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LotjaGi4g1v0443600.3

Overview

Field Value
Gene ID LotjaGi4g1v0443600
Transcript ID LotjaGi4g1v0443600.3
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Dual specificity phosphatase; TAIR: AT2G35680.1 Phosphotyrosine protein phosphatases superfamily protein; Swiss-Prot: sp|Q9ZQP1|DSP8_ARATH Putative dual specificity protein phosphatase DSP8; TrEMBL-Plants: tr|I1KPV3|I1KPV3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0443600
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:81699344..81701140) extracted from Lotus japonicus Gifu genome v1.2.

ATGAAGATCGAGGAATTGGAGGATGCAGAGTATTGTAGGGAAGAAAGAGAGAGATACGAGAGGCAGATTGTGAGCGTTGA TGCGAAGCGAGCGTTGGTCGGAGCAGGTGCCCGGATTCTGTTTTACCCGACACTTTTGTATAATGTGCTTCGTAACAAGA TGGAAGCTGAGTTCAGGTGGTGGGATCAAATTGATGAGGTTTTGCTCTCTCTGCATCTTGTTTTTCAAATTTCTCTCATG ATTAACAGTGGTTTCATTGTTTTGAAATTGCCTTATTTGGTTAGAATGATATTTGGAAATAGTATCTTTGGTAAAGTTGA ATTAATGTAGCATGTTAATGGGAAAGGGCCTTATTTGGTGAGAATGGAATTTTAGTAGAAGTGGCCATGTTACTGAATGT TATTTGATACGTGGGGTGCTGTGATTTGTTGTTTTATTAACTTTTTTGTTGTTGTTCTTTTTAGTTTTTGCTACTGGGGG CGGTTCCATTCCCGAAAGATGTTCCTCATTTGAAGAAGCTTGGTGTGGGTGGTGTGATTACTCTGAATGAGCCTTATGAA ACTTTGGTGCCATCATCATTATATCATGTAAGTGTTATTAATCTTGTTATTTTTTGGACTGGTTTGTCTTTGCATTTTGT ATGCTACTTGTATGTTTTATAGATATCCCGCTGATAAATAGCTGATTGCGGCGTGCCCTCATAGCGCTCGCGATATCCGC TATTTGACAACACTGGGAATCTCTGATTTCCAGGGAGGAGCATATTTTTGTGGGTTTGTGTGCTTAATTGTTACAGGAGT AATGAACTCCTATAATTGCGCTGTGGTTTCGTAATGTGTTTGCTGTATAATTTTTTGGTTTAAAACTATTGCTGATATCA GGTTTACTTGCTTGATTTGTTTCAGGCTCATGGGATTGATCATTTGGTCATCCCCACGAGGGATTATCTCTTTGCTCCCT CGTTTGTGGATATAAGCCGGGCTGTGCAGTTCATTCACCGTGAGTTTTTTCTTTCCTTTTTCATTCTGTTTGGGGGGTGG GGGTTTAAATGCATCTATCAATGTGGTTCTGTGATTTTTTGGTGATGAAATGCTGTTATTTATGCTTTTGTTTCTTGCCC TTGTATTTGGGTGCAGAGAACGCAACTTGCGGAAAAACCACTTATGTTCACTGTAAAGCTGGGCGAGGGAGGAGTACTAC AATTGTGCTTTGTTATCTGGTAATTTTGTAATCTCTATGAATGACAGTTGTGGCATGAGTTGAAGCTTTTCATGTGCTGA TTGATTTCAATGTTGTCTACTTGCTTTCTAGGTTCAATACAAGAACATGACACCAGCCGGTGCCCTAGAATATGTGCGGT GTCGAAGGCCTAGAGTGCTACTAGCACCATCACAGTGGAAGGTATTACCCTTCGCCCCCTATATTTTTCCCTCTGGAAGT CTTGCGACACAATACAATGCTTATTGCACTTTCTGGGTTATTATATCTCCCCTTGACATTCAGTTTTTCTTTTATCTTTG CATGTACTGTGAGCAGGCTGTTCAAGACTATAACAAGCAAATACAATGTCCTTTACCATACTCTCCATCCGGGGATGAAG TTCTTATAACCAAAGCTGATCTTGAAGGCTATCACAGCGCAAGTGATACTAGTATGGAGCTTGCCATTGTTCCTAAATTG CCAAAGACAAAGCCCATGATAGCAAGATTATCTTGCCTGTTTGCATCCTTAAAAGTATCTGGTAGCAGTGTACCAATGAC CAGGCGGTTGCCAGTTTCTGAGTCACGCGCATGCTAA
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0443600.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAAGATCGAGGAATTGGAGGATGCAGAGTATTGTAGGGAAGAAAGAGAGAGATACGAGAGGCAGATTGTGAGCGTTGA TGCGAAGCGAGCGTTGGTCGGAGCAGGTGCCCGGATTCTGTTTTACCCGACACTTTTGTATAATGTGCTTCGTAACAAGA TGGAAGCTGAGTTCAGGTGGTGGGATCAAATTGATGAGTTTTTGCTACTGGGGGCGGTTCCATTCCCGAAAGATGTTCCT CATTTGAAGAAGCTTGGTGTGGGTGGTGTGATTACTCTGAATGAGCCTTATGAAACTTTGGTGCCATCATCATTATATCA TGCTCATGGGATTGATCATTTGGTCATCCCCACGAGGGATTATCTCTTTGCTCCCTCGTTTGTGGATATAAGCCGGGCTG TGCAGTTCATTCACCAGAACGCAACTTGCGGAAAAACCACTTATGTTCACTGTAAAGCTGGGCGAGGGAGGAGTACTACA ATTGTGCTTTGTTATCTGGTTCAATACAAGAACATGACACCAGCCGGTGCCCTAGAATATGTGCGGTGTCGAAGGCCTAG AGTGCTACTAGCACCATCACAGTGGAAGGCTGTTCAAGACTATAACAAGCAAATACAATGTCCTTTACCATACTCTCCAT CCGGGGATGAAGTTCTTATAACCAAAGCTGATCTTGAAGGCTATCACAGCGCAAGTGATACTAGTATGGAGCTTGCCATT GTTCCTAAATTGCCAAAGACAAAGCCCATGATAGCAAGATTATCTTGCCTGTTTGCATCCTTAAAAGTATCTGGTAGCAG TGTACCAATGACCAGGCGGTTGCCAGTTTCTGAGTCACGCGCATGCTAA
Download CDS Sequence

