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LotjaGi4g1v0463100.1

Overview

Field Value
Gene ID LotjaGi4g1v0463100
Transcript ID LotjaGi4g1v0463100.1
Lotus japonicus genome version Gifu v1.2
Description Pentatricopeptide repeat-containing protein; TAIR: AT4G02750.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750; TrEMBL-Plants: tr|K7KRF4|K7KRF4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0463100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:83318073..83326926) extracted from Lotus japonicus Gifu genome v1.2.

CAAAATACTTAGCCTGTTGCGCTCACACTAATGTTCATGTTCAAATCATGAAATGCATACCAACATGTTGGTAGTGGGAT GAAGGCATACAATAGAATGCGGTGGAGCTATTACTTACGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGCTGCAACT CTCGGTGTTTGTGCACCAACTCCAATGCCAGTAGAAGAACCAGAACCACCCACACTCCATCTCCATCACCCAACAAGCCT GACGTCAAAGACCCTGACTTACTCAAATGGAACAAGGTCATTTCTACTCACATGCGCAATGGCCACTGTGACTCTGCTCT CCGTGTCTTCAACACCATGCCTCGTCGGAGCTCCGTCTCCTACAACGCCATGATATCTGGCTACCTCAGGAACGCCAGGT TCTCCCTTGCAAGGGACCTGTTTGATAAAATGCCCCAGAGGGACTTGGTTTCCTGGAATGTCATGCTTACTGGGTATGTT AGGAACCGCAGGCTCGGTGATGCCCGCAGATTGTTTGATTCAATGCCTCAAAAGGATGTTGTTTCCTGGAATGCCATGTT GTCTGGGTATGCCCAGAACGGGTATGCTGATGAGGCAAGGGAGGTTTTTTATCAGATGCCTCATAAGAATGCCATCTCCT GGAATGGACTGCTTGCAGCTTATGTTCACAATGGGAGAATTGAGGAGGCTTGTAGGTTGTTTGACTCCAAATCAGACTGG GAATTGATTTCTTGGAATTGTTTGATGGGTGGGTTTGTGAAGAGAAAGATGTTAGGTGCTGCTAGGAAGCTTTTTGACAA AATGCATGTCAGGGATGTAGTCTCCTGGAACACTATGATTTCAGGTTATGCCCAGGATGGAGATATGTCACAAGCTAAGA ATTTGTTTGATCAATCTCCACACCAGGATGTGTTCACATGGACAGCTATGGTGTCTGGATATGTGCAGAATGGAATGTTA GATGAAGCAAGAACTTTTTTTGATCAAATGCCTCAAAAAAATGAAATTTCGTACAATGCAATGGTTGCAGGTTATGTGCA ATCCAATAAAATGGACATGGCAAGGGAATTGTTTGAAGCAATGCCTTCTCGGAATGTAAGTTCATGGAATACCATGATTA CTGGCTATGGTCAGAATGGAGACATAGCTCAAGCTAGGAAATTGTTTGATATGATGCCTCAGCGTGATTGTGTATCTTGG GCAGCTATTATTTCTGGTTATGCTCAGACTGGTCACTATGAAGAGGCTTTGAACATGTTTATAGAGATAAAACGAGACGG GGAGAGTTTAAATAGGTCAACCTTTAGTTGTGCTTTGAGCACATGTGCTGATATTGCTGCATTGGAGTTAGGGAAACAAA TTCATGGGCAGGTGGTGAAGACCGGATACGAGACCGGGTGTTTTGTGGGGAATGCACTTCTCGGGATGTATTTCAAATGT GGCAGCATTGGCGAAGCTAATGATGTGTTTGAGGGAATAGAGGAGAAAGATGTTGTCTCTTGGAACACAATGATAGCTGG TTATGCCAGGCATGGATTTGGCAAACAGGCTTTAATGGTATTTGAGTCAATGAAGACCATAGGTGTTAAACCTGATGAGA