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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0464300 |
| Transcript ID | LotjaGi4g1v0464300.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glutamyl-tRNA(Gln) amidotransferase subunit A; TAIR: AT3G17970.1 translocon at the outer membrane of chloroplasts 64-III; Swiss-Prot: sp|Q9MUK5|TOC64_PEA Translocon at the outer membrane of chloroplasts 64; TrEMBL-Plants: tr|G7LE58|G7LE58_MEDTR Translocon at the outer membrane ofs-like protein; Found in the gene: LotjaGi4g1v0464300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:83439251..83446423) extracted from Lotus japonicus Gifu genome v1.2.
GATGGAGCAGTAGAGTAGATAGATAGAGATAAAAGAGGAAGTTGAGGCGGCGGGAGAGGAGAGGAGAGGAGACTGCTAGT AACAAACAGTATCCTCCCTCCATACTCTTCCTGCTTTGTGGTTTTAGGTTAAATTAAATATGGCGTCTCAGTCAGGGAAC TTATGGGTCTTGTTGGGGCTGGGCTTGGCCGGAATCTTCGTCCTCACCAGGAAGCTCAAGGAACACAAGGAGGATTTAGG GGCTTTCATTCAAAAGCTTCACCTGCTTCCTCCTCCTCAGCCCGCTCCCCCTAAAGCTCCTCACCCTCTCACCGCTCTCA CCTTCGCTTTCTCCGACCTATTTGACATTCACGGACATGTATCCACTTTTGGCCATCCCGACTGGGCAACCTCGCACCAA CCTGCTTCTTCTACTTCTCCTGCAATCTCTGCTCTTGTTCAAGCTGGCGCTACCGCTCTCGGAACCACTCTTGTTGACCC CTTTGCATACGGTATTACTGGCCAAAACAAGCATTATGGAACGCCCACCAACCCTGCTGTGCCTTCTCGACTGCCCGGTG GATCCTCTAGTGGTGCTGCTGTCGCTGTTGCTGCTAATTTTGTTCATTTCTCATTGGGTATTGATACTACTGGAGGGGTC AGACTACCTGCTGCATTTTGTGCCATTTTAGGATTTCGACCTTCATATGCTGCTGTATCTCATGTGGGAATCATACCTGT TTCAACAAGTTTGGACACTGTAGGTTGGTTTGCCAAGGATCCTAATATATTGCGTCGAGTTGGCCATATACTTCTACAAG CACCACTTGCAATTCAATGCGGTCCTCGGCAAATAATTATAGCGGATGATTGTTTTCAACATCAAATTGTTCCTCTTGAC AGGAGTTCTCAAGTGCTGATCAAAGCCACGGAGAAGCTTTTTGGAAGTATGTTTGTTTCTCTATGTTCTTCTTTCCAGTT TAATATAAGCCTGCTCATTTAGTCATCCTTAACTGCTCTGCTCTGTCCTCTTTGTGCTTGTGTGTGTGTGTTCTTTTTTT CCAACTAATTTTGTGCTTTGTTCTTGAAATTATGCTCCATTGTCCATTAGTTTTTGCTTAACATTAATTGTCTTCAGGGC AAGTGTTGAAGCATATAAATCTGGAGGACTACATAAGTTCTAAAGTTCCTAGCTTGGAGACCTGCTCGAGCCAGAAAACA AATGGTGAAGTGAAAACATCTTCATTAAAATTACTTGCCAACATTATGCAATTCATTCAAAGGTTAGTCAGATTCCTTGT GAGTTGTGATAGGGACTAATAATTTGTGATTTTATGGTAAACTCTGGATGGACAAAAATGAGATGCTTCTCAATCTGCTG TTTGGTACTCCAGAATTGTTTTACAAGAGGGACTTTTGCCATTAATGTTTGATGTGATCACAGCTAATCAAGTCATAATT ATCTTTTCAATTAATATTTCTCAATTTGTTACATATGGCTATTTGAGGGAGTACTATTTTTTCAATCTACTTGTGCAGAC