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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0453100 |
| Transcript ID | LotjaGi4g1v0453100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic; TAIR: AT3G18390.1 CRS1 / YhbY (CRM) domain-containing protein; Swiss-Prot: sp|A7XN92|CFM3_MAIZE CRM-domain containing factor CFM3, chloroplastic/mitochondrial; TrEMBL-Plants: tr|K7L4X1|K7L4X1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0453100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:82508750..82517947) extracted from Lotus japonicus Gifu genome v1.2.
AGAACCTTTGTTCCCATTTCCCAGCTGTAAGAAATTGCTGCATGGAAAAATGGAAGAAGATGAAGGAACAGTGATTGTTG TTGAAGAAGAAGAAGTGAAATGAAGATGGGTTTACTCACTTCACCGTCTTCCACTCTCTTCTTCTTCTCCTCTTCTCATT CCAAATTCAACTTATTCCACCTTCACCTTCGCATTCTCACTCTCAATTCCTTCTCTTCTCTCCGAACCAAACCTCCTTCT CTCACCAAATGGTCCTCCCTACCACCACCACCAACCACCCACGACGACGACGACTTGTTTGACCCTTTTCCTCCTCACAC CGATGACTCCAAACCCCTCAACGCCATCGACAGAGTCGTTCACCGCTTGCGGAAACTAGGCTCAAATTCCCACCACGATG AAGACGAACCACCTCCGCATGATGGGTTTTTGCGGCGAGAATGGGTTCGCCCTGATGCTCCGATGGCGGTGGACACGGTG CTGCCATGGGAGAATGATGAGGAGCTACCGCGGGTGCGTGGAGAGGATGAGGGAGGAAAAGGGTTGAGGAAGAAAACGGT TAAGGCTCCATCTTTGGCGGAATTGGCACTTGGGGTGGATGAGGTGAAGCGGTTGCGGAGAGTGGGGATGCTTGTCAAGG AGAGGGTCAGTGTCCCTAAAGCTGGTCTCACGCAGGCTGTGCTCCACAAGATTCATAGTCACTGGAGGAACTGTGAGGTG GTCAGGCTCAAGTTTCATGAGCTCCTTGCTCAGAATATGAAGTTGGCTCAACAAATTGTAGAGGTTGCTCCCTTTCCATT CCCTTTTCTCTTTGCATCATATCATGTAATTATTATGACTAGTAACTTCAGTGTGTGGTGTGCTTCATGGTTTGCTCAAT TTCTAACACAAACATACATAGATGTATTGTAATGTTGGTTATGTTATGTTATATGTAACATTTTGTGATTGTCAATCTCA TCAACTAATTTTTCCACTTAACCTGTTGGATGAAGTCAAATGGATGAATGATTTGATATTATATTTGTGATGGAAAGAGA AAATGGAAGAAGGCAATTGTTAGTGAGTGATTGATTGTTGGATAAAGCCACATAATGAATGGTTTCATATTACATTTCTA ACAGTGATACTGAACTCGTGAACTGAAATATTGTGCCTATGTGCAGCGTCGAACAAGAGGATTAATTATATGGAGCTCAG GAAGTGTTTTGTGGGTGTATCGTGGTAGGAATTATGAAGGGCCAATTCCCAGCAACCAATGGAATGGAAAGGGAGGTGAT GATCGCCTTCTTGTGACAGATGTCTCTCTGGATAGTAACGCAACTTCCTCTTTGCCGGAAAAGAGTGATCCAATTTGGTG GAATCAACAACAGCCTCAGAATATGACGCCGGAGGAAGCAGAGTTCGACAGGATGCTTGATGATTTTGGTCCTCGTTTTG