TTACTATGGTATTTTTTTTTACTTTTCACATGCATTTATATTTTTACTTAGAGCTTATCTTTAGCATGAATTTCTGCTAT TTTATCCAGTGGTGTGGAAATGTGAATCACTGTTACGAGCAATTTGTATTTTATTTAATTTATAGGTGGCCGTTTACACC TCAATCTTCTGATTAAATTGTTCGTGATCAATATGATCAAATCATTTGCCTTATTCTGCAACTTCTTTCCCGAACCCTCT CTCTCTATCTTTGTCTTTCCTTTGTCAATACCATCAAAACTGTTGTAAATAAGGAATTAATATAAGAATTATTATTAGAA GATTATATTCAGTATTAGGAGATTTATTCTCTTATTAGGAGATTGTGTACATAATTAGTTATTTCCTTATTTAGGATTAG TCTTCTTCTATATAATGTAATTACCCTTTGTATTCTGATTAAGAAGTAATAATACAATTTCTCCTACTTTCAAGTTGGTA TCAGAGCCTATCCTAGATCCATTTGTTGTGTGGAGACCTCCCATATTTGGGCCACCCGTTGTTGTTCCCACGTTCCAGTC TGTTCAATCCTGGACGTGAGGGGGTGTGTTAGAAGTCCCACATTGGCTAGAGATAAGGCCAATCAAGTGTTTATAAGGGT TGTGCAAACCTCAACTCTTGAGCTAGCTTTTGTGGTTGAGTAACAGATAATAATTCTATTAGAAATGCTAGTTGGGCAAA TGTAGACAATAAGTTCATATGGTCAATATTATCTCTCGTGTTATTGTATCATTTAATCTTATTCATATCATAAGTAGACA AATAGATGTTCCCTGCACTTCCCTTTGGTTTCCTTTGCTATTTAGTATCTTCATTTTTACCGTAACCTCTATGTTTCAAC AAGGTTTCTTCCATAGATACAATTGAGCTAATAGTTGCTTAGGAGCTATGAGCTTTCCTCTTTGTTTTTTAAATAAATCT GATAGTAATCATCACGGACTGAGAAATGGGCTAAAAAGAAGGTCTTGATGATATATTGTTTTGTCTACAATTGAGTAGCA TGCCTTTTGACCCTTTCCTACATGTATTCCGCTGATTTTTCTTTTAATCATGTTTCAGGTTGGTGTTCTGTCTGCTTGTA GTCATGCTGGCTTGATAGACAGGGGAACTGAATACTTCTATTCGATGAATAAAGATTACAGTGTGACACCGTCTTCAAAA CATTATACTTGCATGATTGATCTTCTTGGAAGAGCTGGTCGCTTGGAAGAAGCACAGGACTTAATGAGAAACATGCCTTT CGAGCCACCCGCTGCATCATGGGGGGCTCTACTAGGTGCAAGCCGGATTCATGGCAATACTGAACTGGGTGAGAAGGCTG CTGAGATGGTTTTTAAGATGGAACCTCATAACTCAGGAATGTATGTCCTTCTTTCAAATCTATATGCAGCTTCGGGCAGA TGGGCTGATGCTGGTAACATGAGATCCAGAATGAGGGATGTTGGTGTGCAAAAAGTAACTGGGTATAGTTGGGTTGAGGT GCAAAATAAGATTCATAAGTTCACAGTTGGGGATTGTTTCCATCCAGAAAAGGATAGAATATACGCCTTCTTAGAAGAGC TAGATCTGAAAATGAGACGTGAGGGGTATGTTTCTTCAACAAAATTGGTTTTGCATGATGTGGAAGAGGAAGAGAAGGAG CACATGCTCAAGTATCACAGTGAAAAATTAGCTGTGGCCTTTGGAATTCTGACTATACCAGCTGGCAGACCAATACGAGT CATAAAAAACTTGCGCGTATGTGAAGACTGTCATAATGCCATCAAGCACATATCCAAGATTGTTGGAAGGTTGATAATCT TAAGGGATTCTCATCGCTTTCACCACTTCAATGAGGGTATTTGTTCTTGTGGCGATTATTGGTAACAAAGGAGAAAATGA ACCTAAAGTATCAGCTGTACTCTCTGGATCCTAGGCCTATTTATATGTGATCGAAGAAGTGCTGATAGCAGTGAGAACCC CGTTCATTATGGAGTTGGTGTTCTCGTGAATGAGGTGATAGGGAAATATGAGTTGCTCAGATCACTTCACAATGACCACC AAGAGGTATCATCTGGTGGGAGTTTGAATGATTATATCAGATAATCATGCAAATAACTGAAGTTAAAAAGATTGCATTAC ATGCAAATAATATATTGTAGAGTAAGCTGAATTAGAAAACGGCTAGAGAAGAATGCTCTTCATAAATGTTTGGCTAATTT