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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0432600 |
| Transcript ID | LotjaGi4g1v0432600.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like kinase; TAIR: AT4G23740.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|Q9SUQ3|Y4374_ARATH Probable inactive receptor kinase At4g23740; TrEMBL-Plants: tr|I1KPH8|I1KPH8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0432600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:80713822..80716564) extracted from Lotus japonicus Gifu genome v1.2.
AGTGAAACACCTCGTTCTCTGCTCCTGCTCCTGCTGCTGCTGGTGGAAGTGGACAACAATGGAGTTTCAATTTCTAAGCA TTTTCTGTTGCATTTCCTTGTTGGGTTTGTTTATGCTACAAGGATATGCTGAACCTGTTGAAGATAAGGAGGCTTTGCTT GATTTTGTGAACAAGTTTCCTCCTTCTAGGCCTCTGAATTGGAATGGAAGCTTCTCCATGTGTGCTTCTTGGACTGGTGT GACTTGCAATGAAGATAAGTCTAGAGTAATAGCTATTAGATTGCCAGGGGTTGGTTTTCATGGTAGCATCCCTGCTAACA CCATTAGCCGCCTCTCAGGGCTTCAAACTTTGAGCCTTAGATCCAATGTGATAACTGGGCAGTTTCCTTCTGATTTCTCC AATCTCAAAAACTTGTCTTTTCTCTACCTCCAGTTCAACAAATTGTCTGGTCCTTTACCTGATTTCTCAGCTTGGAAGAA CCTTACTGTTGTTAATTTGTCCAATAATCACTTCAATGGCACCATTCCTGTTTCCATTTCTAATTTGACTCAGCTTGCTG GTTTGAATCTTGCAAACAACTCTCTTTCTGGTGAAATTCCTGGTCTACAGTCCTCCAGATTGCAGCTGCTGAATTTGTCC AACAACCACTTGCAGGGTAGTGTGCCTAAATCGCTTATGAGGTTTCCTGAGTCTGCGTTCTTCGGAAATAACATCTCTCT TGGAAATTCCTCTGCGGTTTCGGTGCCACCTCTGCCAGATAATGAGCCATCTTCAACATCTAAGAAAGGTGGAAGGCTTA AGGAGGCTGCACTGCTAGGAATTATTGTTGCTTGTAGTGTTCTAGTCCTTGTGGCATTTGTTCTTTTGTGGTTTGTGTGC TGCTCTAGAAGAAAGGGGGATGAAGATGAAGCCTTCAGTGGGAAGTTGCGCAAGGGAGGAATGTCTCCGGAGAAAACAGT CTCAAGGGACCAGGATGCAAATAATAAAATGGTTTTCTTTGAGGGATGTAGTTATGCCTTTGATTTGGAGGATTTGTTGA GGGCTTCTGCTGAGGTACTAGGAAAAGGAACATTCGGTACTGCATACAAGGCGATACTAGAGGACGCAACGATGGTTGTT GTGAAGAGGTTAAAGGAGGTAGCTGTTGGAAAGAAGGATTTTGAGCAGCACATGGATGTTGTAGGAAGTCTTAAGCATGA GAATGTGGCTGAGCTGAAGGCATATTATTATTCCAAAGATGAGAAACTGATGGTTTATGATTACTACAGTCAGGGGAGTG TCTCTTCTATGTTGCATGGTATGTTCCATTACTTTAGCACATTGCAATTTTATGTGTCCTCCAATGGACTATGTTTTTCC ACATGGTATGTTTAAATCAATTGCAAATAAAGAAACATGTGCACATATTTTCCATTTTAGATAAAGGTGATGTTCATCAT AGAAAGGGTCTTTTGCTTCTTCAAGTAGCTTGCTGTACTTCTTCACCTCTCTAGCTTAGTTTTAGCTACTCGCAATTGAA ATAGGAATGTATTCTTTGGCTTCCATGTTAGTGCTTTCAGAAACATTGGGATCATTTACATTTTAGGTGATATTATCCGT TCTAGAGCCATAAGTATACATACCTCCCTCCCTTAATGGGGATTATCTAATTGCTGATGTTTCAATATTTGATTGCTTGT