TTGAATGGTGGGGTACAGGAATACTTCCTGTGGATGCTGATTTACTTCCACCTAAGGTTACTGGTTACAAAGCACCTCTT AGGCTTCTCCCCGCTGGAATGCGTTCCCGCATAACCGAGGATGAGCTGACAAAATTGCGGAAACTATCCAAAGCCCTTCC TTGTCATTTTGCCTTAGGTAAATTGATATGCTACACTTTTTTCTTATCAAATTTGCTTTCCTTTCACTGACATAAATCTT GTGTTGTAAAGGGAGAAATAGAGATCTTCAAGGGCTGGCTTGTGCTATTCTCAAGCTTTGGGAGAAAAGCTTAGTTGCAA AGATTGCTGTCAAGCGTGGTATCCAGAATACAAACAACGAACTGATGGCAGATGAGTTGAAGGTTCGTGATTTATAATTT CTTTTGGTGTTAGGTGCTTGTGCAATTGAGCTTATGTGAAGCTAAATGCATCTCATTTTGGACCAATTACTGACTGTTGA ACTAAAAATGCATAATATGCTGCGGAGCCGATAAAATATAAAAGTGTGAATCTGTGAATGATATTATTAGAATTATTAAT GCAGTTAATATATCCAAGGCCCCCTTAAGTCTTCAATACAATTATGATATATACAATACAGTTATAATTTGTTTATATTT ATCTTCGAAGGTTTCCTTTTACATTGATTTTGTCAGCTACCAAATAATTACAGATAAGAAAAATAAAAAGGAAAGAGAAA CTTGTACGTTTTGTCCAGTTGCGCTCAAATTATGTTATCACACTAATACATATATAATTTTGAAGATACCGATCTGATTA CCAATGTTGATAAAGATGAATTTTATTTACATAGTCACATGGTGCGTTTATTTGTTCCCAAGTCATACTATTCTAAGAAA AGAGAACAATGCAGTAGTTCTATTCGTTTGCTCATTTAGAAACGTGATTTTATTTTCATGGCGCAGAAATTAACAGGAGG TGCTTTGTTGCTAAGGAATAAATATTTCATTGTAATATATCGTGGGAAGGACTTTGTTCCAACCAGTGTGGCTGCTGTTT TAGCTGAAAGACAGGAATTGACGAAGCAGGTGCAAGATGCTGAGGAGAAGGTGCGTTGCAGAACTGTTGATGAGACTCTA TCAGGGGAAGATGATGCAAATGGACAAGCAGGATCATTGGCTGAGTTCTATGAGGCTCAGGCACGCTGGGGAAGGGATAT ATCTAATAAAGAACGTGAGAAAATGATGAAAGAGGCTACTGAAGCCAAGAATGTTAGGCTTATAAAAAAAGTTGAACTTA AACTAGCTTCTGTAAGTATCCGCTTGTCTTATGAAGATTTTATGCTGAAGAAAGTATTTGTTTTATTGGAAGTACTTTCC TTATATCAGAAACATTTTCTTAAGAACTTTTAAATCAATCTGCTTAATTCATATTTGCAACTCTAAATGCATGAACAGGC CCAGGCCAAAAGACTAAGAGCAGAAAAGCTATTAGCTAAAGTAGAAGCATCCCTGGTTCCTGCTGTTCCTGATGATGATC GGGAAACAATCACAGATGAAGAGCGTATAATGTTTCGCTCGGTTGGTTTAACAATGAAGGCATACTTGCAACTTGGTGGG TAATTGTTCAGCTGTATGATAGATGCTTTATTGTAATGATGCAATACTAACAGCTGTTTATGATAATCTGCAGGTACACG TGGTGTTTTTGATGGTGTAATTGAAAACATGCATCTGCATTGGAGGCACCGAGAACTTGTTAAATTAATAACGAAACAAA AGACCCTTGCCTTTGTTGAAGACACAGCTAGGTTACTGGAATACGAGAGTGGTGGAATACTAGTTGCAATAGATAGACTT CCCAAAGGATTTTCTCTTATCTACTATCGTGGAAAGAATTATAGGCGGCCCATTAGTTTGTGGCCTAGAAACCTTTTAAC GAAGGCAAAAGCATTGCAGCGATCAATAAACATGCAACGACATGAGGTTCCAATTTTTTAATATGTCAATCTCAGATCTG TCTATCTTCTTGTATCTTAATGATAATATTTGACCTTGTATTGTGCAGGCTCTGAGTCAGCATATAACAGAACTGGAGAA