GTCTAAGTGCCCGCACCCAAGAAAGAAACCTGGGCGCCACAAGAACTCCTGACAAACATGGCTGCCACTCACTCACTGTA CCCCTTCAAATATACAAAGTGTTTCATCTTTTACCTATACTGTATTAGGGATTTAGCATGATAAGCCTGTTTTGTATATC CAGAAAAAAGTGATATTAGAAACTATTGATTTCACCATGTCATAAGATTTCCTGTTCTAAGTAGTTTTGTGGTTATATTT CATTCTACACCCCATTCTACCGGTCATGTGGTATAATAATGGAGAATGTAAACAATTAAAACTGAGTGAATCATCTGAAA GATGTTTCTGTGTCTAAGCTCTATGCGTCGAAGCTCGAAACTTACAAGTGACTAGAGGTGCTGCACTACCGCTGTGAACT AAGTGATTTTATAATTTCCCAAACATTTTTTTTTTTATGAAATCACTTCTGAGATGAACATTTCTAAACACACCATTTCG CACCAAACTCATCTTTTACTGTCGAAAAAGAACTCATGTTTGTTCCATAATAAATTATGAGTGGTATACATTGTGTTTCT TTACACAAATAAATACTTAATTACAGACCTTACAGTTACAGCAGTAATACAAAATGGCAATTGATGACATTGGATTCTTA AAGTTAGCATCTAACACAATCAACGTGAAGGATTTCTGTGTAGTGCTTCAAATCACCAGCTCTTTCTCTCTATGAGAAGG AACAGAGCAAACATGCAAGGAAGATCAAAATTATAATACTAAGCATGGATGATAGCATTAGCAATTTTTTCTGTCAAACC ATCCACTTCCTCCTCATTGACCTCCTCCACAATTGGCTCCTGTTAATGTAAAAGGGACAAAGTCAACATAAACAGTACTG AAATGCCTTAATTCAAGTACGAATCTGAACGTAAACACCAGAGATCATTTAAAAAAAAATGTCATTGTGCATATCTACAC AACATGAAATAAGCTAGACAGACCAAAACAATAATAAACAATAGTAGAGTTAGCTACCTCTGGTTCCTTCTTTTGTTTCA CATCTATGCACTTTGAAGCACTAATGCTGGCACTCTTCAACAGGCAGCGTGCACTATAGTTGGACTTGGAGGGTCCATTT TGAGCGTCTGAGTTTCCAGCATTTGTCTCATTAGGCCCTGGAGGACTATGAAGATTTGACCCACTTGGCCTTTCATCATC GTTGTTTTGATTACTTTCATCCTTGGAAGTAGTGACTCGCTCCCTGCAAAATTGATATGGAAATGCACAATTGCACATGA TTCACACAATACCAGAAAAAAGGTTCACAGGTTTGAACAGGTTCCCCTAGTTTGGACCAAGAAAAAACTACTGATACGGC TAGAAAATGCCTAGAAAACCAAATTTTAACCAACACTTACCTAGGTAAGGAGGCATGCTGTCTCTGCAATGGGGAGCTTC GCTCACCTTTCCCTTGGTCCTCAAGATGTGCAAACTGTCGCTTGAACCGATCAACCCCACTATGCAACAACATAAGACAG AATTACCAACTAATAACCAAAACATGTAAAGCTCGAATTTCAAAGGGCCCACATGCCATGTTAGAATTCTAGGTGGCATG CAAAACACAGAAAATTAACCATCAGTAAATTCATAAGAGTATGTTTTAACTAGTACAAGGATACGTGTCAATGAAAGTTT ATATTCTAAAGGAATTTTAAAATTGCAAAAAATCATGGCATATAATTTTTTTTTTTTTTTTTTTTTTTGAAACTATGGCA TATAATTAAACAAGCATGCCTGTGTTTTGAAAATCATCAAAATGTATAATCTCCAGCCAAGTTCTCTGCAGCTTCTCTCC AGCAAAATACTGACCATTGCTTTTCATTTTAAAAGGCTAAGATTGGTTAATGATATTTTTTTCGAAGAATTTCAGCAATT GGTATATTTTATCGGCTGTAGAAGCAGGAGAGGATCCAAGTCCGAAAATCATACGGTAAAATGTTGGATTAGTGTTTCAA TTACGAAAGGTAATGAAATGCTAAACCTTGTGACAGAAGAGACAAATGGTTTGTGCACATCAGCTTTAACATATGCATCA AAGCCTTCAATAAAAGGCCAAACATAATATAGCACATCTACCTTGGATACATGAAGCTGATTTGATCTCCACCACGAAGA