ATAACTTCAATGCATCCATGACATGATAAACATCTCGGAATTTCATACTCTTGCCTCGAGTACATTATACACATCTTTTT CTGTTTTGCTAGAAAAATCTAGATTCAAAATTTGCATATAAATGATCAATTAAATACTGTTTGTCTTGAAAATGTTACTG TAGTACATTCTAGACAAAACACAACTACTACTACTAGCATATTTGGATTGGCTTCTATTTCTTCAGAATCAATTTTGAAA CCCACAAGCTACTGTCAGAAACTTCTTTCTACAATTGATTATGACTTCAAAATCAATTGTAGAAGAATTTTGAAACATGG ACTACATCTATATACAATATACTTTCCTTCTTGTAAAACCATTTTGCTTTCTGAGAATTTCAGGTAAAAGAGGAGAGGAG CGGGTGCCTTTAAATTGGGATACTCGTTTGAAAATAGCTCTAGGTGCTGCCAGAGGCATTGCTCGCATCCATGTTGAGAA TAGTGGGAAGCTTGTGCATGGCAACATCAAGTCTTCAAACATCTTTGTCAATACTAAACAGTACGGTTGTGTATCTGACC TTGGCCTGGCAACCATGTCGAGCTCGCTTCCCCTGCCAATCTCACGAGCTGCCGGTTACCGTGCACCGGAAGTTACAGAC ACGAGGAAAGCAGCCCAGCCTTCAGACGTCTACAGCTTCGGTGTGGTGTTACTGGAGCTTCTGACTGGGAAATCACCTAT CCACACAACTGGTGGTGATGAGATGATCCACCTTGTGAGGTGGGTTCATTCCGTTGTGCGAGAGGAGTGGACAGCTGAAG TGTTTGATTTGGAGCTAATGAGATATCCAAACATAGAAGAAGAGATGGTGGAAATGTTGCAAATAGCCATGTCATGTGTG GTAAGGATGCCTGATCAGAGGCCTAAAATGTCTGAAGTTGTGAAGATGATAGAAAACGTGAGGCAGAATGACACAAAGAC TCAGCAATCATCTGAGAACCAAGCAACACCTAAAATATCTCAACGCGACTATGATAACTCGCCTTCTACTCCATCATCCC CCTTACCAAAAGGAAGTGAATGA
CDS sequence (LotjaGi4g1v0432600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGTGCTTCTTGGACTGGTGTGACTTGCAATGAAGATAAGTCTAGAGTAATAGCTATTAGATTGCCAGGGGTTGGTTT TCATGGTAGCATCCCTGCTAACACCATTAGCCGCCTCTCAGGGCTTCAAACTTTGAGCCTTAGATCCAATGTGATAACTG GGCAGTTTCCTTCTGATTTCTCCAATCTCAAAAACTTGTCTTTTCTCTACCTCCAGTTCAACAAATTGTCTGGTCCTTTA CCTGATTTCTCAGCTTGGAAGAACCTTACTGTTGTTAATTTGTCCAATAATCACTTCAATGGCACCATTCCTGTTTCCAT TTCTAATTTGACTCAGCTTGCTGGTTTGAATCTTGCAAACAACTCTCTTTCTGGTGAAATTCCTGGTCTACAGTCCTCCA GATTGCAGCTGCTGAATTTGTCCAACAACCACTTGCAGGGTAGTGTGCCTAAATCGCTTATGAGGTTTCCTGAGTCTGCG TTCTTCGGAAATAACATCTCTCTTGGAAATTCCTCTGCGGTTTCGGTGCCACCTCTGCCAGATAATGAGCCATCTTCAAC ATCTAAGAAAGGTGGAAGGCTTAAGGAGGCTGCACTGCTAGGAATTATTGTTGCTTGTAGTGTTCTAGTCCTTGTGGCAT TTGTTCTTTTGTGGTTTGTGTGCTGCTCTAGAAGAAAGGGGGATGAAGATGAAGCCTTCAGTGGGAAGTTGCGCAAGGGA GGAATGTCTCCGGAGAAAACAGTCTCAAGGGACCAGGATGCAAATAATAAAATGGTTTTCTTTGAGGGATGTAGTTATGC CTTTGATTTGGAGGATTTGTTGAGGGCTTCTGCTGAGGTACTAGGAAAAGGAACATTCGGTACTGCATACAAGGCGATAC TAGAGGACGCAACGATGGTTGTTGTGAAGAGGTTAAAGGAGGTAGCTGTTGGAAAGAAGGATTTTGAGCAGCACATGGAT GTTGTAGGAAGTCTTAAGCATGAGAATGTGGCTGAGCTGAAGGCATATTATTATTCCAAAGATGAGAAACTGATGGTTTA TGATTACTACAGTCAGGGGAGTGTCTCTTCTATGTTGCATGGTAAAAGAGGAGAGGAGCGGGTGCCTTTAAATTGGGATA