AAAAATAGAAAAAATGAAAAAAGAACTTGTAAGTATTGACGTATCATTAAATATATAGCTGCATTCTTTAAAAATAAATA ATTGGTTGTGTACCCGGTAAATTGCTACTTCCTAAAATCTTGAAGGGATTGGGACAAACCCCCACCCCATGTATCTTTTG TTTTGCATTTTGCTTTCTGAATTAGAGAATCTTCTATCAATCTTAACGGTTGAAACCTTTCTTCAGTCTGTGCCAAGACT GACCGACTTAGGTTATCTCCAAAATACATTGTTGTGTGAATTTTCCGCCCAAAAACTCAATGTTTCAACCATGTGAAAAT GTGTGTTTTAAAAAAATTAAAAGCAGTACTGAGCCCAATATATTATAGCTGCATATTTCCTTTAACATTTCAATTAATGT ACTCTTTGCGTGTGATGTGCCTGTTCTTGTTAGTATACATCTATAGATACTAAATTATCCATTCATGCATTGACATATTG TGTCAACCTTTTAGGCTTTCAGAGTAGTTCAAAACTTCAAATGTAGGAGTACTGGTTCTTCTATAGTTGTTCAACATTAT GGGGCAGGTGATTTGTTGAAATCATCAAATAGCTCCAAAAATAGTTTTTGCTCTCTTAGTCCTTTTAACACACTAAAAAG TAGTTGACCTGTTTTTAGAGGGAGCCACGTTAACTTGCCTATTTGAGTGTGTTGAAAAGAGTGTATAGCTTCCATTGCTC TTTAATATATTATGTACCCAATCCTCACCTCCACATTTACCTATTTTTAGCATTTAAATCTTTCTAGAATTTCAGGGTGC CCAAGTGAATGTGATCACTAATTCTTCACATACAAATAGATTATCATCAGGTTTACCTTATGTCTGTATAGCAAGTAGTC TTAATTCTTCACAACTGTGAGAACTTTCATTTAATGTACAAGGGTAGATTAGTATAGTAGCACCTACTATAAAATCCTCT TTAGTTCAATATCTTAGAGAAGATTCAGTCAATTACCAGCTTTGGGATCTTATATGGAAATGACTAATTTGTTTGTAACA TCAAATTGATTATCAACTGAAAGAGGGTAAGGATGAGAAAGATTGATTACAATGCCAATTAATCATCTGCTGGTTGTTAT TTTGCAGAGTGGGGATGAAGGCTCTAGTCCCCAAGTTATCGATGGTGATTTTGATGACAAGAAAGACAGTGATTGCGATG AGGATTATGAAATTTCAAGCTTGGAAAAATGATGGGTTTCCCTTGAAAGCAGGTTGACATATGACGGATCAGGATCCTCC GCGAAAACTCTCATAGGACTGATGAAGTCATTCGGGATTCAACGAATGATATGACCGGTTTGAGTGACTTGTAGGCTGGA TGATGAATTAGTGAACGGGTCAAAATCTGTTAAACTCGGTTTACTCTCATGAAAACTTGTGACTTTGAACTGATTGAGAT GGAGAAGGATTGGATGATGACACAATGCTTGACAGATTTTGTGACTATGATCGCCTCAGCAGAAGGATTGGATCTGGAAT GTTTAGTTGCTCTCAAAATATACGGTGGCAAGGAAGCTAGAAATCAACATACACGCCTTCTCTTTGCAGAAGGCTTTTGT ATATCCATTTTGATTTTCAATAGAATGAAATTTTCATGTGAGCAACAACATTTGTACAAATTTAGGGCCACGGGTAGTGC CAGAGGAAAGTTATCGGGCTCAAAAAGCATTTACAATAGACTTATATTTACCTCACCTCAATTGAACTATTTTGTTATAG ATTGTGGTATGGCAGGGTTCAATGAAGTTAATATATGAAGCATTATATGATCTCTTTACTCTAAAGTAAGTTGGGTAAAG TATGCATCATAACCCTTAATAGTAGTTACCTACTTAGAAAAAATCAATAAAATAACTCAATCAAAGGTTGTGATGCTTAT TTTACCTTGTAAAATGAGTGTCATGCCCCTCTTTCTCAATCCAAGAGTGAAACACTATTTTGATCACCAAAAAAACATAA