TACTCCTGGAGCATCTGGGGATGATACTCCAAAATCTGCTTACTTCAAATGTATAATGATCATTACCACAGCATGGAGAA AATGATAAATTGAAGCAGGAGTAACTGAAATCTATGGCCGTACCTCTCGATAAATCAACTCTCTAACATCATCTTTGGTC AATTTCCTTCTCTCAAACTCAAATTCAAGTTTTGAAATGGGTTGAGTGGATGGTTCACGATCCACATTTGCCAAACCATT GAAATAAGGATCAGCTAGTGCCTGATATCACAAGCATAAAAGAAATAATGAAATTTACCCTTTGGTGATCTTCAATGATA TTTACCTTTCGGTAATTGTATATATGTGATAGAAGATCAACCTCTTCAGCTGTTGGACGGTCTTTAGGATCAAATGCAAG TAGGCGCTCCAGTAAACGCAGTGCCAAAGGATCTGCATTTGGAAATTTCTGGGAGAATGGAACAGGTTGTTTTTTTCTCA TGCTACTAAGATACCTTCTAGCTTTCTCATTTCGAATCTATAAAATTAAGATTAAGAATTTCCATATGAGGACATGGGAA AGGAAGTTAAGTTAAGCCGGAATGGTATTTCTTTATCGTAACAACTAATGAATCATAAGGTGTATCTCAAAAATATAATA CAGGAAGAACTTTTAAAAAGAAACACAGCTTCATTACACCATATCACAAGCTAATCAATTGATTTAAGAAAGCCAAACTA TATTTTGATAAACTAACCCTTGCAGTGGATTCAGGAGGAGGAGTTCCAAGCAAATCAGTCATGAGATCCAATTGGTGCAC CACATTTTTCCCAGGAAACAATGGCTTCCCAGAGAGCATTTCTGCAAATATGCATCCAATGCTCCAAATATCAATTCCAG GGGTATACTGCAGAAGACAAGAATTTCAAAATTATAAAAGTGTATTCAATTTCCTATATCATACACAACCAAGAACAAAA AGCTTACTTTTGAGAAAAAAGAACCACATAGTTCAGGTGCACGGTACCACCGGGTTGCAACATAATCCTTGGAAAGATAT AGGTAAACTGAGTCAGCAACAGGCTCAGAGAGATACCAATATTGCTATTAGGAATTTCCTACTGAAAATCTTAAAAGACA GAACATGATAAATGTAATAGATTGGCATGGTTGCACAATATAGTACTTACAGTCCAGAATATAGCTGATGGAGCATCATT AAATGAAACTCTAGCAAGCCCAAAATCACATATCTTTAGTTTGCAATCAGCATTAGCAAGAATATTTTTTGGCTTCAAAT CACGATGGAAAACATTTGCTGCAAGAAAAATACTATATTAGTTTAACATCACTATCTGAAAAAATCAAGGAGTAAATGCG CGTTTGGATACCATTCGAGTGTAACGGACTTTCATAACATTCTATGATAAGAGTTCCATTCGTGCTAACGTCGTGTCAAC GGATATCCAAACACAAGTGAGTGTTTGGATACCAGTTGAGTGTTAAATAAACGGAATTTCATTTCAATCTATAGCAAGAG TTCTGTTTACTAGTTATGAGATACCTGTATGTATATACTTGAGGCCCCGAAGAAGCTGATACAAGAAGAATTGGTGGTGC TCAGGAGTAAGATCATCATTTGCCTTGATAACTTGATGGAGGTCTGATTCCATCAACTCAAACACAACATAGATATCCTT GAACTCTCGCCGCGAAGGAGGAAGCATGATGTGCTTAATCTCCACAATATCAGGATGCCGGAGCAATCGCAAGAGTTTAA TCTCTCTAAGGATCCGCGTGGCATCCGACACATGCTCAAAAACGTCATGAATCTTCTTGATGGCAACCTTTTCACCAGTG CGGGTGTCAATGGCAGAACCCACAATACCATAGCTTCCTTTTCCAACGACTTCTTGGATCTGGTACTGATTTGCCTCTCC ATACTCAGTAAAAAACTCTGATTCCTGCGCGCCCTGCTTCATAATTAGAAACCATCATGTAAAATTGTTGAACAACTCCT GTTGGAAACAGAACCTGAAGACTATAACGTAATGGGATCACAGCTTTTGACACAAACACTATCAAACTAGTCTAATGCTT TAAGAAAAGTGACTGTGAATGAATCAAAATCATGGTAAACCATGTCTGAATCAGACAAACAGAAAATGATGAAAAAACAA AAGTAGCAATACCCAGTAAGCCAAACAAACAAGAGACAAAATGGTGAACCTTTTTGTGAGGATCCATGGAAGAAAATGGG