ATGAATTTGGACTTAAGCATGCTGAGTGGATGGACATAGTAAAACCTGATCTCCATCCAGCTGTTACAGCTCAGTTGCAT GGAAAATTAGAGATATCCGATGCAGAGATTGAAAATTCTAAATCTGTTAGAAGTGAGATGCGTGCTGCTATAAATTCGCT TTTGAAGGTAATAATTTTACATCATTTTATGTTGATTTAAAGGTTATACTAATGGTGAGAGGTTGTTGGATTGAATTGGC ATAATCGTCTCTTGGTGAACTAGACCTAGAAAATATGCATTTTGTATGATAGGAATAGGGAGAAGAAAATGATACAATTA GTACTGGACAATAATTATGACCAAAACTTCTTTTAATTAGTCCTACTGATGCTTTTCATAACATTCTAACATCGGTTGGG AGGGAACATGTAAGTTCTGTGACATATTTTTAGGGGAAAGATATATTTGACATTGACAAAGGAAATGTGTCTTATACTTT TTTGTTATGTTCAAAAGTATTTTCTCTGCAAGTTGTGATCATCATATATTGATATGGTTTTATCAATTTGGAATATCATT ATCTCTTCACGAAGACTCTGATTATGTAAAATATATATTTTCTATAAAGTTGTGTTAACGTATGTAGAAATCAGCTTATC TTGAGTTTTTTAGAATTTCTCGTTTCTGAGCGTCTTAACTCTGAAATGCATCAGGTAGATTCTTCCCTAAAAAGGAGGAA AGTGGATATTTTTTAAAACATTGTTTTTTTGTGGTACAATTTTCATAACATTGATGACTGTATATGTATTCTAATTTTTA TTAGAATTTGCTTTTCCATCTATTTATGCGTGTGTATGAGTATATTCTGATAAAGAGAAAATAACTTTTCATGAGTTTAA TACATTTTGATGTTTTTAAGGATGAAAGAATTTTGGTGATCCCTACTGTAGCTGATCCTCCTCCAAAATTAGGTGGGAAA GAGATTCTATCACAGGATTATCAGAGCCATATGTTTAGTGCGCTAAGTATTGCTAGCATATCGGGTTGCTGTCAGGTAAA GTTCTCTCCCTCATGAAACTAGCATAATGTTACCTGATGCTTCTTATAACTACGTTTATCTATATACTATGGAGTTGTTT TGACAGAATTGTTTCCTCAATCATATTGCATTTTTCTGTTCTGACGTCTACCAGTGAAAGGCTTGGCAGTTGTGGTTATG CATCTTTAATCCATGCCCTCCTGGTTTTTCCTTTCAGGTCACAATCCCACTGGGATTCTACGACAAGTATCCTGTTTCAG TGTCCTTATTAGCTCGGCATGGTGGTGATCGCTTTTTACTTGACACACTACAGACCATGTACACAACTCTCCAAGAGCAG GCTGATATTGCTTCCAAAAGTAAACCATCAAGCAATGTTGTCAGTAAGGAACAATCTGCTGAAATTGCCAAAGAGAAGGT ATTGCTGTCATGATGTCAGATAAATTCAGTACATACCTGCTTTTGATTGTAATTGTGCAAAATAATTGGCATGGTTTCAC ATCTAAAATTCTAAATCACACTTGACATAAGGAGATATCAAGTTTGTTTTTCCTATCTTCATTGTGGATGTGTTCAATTA TTAAATATACATTCATTTGGCATAAGCAGATATCATCTCCTGTTTTGCCCCTCTCATGCATGGAGACAGTCACATTCCAT GTAACTATAGAATTCTAATCATGGTCCTTGTAGCTTTTTCTTGTAGGACAAACCTTGTATCTGGGTTAACATAGTGTATT ATATCTCGATGATTGTAGCGCAGCGGTGCTGTTCAGTGTAGCAGCTGTTGTGGCCGCTATAGTGGAGGAAAAAGTGGCCA TAGGGTTCTATTTGGCGGAACTGATAAATTTCAAAGAAGTATCCTTAAAAAGTTAATGTTAGGGCATTTGTGTGGGTGTA TTTAGGGTTTTTGCTTCAGAAACATATTGAAAAGGGTCTAGTTTGAGGAGGAAGTGATATAGAGTAGTGAAAGTGATCAA CTGGAAGACTTGGAGTTGATCTAGAAGAGGATTATAGATGATTCCTGTTTATGGAACTTCTATTTAAATTTTGATGTTTT TAGGCAGTTTAGTTTAAGCATTAGAGCCTAAAACTACTAGGTTACCTTGACTTTTTTTGGAACTTGCATGTCTTGTTTAA