CACAATCAAGCCCTTTCACCCCGAATACTAATAACTCAGTGTTCAGTTTGTTTCTTCATATCAGTGTGTAAAACTCTTTC AGCAACTTAATTGAACGAAATAAATCAAATTGTGGAGAGTATATAAATTCAGCACCGAATTATCATTATTATCACACGGA AAGGGTTACGGAGTTGGGAAAGACAGTTTTGGTTTTCCGTAAAAGTAGAACAAAGGCCTATATGATTTAATTGGTGCCAA AATCAACAATAATAATAAAGGTCTACAATTTGTTACACAAGAATTCTGTATCAACTTCCACAAAACCTCATCGTAAAAGA ATAATAACCTTATGCTAAATTGGAAGGATTAAGCATGCCTAACTTTCTTAGTTTATAATATACACATTGCATCATTGACG CAACATCTGTTGCAGCTGCAGCACTTGATTTCTTTGTTCTGGGGGCAGGTGATTTATCTGCTCGGGCGTGAGACTCATGA CCTGCTGAAGCAGTGCCTTCTCCATATCTGGTGTCAACTGTATTTACACAAAGAGGAGGATGTCAACAGACTGCAGAAAT TAATCAACAAACTAATGTTAATTCACAAGAATTACCCCAGGAGGCCGAAGAGGCTGATTAGCAGCACCCATCTGACCAGA AACTAAAGATGGTGGCCCCAGAGGACCAGAGAGCTGTGCTAAGTTTTCTGAGTGACCACCATGCATCCTAGACACTCTAT CAACTTGCATTGCATTTCCACCTTGATTGCCAAAATCATGCCCAAAAGGCATATTTCCAACCTACAAGCAAGTATGGCAT GACTTAGCATCTGAATAACCAATTACTATAAAGCACAGAGTACATGGACGATACTGCTTCTACATTCATGTTGTTTAGCT TTATTTCCATCACTCAAATCACCAAAGTCAACTTGGGTTTAGATCAAATGGACATCGTTTAACAAAAACTAGCTAAGTAC CTCAATTGTAAAATTCAAACAGAGCAATGATAATGTGTCAGGAATAAATTTTGTACAGCTGTGTCAAAACAGGATCCACA TAACTGACAGAAATAGAGTATATCTGAAAAATACACAATGTCTTTAAAGTGTAGAGAAACCTGTTAACTCTAAATTTTGT AAAAAAAATAGATTTTTAAAATTATCTGAGGAGCTCTAAGATAGAAAACATAGCTTCTTTCATCAGTCTCTCACTGTTAA TCAACGTATTTGAGAGGGACTTGAAGCCTTAGGGTAAGGAGGTGCATATCCTAGAAGATCCATAAAACCTTAATTAGGGG GATTTTACCTATTCTTTCTAATAAAATACCAAGTTCCTAACATAATGCAGGTGTCATAGAGTCTAACCATTACTATAAAA TTCACAGTACCAACACGGTTTATATCTAAACCATCAGTTGTAGCTAAGCATACCGGATAAGGTGACTGAGATGATTGCTG ACTTGGAAGTGGAGGTTGCCCTTGGGTGAACGCGGATCCAACACTAGCAGGAGGTTTTGCACCTGGCTGAAAATTTCATC AACAGACACTATTGTTACATTTTGACACACCACTAAATCTTTGATTTGAAACTGAAATATTCAGCTTACATGAAACATAG ATTGCTGAAGATTGTGAGAAGCACCAGCGTGTTGAAAACCTAAATTGGACCCCATTTGTGGGGGATACTGGGGATGGAAG GACGACGCTGAAGGTGGTCTGAGCTGTGGTGGCAGAGGTGGTTGCAAAGGCATATGTGGAAATCCAGGTGCCTGCAATGG TTGCTGCAACTGACTTGATGCAGTTTGCATTTGAGTTGGATGATGTGGCTGTGATGATGAATGAAGAGAAGGTGGAGGAA TGTTTGGAAGTTGTGAAGATTGTGGAAGAGAAGCCGGAGCTGCTTGGGGTGCTAGATGTCCTTTAGGCTGTTGTGGCATC TGCAAAGAATGTCCAGCCATGGGCGGAGATTGATGACTCATTGCAGGAGTAGCGGCATAAGAAACTGGAACTGAAGGTTG