AAGAGGGCGGGCGTAGGGACTCTGATGGGTTTCAAGGAAGAGATATCAAAGTGTTGGTGAATGGGGGGTAGTGTTTGGTG GTCCTGAGTGGGAATAGAAGCCAGTTGTGCCCGCAAATCTCTCAAGAAGACACGGTCATTGTTGTCATCGTCAGCAAGAG AGGAAGAAGGAGGAGCGCGTCGTTGAAACAAGCGACGAAGACCTTGTGTGATTGTTCCTCCACCACCCATCTAATCTAAT CTATTATACTACACAAACTCACTACACTCCTTCTCCTTCTCCTTCTCCTTCTTCCTCGCCCTTTGACTCTGCGCCACGAT CCCCTGTTTCCCCTGTTTCCTCTGTTTTTATTTATTTATTTATATTTATATATCTAAGCAACACGGTTTTTTTTTCTCTT TTTTCTTTCCCTCCAATCTCAATCACTACCCCGATTGATTGATGTGGAGAATGGGGGCACGGTGTAGTGTGAGGATCCGT AGTGTGATGGCAAGAGTTGAATTGGTAAGAGAAATCGCATTGGAGCTAGTGTTCTCTTGTGTTCTGCTTTATAAAGAGTT AGACAGACAAAGATCTTGTTCGTGCATGTTAATGTTAGCTTGTTACTTGATCTT
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0463100.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAAGGCATACAATAGAATGCGGTGGAGCTATTACTTACGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGCTGCAA CTCTCGGTGTTTGTGCACCAACTCCAATGCCAGTAGAAGAACCAGAACCACCCACACTCCATCTCCATCACCCAACAAGC CTGACGTCAAAGACCCTGACTTACTCAAATGGAACAAGGTCATTTCTACTCACATGCGCAATGGCCACTGTGACTCTGCT CTCCGTGTCTTCAACACCATGCCTCGTCGGAGCTCCGTCTCCTACAACGCCATGATATCTGGCTACCTCAGGAACGCCAG GTTCTCCCTTGCAAGGGACCTGTTTGATAAAATGCCCCAGAGGGACTTGGTTTCCTGGAATGTCATGCTTACTGGGTATG TTAGGAACCGCAGGCTCGGTGATGCCCGCAGATTGTTTGATTCAATGCCTCAAAAGGATGTTGTTTCCTGGAATGCCATG TTGTCTGGGTATGCCCAGAACGGGTATGCTGATGAGGCAAGGGAGGTTTTTTATCAGATGCCTCATAAGAATGCCATCTC CTGGAATGGACTGCTTGCAGCTTATGTTCACAATGGGAGAATTGAGGAGGCTTGTAGGTTGTTTGACTCCAAATCAGACT GGGAATTGATTTCTTGGAATTGTTTGATGGGTGGGTTTGTGAAGAGAAAGATGTTAGGTGCTGCTAGGAAGCTTTTTGAC AAAATGCATGTCAGGGATGTAGTCTCCTGGAACACTATGATTTCAGGTTATGCCCAGGATGGAGATATGTCACAAGCTAA GAATTTGTTTGATCAATCTCCACACCAGGATGTGTTCACATGGACAGCTATGGTGTCTGGATATGTGCAGAATGGAATGT TAGATGAAGCAAGAACTTTTTTTGATCAAATGCCTCAAAAAAATGAAATTTCGTACAATGCAATGGTTGCAGGTTATGTG CAATCCAATAAAATGGACATGGCAAGGGAATTGTTTGAAGCAATGCCTTCTCGGAATGTAAGTTCATGGAATACCATGAT TACTGGCTATGGTCAGAATGGAGACATAGCTCAAGCTAGGAAATTGTTTGATATGATGCCTCAGCGTGATTGTGTATCTT GGGCAGCTATTATTTCTGGTTATGCTCAGACTGGTCACTATGAAGAGGCTTTGAACATGTTTATAGAGATAAAACGAGAC GGGGAGAGTTTAAATAGGTCAACCTTTAGTTGTGCTTTGAGCACATGTGCTGATATTGCTGCATTGGAGTTAGGGAAACA AATTCATGGGCAGGTGGTGAAGACCGGATACGAGACCGGGTGTTTTGTGGGGAATGCACTTCTCGGGATGTATTTCAAAT GTGGCAGCATTGGCGAAGCTAATGATGTGTTTGAGGGAATAGAGGAGAAAGATGTTGTCTCTTGGAACACAATGATAGCT