAATGGAGAGAAAAGGTGAAGGAAGAGGAGTTACCTTTCAC TCGCAATGAGAATTTTATTGGCAGAAAGAAAGAGCTTTCTCAGCTGGAATTTATGCTTTTTGGTGATGTTACCGGAGATT CAAAGCAAGACTATATTGAGCTTAAGGCGAGACCGAAGAGAAGGCATTTGACAATCAATCGAGGTAAGAGTAGTGTGCTT GATCAAAGACATATGGGACATGGTGATGGAAGTAGGGAGCAAAAAGAACAAGTTCTATGGAAGGAGTCAGAAAAAGAGAT TGAGATGCAAAGTGTTGAATTTTCTCAGAGGCCCCATCGTCCAAGGCTCAAACGTGGTGGAAAGTATTCTAGAAGAAAAA GAGGAATGAATATTTTGTATGGGAAAGGGATTGCCTGTGTATCAGGAGATTCAGGAATTGGAAAAACTGAACTCATTCTT GAGTTTGCTTACAGATTTCACCAGAGATACAAAATGGTTTTATGGATAGGAGGGGAGAGCAGGTATATAAGGCAAAATTA TCTAAACCTCAGGTCCTTTTTAGAAGTTGATGTGAGTGTTGAGAATAGCTTGGAGAAAACTCGGATAAGAGGATTTGAAG AGCAGGAAGAAGCAGCAATTTCTCGAGTTCGCAAAGAGCTGATGAGAAACGTTCCATATCTCGTGATCATTGATAACTTG GAGAGCGAAAATGATTGGTGGGATCACAAACTTGTAATGGATCTTCTCCCTCGTTTTGGCGGAGTGACCCATGTGATCAT ATCTACACGCCTTCCTCGCATCATGAACTTGGAACCTTTGAAGCTCTCGTACTTATCTGGAGTTGAAGCAATGTCTCTAA TGCTGGGAAGTGGCAAGGACTATCCAGTTGCAGAGGTTGATGCTCTGAGATCTATTGAAGAGAAGCTTGGAAGGTTAACT TTGGGCCTAGCTATTATTGGTGGAATTTTATCCGAGTTGCCGATAACTCCAAGCAGGCTCTTGGACACCATAAACAGAAT GCCATTGAAGGAAATGTCATGGAGCGGTAAAGAAGCTCAATCACTCAGGCAGAACACTTTCCTTCTTCAACTCTTCGATG TTTGTTTCTCAGTATTTGATCACGCAGATGGCCTGAGGAGCTTGGCAACGCGAATGGTGCTGGTAAGTGGATGGTTTGCA CCTGGTGCGATTCAAATTTCATTGTTGGCACTCGCTGCGTACAAGATACCAGAAAAGCATAAGAGGACTTGTTTCTGGAA AAAATTACTGCAATGCTTGTTCACATCCTCAAACACCAAAAAAACTGAGCTAGAAGCATCTTCTCTGCTACTAAGATTTA ACATTGCAAGGAGTAGTACTAAGCAAGGATACATCCAATTCAACGAGCTCATCAAACTCTATGCGCGGAAAAGAGATGTC ACCGGATCCGCGCAGGCAATGGTTCATGCTGTTATAAGTCAAGGATCAATGTCTCAAAATCTTGAGCATTTATGGGCTGC TTGCTTTCTGCTATTTGAATTTGGTCATAATCCTGCAATTGTTGAGCTCGAGGTTTCTGAGGTTTTACTTCTCGTTAAAA AAGTGGTTCTGCCTCTCGCAATTCACACTTTCATCACATACTCGCGATGCAGCGCTTCCCTTGAGCTTCTGCACCTGTGC ACCAACGCGCTGGAAGCTGCTGACCAAGCATTAGTTACTCCGGTCGACAAGTGGTTGGACAAATCACTTTGTTGGAGGTC CATAAAAACTAATGCTCAGTTGAATCCTTGTCTTTGGCAAGAGCTGGCTTTATGCAGAGCCACTGTGCTTGAGACTAGGG CCAAGCTAATGCTAAGAGGTGCACAATTTGACATAGGGGATGATCTGATCCGGAAGGCCGTTTTTATCAGGGCTTCAATT TGTGGTGAAGATCATCCCGATACCATATCCGCGCGTGAAACATTGAGCAAACTCACCAGACTAACTGCAAGTGTTCAAAT TCATGCTTGA
Protein sequence (LotjaGi4g1v0428300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDTQEESSTFGPLTAMSSRNMSSSSSAFFSANQSPFFSPRTSSCHLSETLRPDTPSGRIHIDAAAPPSTSSVIPEPKSLV NAGFSFSEVAASGDLQKLDRISSSVGNGISSSTVSGYCHPYDDSCSGTKEKRSKRGRNQRTSSTPGSRSISSYRLKSCDV FIGLHGRKPPLLRFANWLRAELEIQGISCFLSDRAGCRNAFKLGIAEKAMDIASFGIVIITRKCFKNPYTIEELQFFSGK KNLVPIYFDLSPADCLVRDIIEKRGELWEKHGGDLWLLYGGLEQEWKYAVHALSRIEEWKLEAQDGYWRDCILRAVTLLA MRLGRRSVAEHLTKWREKVKEEELPFTRNENFIGRKKELSQLEFMLFGDVTGDSKQDYIELKARPKRRHLTINRGKSSVL DQRHMGHGDGSREQKEQVLWKESEKEIEMQSVEFSQRPHRPRLKRGGKYSRRKRGMNILYGKGIACVSGDSGIGKTELIL EFAYRFHQRYKMVLWIGGESRYIRQNYLNLRSFLEVDVSVENSLEKTRIRGFEEQEEAAISRVRKELMRNVPYLVIIDNL ESENDWWDHKLVMDLLPRFGGVTHVIISTRLPRIMNLEPLKLSYLSGVEAMSLMLGSGKDYPVAEVDALRSIEEKLGRLT LGLAIIGGILSELPITPSRLLDTINRMPLKEMSWSGKEAQSLRQNTFLLQLFDVCFSVFDHADGLRSLATRMVLVSGWFA PGAIQISLLALAAYKIPEKHKRTCFWKKLLQCLFTSSNTKKTELEASSLLLRFNIARSSTKQGYIQFNELIKLYARKRDV TGSAQAMVHAVISQGSMSQNLEHLWAACFLLFEFGHNPAIVELEVSEVLLLVKKVVLPLAIHTFITYSRCSASLELLHLC TNALEAADQALVTPVDKWLDKSLCWRSIKTNAQLNPCLWQELALCRATVLETRAKLMLRGAQFDIGDDLIRKAVFIRASI CGEDHPDTISARETLSKLTRLTASVQIHA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 987 | 987 | 0.0 | – | |
| PANTHER | 1 | 987 | 987 | 0.0 | – | |
| MobiDBLite | 1 | 27 | 27 | - | – | |
| Phobius | 1 | 711 | 711 | - | – | |
| Gene3D | 122 | 272 | 151 | 1.4E-9 | ||
| MobiDBLite | 123 | 150 | 28 | - | – | |
| SUPERFAMILY | 156 | 254 | 99 | 3.92E-7 | ||
| SUPERFAMILY | 337 | 666 | 330 | 1.62E-13 | ||
| Gene3D | 452 | 598 | 147 | 4.8E-11 | – | |
| SMART | 461 | 615 | 155 | 0.0025 | ||
| Phobius | 712 | 734 | 23 | - | – | |
| Phobius | 735 | 989 | 255 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0428300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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