TACACACATGACTATTTTTTGTTAATTATGAGTGCCATGAAGTTTAGGTTTTTTTATCATTTTTGATCATTTATATATGT GTACAGTTAATATATATATATATATATATATATATATATATATATATATATATATATAAACTGTATAAAAAATTCAGCAT AGCGACCATCCCGCTATGCGCTGTACGCGCCACTATCCGGGATTGATATCACTGCCACAACTACCATAAAACCTCTACAG CATTATATTTTTGCAAGTTTTCTGCATTTCTTGTAGCTGCATCTGATGATTTTGATTATTAACTCTCACTTTTGTGCGTG ATCTTCTTAATCCTTCGTTTGGTTTATCACTTAATGATTCAGGGAAATCAAGCCTACAAAGATAAGCAGTGGCAGAAAGC CATTGGATTTTATACAGAAGCTATCAAACTCTGTGGAGATAATGCGACATACTACAATAACAGGGCTCAAGCATATCTAG AACTTGGAAGGTAGTATGTTATTCCTTTGCTAGTTTACTAGTCAAGTGTGTCTTCCAAACATATTGATTTGTTCTTTCTG TTCATCTAGTTACCTCCAAGCTGAGGCAGATTCTACAAAAGCTATTAACATTGACAAGAAGGTGACTTCACTCTTCCGAG AACTTTTTCCTTGAAAGTTTATAGTACAGTGACTGATTGCTATGTCATTATAGACTATGATAATAGTTTATGGTTATTCA CGGGAAAATGCATCAAAAAGTCATACTATTTTTTTATCTGTATACTTCATATCAAGTAACATCGAACTTGTTCAGAATAC TTGTTGTATTTTTACTTAAACGAGATATTGTTATCTTTGTTTAATCCAGAATGTGAAGGCGTATTTTCGTAGAGGTACAG CTAGAGAGATGCTAGGCTACTATAAGGATGCATTTGATGGTATGATCTTTCATTCTTCTCACGTTTGTGCTTCTATTTTT ATTTAGAAAGCTTAAGAGGGTGTTAAGTGAAAGAACAACGTGTAGTGTTATTTGTAAAAGAGAAAGCAATCAGCCTTACA TTTCCTTTTTGGTAAAATCATGTGCGGTTTATCTTTTCCTAAAATTCTCCAAAATAGTAGTATAATTTGAAGTGACTCGG TCACCCATCGGGTTCCGTATTATAATTGTCTCTTATGCCTTATAGGTGAAGGCGTTTAATTTTGGCCCATTGCCCTTACA TAGCTGATTTCTGGTTTATGTGCTTTAATTTTGCTGTTAGGAATTAGGATATTTAGTGATGAGTAGAATGGGATGGAACA AAAATTAACTTTCCATGGTTCAGATATTTCATAATGTAATGGAATGTGTGGAATTGAAAAAATCGGCTGCATCCCATACT CCAGATTGGGGGAGGGGGGTAGACTCTTTGGATGCAATGAAATGGATTCCATTCAATAGTAATAACTCATTTCAATTCCA CTCCACTCCATTTCATCTATTTCTTTTTCTATTTCAAGTATTTCTAATTTTAATTTGATATGGAGATTCGAAGATTATGT TTTGCTGGGTATTTGACTGTCCCAAGGGCTTATCTTTGTTCTCGCTTCCTTATGTCTATTTTAGGATTTTCCCTTGGCTA ATAAAAATTTTGCTTTGCAGATTTTACATATGCTCTGGTACTTGAGCCAACCAACAAAAGGGCAGCTACTGCTGCTGAAA GGTTGAGGAAGCTATTCCAGTAGGTAGTAGTAGGTACATAACTGTGAGCACAAGATTTGAGCTGAACACCCCAGAATCGC GGCGCTGGTGGCCAATTTATGCCCTGAGATGATTGATGAGTTTCTAGTTGCAATTATCGTAGTGGAGTTATGACGTTTGG TTTCTGCAAATGATAATGATTCTTTTGTCCATCGTGGCTACGTAATCAGTTTTAGACATAGAAAGCATGTATTGCATAAG CTTTTCAGGTTCCAGGACAGTAGCATGTTATTGCGAGAATGAGTCCCAATTTTGCTCGAGGTAAATATATTAGGATCGTG ATGTGTCAAGGGAGGCGTATACTCAGTATTCAACTGTGCATTTCTCATAAAAGTGGACTAGATTGTACTTCACAGGTTTA AATCCTTTTTTTTCAGTCGAAGTGACATCTTATGGTCAATCAAAAATTGAAGCATTTATGCATTGATTCTCAAAAAAATT