GGTTATGCCAGGCATGGATTTGGCAAACAGGCTTTAATGGTATTTGAGTCAATGAAGACCATAGGTGTTAAACCTGATGA GATTACTATGGTTGGTGTTCTGTCTGCTTGTAGTCATGCTGGCTTGATAGACAGGGGAACTGAATACTTCTATTCGATGA ATAAAGATTACAGTGTGACACCGTCTTCAAAACATTATACTTGCATGATTGATCTTCTTGGAAGAGCTGGTCGCTTGGAA GAAGCACAGGACTTAATGAGAAACATGCCTTTCGAGCCACCCGCTGCATCATGGGGGGCTCTACTAGGTGCAAGCCGGAT TCATGGCAATACTGAACTGGGTGAGAAGGCTGCTGAGATGGTTTTTAAGATGGAACCTCATAACTCAGGAATGTATGTCC TTCTTTCAAATCTATATGCAGCTTCGGGCAGATGGGCTGATGCTGGTAACATGAGATCCAGAATGAGGGATGTTGGTGTG CAAAAAGTAACTGGGTATAGTTGGGTTGAGGTGCAAAATAAGATTCATAAGTTCACAGTTGGGGATTGTTTCCATCCAGA AAAGGATAGAATATACGCCTTCTTAGAAGAGCTAGATCTGAAAATGAGACGTGAGGGGTATGTTTCTTCAACAAAATTGG TTTTGCATGATGTGGAAGAGGAAGAGAAGGAGCACATGCTCAAGTATCACAGTGAAAAATTAGCTGTGGCCTTTGGAATT CTGACTATACCAGCTGGCAGACCAATACGAGTCATAAAAAACTTGCGCGTATGTGAAGACTGTCATAATGCCATCAAGCA CATATCCAAGATTGTTGGAAGGTTGATAATCTTAAGGGATTCTCATCGCTTTCACCACTTCAATGAGGGTATTTGTTCTT GTGGCGATTATTGGTAA
Download CDS Sequence

Protein sequence (LotjaGi4g1v0463100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MKAYNRMRWSYYLRSSSSSSSSSSSCNSRCLCTNSNASRRTRTTHTPSPSPNKPDVKDPDLLKWNKVISTHMRNGHCDSA LRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAM LSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFD KMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYV QSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRD GESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIA GYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLE EAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGV QKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGI LTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SignalP_GRAM_POSITIVE
SignalP-TM
1 24 24 - –
ProSiteProfiles
PS51257
1 26 26 6.0 –
MobiDBLite
mobidb-lite
38 59 22 - –
Gene3D
G3DSA:1.25.40.10
50 152 103 3.1E-24
IPR011990
ProSiteProfiles
PS51375
60 90 31 8.265
IPR002885
Pfam
PF01535
64 90 27 0.07
IPR002885
ProSiteProfiles
PS51375
91 125 35 11.137
IPR002885
TIGRFAM
TIGR00756
93 123 31 7.8E-7
IPR002885
Pfam
PF01535
93 122 30 4.3E-6
IPR002885
TIGRFAM
TIGR00756
124 154 31 1.8E-6
IPR002885
Pfam
PF01535
124 153 30 5.0E-6
IPR002885
ProSiteProfiles
PS51375
126 152 27 7.081
IPR002885
PANTHER
PTHR24015
128 211 84 1.1E-128 –
Gene3D
G3DSA:1.25.40.10
153 215 63 1.8E-16