GTTTTGGTGTTTCCTCAGAGGAATTTGGGTTTGAGATACACCAGCTTGATCCTGTGCACCACCTTGCCCAGGCAATAATG GAACAGGCTGAACTTTAGGCGGTTGTGCTGACTGTACTGACTGATTGTTCTGTGGAACCATCGGCTGAACTTTTGGAACC TAGAAGAAAACATTTTTTAGCATGCAAACTTCTAGCAATGGAAGGTTGTAAAAAAATGAAGTAAAAAGCATACCACTTGA GGTGATTGCACCATTCCAAGCATAATTTGTGCCTGAGTATACAAAACAAAAAGGACAAAGTTAAACAAATAACTAATATG GCTGAATCCCCTCAGATAAATAATGAGGTTAGTTAGAAACAAAGCCATATCAACACACGCTTCTTTATTCATTAAAGGAT TCAGAATAGAACATTTTATAAAAATCTCTCCCCAAAAATAAATGACTCTATTCTCATGCACCAGCATATATTAATGTTTG AGTAAGACAACTAGAATAATGCTGAAAAATTATAGTTTTACACAAGCAAGACTATATACAGATATGAAATCTTTTTGATC CCTGTATAACTGAAAGGATGTCCAAGAAATAGATACACGTACAAGAAACATCAGGGACTCCTAAAAATCTCAATATGCAC AAAAAATAAACTGTCATTCTTAGATACCAATAATAAGGTCTGAGCAAAAAGCAAATTTTCATCACCTCAAGGGCATATAC AAGGGAAACATCATTAGCGGTTAGATTAGATATGATGCTTTGCGAGTTTTAGGGGAGGGGAAGGGGAGTGGAGGGCAAGA GAGAGAGAGGGAAGGAGGGTAAGTCTTTCACTTATTTGGGAGAAGAAAACCCACCAATTTGGGGTAACTAAAAAATATAA GTACGAGAAGGTTTTGGAGGATTTTAGAAATACCCAAAAGCCTCCCCCCTTATTAAAATCTCCCAAACAAGGGGTGGCTT CTCATAAGCCTCTCCATCTTCCCTTCTGGCCTCCAAAACCCAACTCACAAACACACTCTAAGAGTAAGGGTTGGACCACT TTCTAATCTATACACCAGCTTCTAAGAAAATTGAATGTAGCAGTTAGATAACTGTAGTTATCCATGAAATCAAATATTAC ATTTAGGGTTTCACCTTATGGCAAAATCATGCAGCATTAGAGAAAAATAGCTCCTCTAATCTAAATCCAATCACTATAAA ATATCTACACAATTGTAACAATCAAATAGGTTTACAGACAGATTCATCAATGTAACAAACTGAAACTCAGAATTTCCACA ACCCAAATTTGCAGCATCAAATTTAGCGCCAAAAGAGGAAGAACTACGCAAAGAAAGAAAAAGAAAAACCCTACAAACCT GGAAAAGCGCTTTGGTTAACATAGGGTTCTGGATGAGGATCTGCCTCGCTTGTTGTTGATTCTGTTCGATGAGATTCTGA TGAGAAACAAAGGAAACTGGTTAGCATGTGATTGGTGCGTGAGTGAATATGAAGAAGAGTGACAAAGAGGAAGTAACGAC GTGCCTTCATCTGAGACATGATATCGTAGAGCTGATTCTTTGACATTCCGGCGAGGTTCGCCGTTAACCCCTCACCGCCG CCGCCGCCGCCGCCGCTGACTTGTTTCCCGGCCATTGCAGAGACCAGAAAGATGCAAACTCAAAATTGAACGAAGGGG
CDS sequence (LotjaGi4g1v0453100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGATGGGTTTACTCACTTCACCGTCTTCCACTCTCTTCTTCTTCTCCTCTTCTCATTCCAAATTCAACTTATTCCA CCTTCACCTTCGCATTCTCACTCTCAATTCCTTCTCTTCTCTCCGAACCAAACCTCCTTCTCTCACCAAATGGTCCTCCC TACCACCACCACCAACCACCCACGACGACGACGACTTGTTTGACCCTTTTCCTCCTCACACCGATGACTCCAAACCCCTC AACGCCATCGACAGAGTCGTTCACCGCTTGCGGAAACTAGGCTCAAATTCCCACCACGATGAAGACGAACCACCTCCGCA