CTCGTTTGAAAATAGCTCTAGGTGCTGCCAGAGGCATTGCTCGCATCCATGTTGAGAATAGTGGGAAGCTTGTGCATGGC AACATCAAGTCTTCAAACATCTTTGTCAATACTAAACAGTACGGTTGTGTATCTGACCTTGGCCTGGCAACCATGTCGAG CTCGCTTCCCCTGCCAATCTCACGAGCTGCCGGTTACCGTGCACCGGAAGTTACAGACACGAGGAAAGCAGCCCAGCCTT CAGACGTCTACAGCTTCGGTGTGGTGTTACTGGAGCTTCTGACTGGGAAATCACCTATCCACACAACTGGTGGTGATGAG ATGATCCACCTTGTGAGGTGGGTTCATTCCGTTGTGCGAGAGGAGTGGACAGCTGAAGTGTTTGATTTGGAGCTAATGAG ATATCCAAACATAGAAGAAGAGATGGTGGAAATGTTGCAAATAGCCATGTCATGTGTGGTAAGGATGCCTGATCAGAGGC CTAAAATGTCTGAAGTTGTGAAGATGATAGAAAACGTGAGGCAGAATGACACAAAGACTCAGCAATCATCTGAGAACCAA GCAACACCTAAAATATCTCAACGCGACTATGATAACTCGCCTTCTACTCCATCATCCCCCTTACCAAAAGGAAGTGAATG A
Protein sequence (LotjaGi4g1v0432600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MCASWTGVTCNEDKSRVIAIRLPGVGFHGSIPANTISRLSGLQTLSLRSNVITGQFPSDFSNLKNLSFLYLQFNKLSGPL PDFSAWKNLTVVNLSNNHFNGTIPVSISNLTQLAGLNLANNSLSGEIPGLQSSRLQLLNLSNNHLQGSVPKSLMRFPESA FFGNNISLGNSSAVSVPPLPDNEPSSTSKKGGRLKEAALLGIIVACSVLVLVAFVLLWFVCCSRRKGDEDEAFSGKLRKG GMSPEKTVSRDQDANNKMVFFEGCSYAFDLEDLLRASAEVLGKGTFGTAYKAILEDATMVVVKRLKEVAVGKKDFEQHMD VVGSLKHENVAELKAYYYSKDEKLMVYDYYSQGSVSSMLHGKRGEERVPLNWDTRLKIALGAARGIARIHVENSGKLVHG NIKSSNIFVNTKQYGCVSDLGLATMSSSLPLPISRAAGYRAPEVTDTRKAAQPSDVYSFGVVLLELLTGKSPIHTTGGDE MIHLVRWVHSVVREEWTAEVFDLELMRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMSEVVKMIENVRQNDTKTQQSSENQ ATPKISQRDYDNSPSTPSSPLPKGSE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 85 | 85 | 5.6E-23 | ||
| PANTHER | 1 | 552 | 552 | 2.8E-256 | – | |
| PANTHER | 1 | 552 | 552 | 2.8E-256 | – | |
| Phobius | 1 | 196 | 196 | - | – | |
| SUPERFAMILY | 2 | 155 | 154 | 1.02E-31 | – | |
| Pfam | 30 | 76 | 47 | 1.2E-7 | ||
| Gene3D | 86 | 177 | 92 | 1.6E-18 | ||
| Phobius | 197 | 220 | 24 | - | – | |
| TMHMM | 198 | 220 | 23 | - | – | |
| Phobius | 221 | 586 | 366 | - | – | |
| Gene3D | 242 | 349 | 108 | 1.2E-19 | – | |
| ProSiteProfiles | 275 | 546 | 272 | 30.167 | ||
| Pfam | 278 | 541 | 264 | 2.3E-33 | ||
| SUPERFAMILY | 279 | 544 | 266 | 6.37E-55 | ||
| ProSitePatterns | 281 | 312 | 32 | - | ||
| Gene3D | 351 | 572 | 222 | 2.8E-46 | – | |
| MobiDBLite | 546 | 586 | 41 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi4g1v0432600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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