IPR011990
ProSiteProfiles
PS51375
153 187 35 11.477
IPR002885
TIGRFAM
TIGR00756
155 181 27 4.0E-6
IPR002885
Pfam
PF01535
155 183 29 7.6E-8
IPR002885
SUPERFAMILY
SSF81901
179 366 188 2.88E-6 –
TIGRFAM
TIGR00756
186 209 24 1.7E-4
IPR002885
Pfam
PF01535
186 209 24 4.9E-4
IPR002885
ProSiteProfiles
PS51375
188 214 27 5.371
IPR002885
ProSiteProfiles
PS51375
215 245 31 8.199
IPR002885
Gene3D
G3DSA:1.25.40.10
216 306 91 2.6E-21
IPR011990
TIGRFAM
TIGR00756
217 248 32 3.4E-6
IPR002885
PANTHER
PTHR24015
220 331 112 1.1E-128 –
Pfam
PF12854
245 272 28 1.1E-6
IPR002885
ProSiteProfiles
PS51375
246 276 31 9.624
IPR002885
TIGRFAM
TIGR00756
248 272 25 6.3E-5
IPR002885
ProSiteProfiles
PS51375
277 311 35 11.575
IPR002885
Pfam
PF01535
279 308 30 8.0E-8
IPR002885
TIGRFAM
TIGR00756
279 307 29 3.3E-7
IPR002885
Gene3D
G3DSA:1.25.40.10
307 418 112 7.0E-27
IPR011990
TIGRFAM
TIGR00756
310 340 31 1.5E-5
IPR002885
Pfam
PF01535
310 340 31 2.2E-6
IPR002885
ProSiteProfiles
PS51375
312 338 27 6.928
IPR002885
PANTHER
PTHR24015
313 366 54 1.1E-128 –
ProSiteProfiles
PS51375
339 373 35 11.772
IPR002885
TIGRFAM
TIGR00756
342 372 31 1.1E-7
IPR002885
Pfam
PF13041
370 417 48 2.3E-8
IPR002885
TIGRFAM
TIGR00756
372 405 34 4.7E-5
IPR002885
PANTHER
PTHR24015
374 635 262 1.1E-128 –
ProSiteProfiles
PS51375
374 404 31 7.377
IPR002885
ProSiteProfiles
PS51375
405 439 35 6.182
IPR002885
Gene3D
G3DSA:1.25.40.10
419 533 115 3.2E-25
IPR011990
ProSiteProfiles
PS51375
440 470 31 6.226
IPR002885
Pfam
PF13041
470 518 49 6.0E-12
IPR002885
ProSiteProfiles
PS51375
471 505 35 12.649
IPR002885
TIGRFAM
TIGR00756
473 507 35 1.1E-6
IPR002885
ProSiteProfiles
PS51375
506 536 31 6.456
IPR002885
Gene3D
G3DSA:1.25.40.10
534 662 129 2.4E-13
IPR011990
ProSiteProfiles
PS51375
542 572 31 8.429
IPR002885
Pfam
PF01535
545 569 25 4.5E-4
IPR002885
ProSiteProfiles
PS51375
608 642 35 7.728
IPR002885
Pfam
PF14432
645 767 123 5.2E-41
IPR032867

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of
GO:0008270
Molecular function Zinc ion binding Interacting selectively and non-covalently with zinc (Zn) ions.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0463100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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