TGATGGGTTTTTGCGGCGAGAATGGGTTCGCCCTGATGCTCCGATGGCGGTGGACACGGTGCTGCCATGGGAGAATGATG AGGAGCTACCGCGGGTGCGTGGAGAGGATGAGGGAGGAAAAGGGTTGAGGAAGAAAACGGTTAAGGCTCCATCTTTGGCG GAATTGGCACTTGGGGTGGATGAGGTGAAGCGGTTGCGGAGAGTGGGGATGCTTGTCAAGGAGAGGGTCAGTGTCCCTAA AGCTGGTCTCACGCAGGCTGTGCTCCACAAGATTCATAGTCACTGGAGGAACTGTGAGGTGGTCAGGCTCAAGTTTCATG AGCTCCTTGCTCAGAATATGAAGTTGGCTCAACAAATTGTAGAGCGTCGAACAAGAGGATTAATTATATGGAGCTCAGGA AGTGTTTTGTGGGTGTATCGTGGTAGGAATTATGAAGGGCCAATTCCCAGCAACCAATGGAATGGAAAGGGAGGTGATGA TCGCCTTCTTGTGACAGATGTCTCTCTGGATAGTAACGCAACTTCCTCTTTGCCGGAAAAGAGTGATCCAATTTGGTGGA ATCAACAACAGCCTCAGAATATGACGCCGGAGGAAGCAGAGTTCGACAGGATGCTTGATGATTTTGGTCCTCGTTTTGTT GAATGGTGGGGTACAGGAATACTTCCTGTGGATGCTGATTTACTTCCACCTAAGGTTACTGGTTACAAAGCACCTCTTAG GCTTCTCCCCGCTGGAATGCGTTCCCGCATAACCGAGGATGAGCTGACAAAATTGCGGAAACTATCCAAAGCCCTTCCTT GTCATTTTGCCTTAGGGAGAAATAGAGATCTTCAAGGGCTGGCTTGTGCTATTCTCAAGCTTTGGGAGAAAAGCTTAGTT GCAAAGATTGCTGTCAAGCGTGGTATCCAGAATACAAACAACGAACTGATGGCAGATGAGTTGAAGAAATTAACAGGAGG TGCTTTGTTGCTAAGGAATAAATATTTCATTGTAATATATCGTGGGAAGGACTTTGTTCCAACCAGTGTGGCTGCTGTTT TAGCTGAAAGACAGGAATTGACGAAGCAGGTGCAAGATGCTGAGGAGAAGGTGCGTTGCAGAACTGTTGATGAGACTCTA TCAGGGGAAGATGATGCAAATGGACAAGCAGGATCATTGGCTGAGTTCTATGAGGCTCAGGCACGCTGGGGAAGGGATAT ATCTAATAAAGAACGTGAGAAAATGATGAAAGAGGCTACTGAAGCCAAGAATGTTAGGCTTATAAAAAAAGTTGAACTTA AACTAGCTTCTGCCCAGGCCAAAAGACTAAGAGCAGAAAAGCTATTAGCTAAAGTAGAAGCATCCCTGGTTCCTGCTGTT CCTGATGATGATCGGGAAACAATCACAGATGAAGAGCGTATAATGTTTCGCTCGGTTGGTTTAACAATGAAGGCATACTT GCAACTTGGTACACGTGGTGTTTTTGATGGTGTAATTGAAAACATGCATCTGCATTGGAGGCACCGAGAACTTGTTAAAT TAATAACGAAACAAAAGACCCTTGCCTTTGTTGAAGACACAGCTAGGTTACTGGAATACGAGAGTGGTGGAATACTAGTT GCAATAGATAGACTTCCCAAAGGATTTTCTCTTATCTACTATCGTGGAAAGAATTATAGGCGGCCCATTAGTTTGTGGCC TAGAAACCTTTTAACGAAGGCAAAAGCATTGCAGCGATCAATAAACATGCAACGACATGAGGCTCTGAGTCAGCATATAA CAGAACTGGAGAAAAAAATAGAAAAAATGAAAAAAGAACTTAGTGGGGATGAAGGCTCTAGTCCCCAAGTTATCGATGGT GATTTTGATGACAAGAAAGACAGTGATTGCGATGAGGATTATGAAATTTCAAGCTTGGAAAAATGA