Protein sequence (LotjaGi4g1v0443600.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MKIEELEDAEYCREERERYERQIVSVDAKRALVGAGARILFYPTLLYNVLRNKMEAEFRWWDQIDEFLLLGAVPFPKDVP HLKKLGVGGVITLNEPYETLVPSSLYHAHGIDHLVIPTRDYLFAPSFVDISRAVQFIHQNATCGKTTYVHCKAGRGRSTT IVLCYLVQYKNMTPAGALEYVRCRRPRVLLAPSQWKAVQDYNKQIQCPLPYSPSGDEVLITKADLEGYHSASDTSMELAI VPKLPKTKPMIARLSCLFASLKVSGSSVPMTRRLPVSESRAC
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR46274:SF8
1 275 275 2.8E-133 –
PANTHER
PTHR46274
1 275 275 2.8E-133 –
SUPERFAMILY
SSF52799
53 204 152 2.31E-37
IPR029021
CDD
cd14524
60 204 145 3.69787E-69 –
Gene3D
G3DSA:3.90.190.10
60 207 148 1.7E-41
IPR029021
ProSiteProfiles
PS50054
63 193 131 19.372
IPR020422
SMART
SM00195
63 204 142 3.2E-9
IPR020422
Pfam
PF00782
82 203 122 2.5E-18
IPR000340
ProSiteProfiles
PS50056
128 196 69 14.765
IPR000387
ProSitePatterns
PS00383
149 159 11 -
IPR016130

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004725
Molecular function Protein tyrosine phosphatase activity Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate.
Subterm of
GO:0006470
Biological process Protein dephosphorylation The process of removing one or more phosphoric residues from a protein.
Subterm of
GO:0008138
Molecular function Protein tyrosine/serine/threonine phosphatase activity Catalysis of the reactions: protein serine + H2O = protein serine + phosphate; protein threonine phosphate + H2O = protein threonine + phosphate; and protein tyrosine phosphate + H2O = protein tyrosine + phosphate.
Subterm of
GO:0016311
Biological process Dephosphorylation The process of removing one or more phosphoric (ester or anhydride) residues from a molecule.
Subterm of
GO:0016791
Molecular function Phosphatase activity Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0443600.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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