Protein sequence (LotjaGi4g1v0453100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKMGLLTSPSSTLFFFSSSHSKFNLFHLHLRILTLNSFSSLRTKPPSLTKWSSLPPPPTTHDDDDLFDPFPPHTDDSKPL NAIDRVVHRLRKLGSNSHHDEDEPPPHDGFLRREWVRPDAPMAVDTVLPWENDEELPRVRGEDEGGKGLRKKTVKAPSLA ELALGVDEVKRLRRVGMLVKERVSVPKAGLTQAVLHKIHSHWRNCEVVRLKFHELLAQNMKLAQQIVERRTRGLIIWSSG SVLWVYRGRNYEGPIPSNQWNGKGGDDRLLVTDVSLDSNATSSLPEKSDPIWWNQQQPQNMTPEEAEFDRMLDDFGPRFV EWWGTGILPVDADLLPPKVTGYKAPLRLLPAGMRSRITEDELTKLRKLSKALPCHFALGRNRDLQGLACAILKLWEKSLV AKIAVKRGIQNTNNELMADELKKLTGGALLLRNKYFIVIYRGKDFVPTSVAAVLAERQELTKQVQDAEEKVRCRTVDETL SGEDDANGQAGSLAEFYEAQARWGRDISNKEREKMMKEATEAKNVRLIKKVELKLASAQAKRLRAEKLLAKVEASLVPAV PDDDRETITDEERIMFRSVGLTMKAYLQLGTRGVFDGVIENMHLHWRHRELVKLITKQKTLAFVEDTARLLEYESGGILV AIDRLPKGFSLIYYRGKNYRRPISLWPRNLLTKAKALQRSINMQRHEALSQHITELEKKIEKMKKELSGDEGSSPQVIDG DFDDKKDSDCDEDYEISSLEK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 4 | 4 | - | – | |
| Phobius | 1 | 21 | 21 | - | – | |
| Phobius | 5 | 16 | 12 | - | – | |
| PANTHER | 8 | 708 | 701 | 0.0 | – | |
| PANTHER | 8 | 708 | 701 | 0.0 | – | |
| Phobius | 17 | 21 | 5 | - | – | |
| Phobius | 22 | 741 | 720 | - | – | |
| ProSiteProfiles | 162 | 258 | 97 | 17.102 | ||
| Gene3D | 162 | 260 | 99 | 1.2E-7 | ||
| SUPERFAMILY | 164 | 256 | 93 | 2.88E-18 | ||
| SMART | 164 | 247 | 84 | 2.2E-10 | ||
| Pfam | 167 | 247 | 81 | 8.9E-19 | ||
| ProSiteProfiles | 355 | 452 | 98 | 15.125 | ||
| SMART | 357 | 441 | 85 | 1.6E-11 | ||
| SUPERFAMILY | 357 | 448 | 92 | 4.19E-16 | ||
| Pfam | 358 | 441 | 84 | 4.7E-10 | ||
| Coils | 450 | 470 | 21 | - | – | |
| Coils | 528 | 555 | 28 | - | – | |
| ProSiteProfiles | 566 | 666 | 101 | 19.104 | ||
| SUPERFAMILY | 567 | 665 | 99 | 5.62E-20 | ||
| SMART | 568 | 655 | 88 | 7.8E-16 | ||
| Pfam | 569 | 655 | 87 | 1.2E-13 | ||
| Coils | 686 | 713 | 28 | - | – | |
| MobiDBLite | 704 | 741 | 38 | - | – | |
| MobiDBLite | 725 | 741 | 17 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | RNA binding | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. |
Expression pattern of LotjaGi4g1v0453100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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