CACCAATTCAATCTCTTAAGTAGTAGATAGTTATCACCAATTATTTTTATTGTCATCACTCTAGTTCTCTATATTGACAA ACTTAGGTGATCATTGCGTATCTTTTAAAGATGAATTTAGTGAAACATAGTAATGTTATGATCACTAATGGATTATTTTG CTGACAATTTACAATAATATTGTGATGATTACAATAATATTGTGATGATGCCTTGTTCTTTGTGCAACTAAGTTATATTC AAGGTTCAACCTTTCTCAAATCTTCATTGTTATAACTAGTCCGTTAAAGATTTTGCATGATATACAGTACCTTGTGAATC AAAATATGTTAGGAACATTCCAACAGATAAAATAAGTACCCAAGCATTGTTTCTAAATAAAAAAACTTGTTTCACCACCA ACGGCTGACGAATATTTGTAACCAGTAAATACTCGGAAGTGTAACAGCAATTTTTGGGTATGTATGCTTCAGTGAGCATG CAGAATGGATGAAAAACAAGCACCAGCCAAGCTGCTATCCCCATGTTCATGCAATCAGCAAGCAGAATGTCTCGGATTTT GATTGAGAATTGAATATCAAGTATGTACTTTTCAACTTCATGAAACTAAACTCAATTGAAATCTCAATTTTAGCATACAT CTCAAATAAATTCCACCAAAACTAAATTCTAAATTTGATTCCATACACCAAAAAGACCTGAATGTATTCTATGAATATTT ACAGAAAACGTGCACCATTGTAATTAGCTAAAATGCCCCACTAAGATACGTGTAAACTGGGTATATCAGCATCATCTCAT ACTTTGTTCTTTTCTTCTTGAACGAAATCTTATGGTTTGCTCTGACAAAAAGAACTTAAACCTTAGTCAAATGCTAAAAG CTCATCAAGCTGTTCCTCTGTCCAGTAAGGGATTGAACCTTTTGGATTTGCAATCTCCTTCTGACTTCCCAAGTGATTCT TTATTACAGATTGTTGACTATCAGATGTATGAACCGAGCTTGTTGATGAAATACCACCTGGTGCAACCCCCGCAAGATTG TTTCCTTCACACAATTTAGGAGGGTTGGATTGGTCTTCCATCTCACCTTCAAGTTCGCTACCATGGGTCACTTCGACAGG TCTAGAAGAGTCCTCACTCAATGGTAAGTTCTCTCTATCCATAGCAGTTCTTTTGTTTCGATCAGTACCATTGTCAGAGT CAGAACTAGTTAACACCAAAATTTCATCCCATTGTTTACCAACATCTGCTTCTTGTCTAAAACTTGATTTAGTCATGGTT CCTCCAGTCCTTTCCTGTGGCAGAGAGAATGTACTGCCTGACTTTTCATGTCT
CDS sequence (LotjaGi4g1v0464300.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGTCTCAGTCAGGGAACTTATGGGTCTTGTTGGGGCTGGGCTTGGCCGGAATCTTCGTCCTCACCAGGAAGCTCAA GGAACACAAGGAGGATTTAGGGGCTTTCATTCAAAAGCTTCACCTGCTTCCTCCTCCTCAGCCCGCTCCCCCTAAAGCTC CTCACCCTCTCACCGCTCTCACCTTCGCTTTCTCCGACCTATTTGACATTCACGGACATGTATCCACTTTTGGCCATCCC GACTGGGCAACCTCGCACCAACCTGCTTCTTCTACTTCTCCTGCAATCTCTGCTCTTGTTCAAGCTGGCGCTACCGCTCT CGGAACCACTCTTGTTGACCCCTTTGCATACGGTATTACTGGCCAAAACAAGCATTATGGAACGCCCACCAACCCTGCTG TGCCTTCTCGACTGCCCGGTGGATCCTCTAGTGGTGCTGCTGTCGCTGTTGCTGCTAATTTTGTTCATTTCTCATTGGGT ATTGATACTACTGGAGGGGTCAGACTACCTGCTGCATTTTGTGCCATTTTAGGATTTCGACCTTCATATGCTGCTGTATC TCATGTGGGAATCATACCTGTTTCAACAAGTTTGGACACTGTAGGTTGGTTTGCCAAGGATCCTAATATATTGCGTCGAG TTGGCCATATACTTCTACAAGCACCACTTGCAATTCAATGCGGTCCTCGGCAAATAATTATAGCGGATGATTGTTTTCAA CATCAAATTGTTCCTCTTGACAGGAGTTCTCAAGTGCTGATCAAAGCCACGGAGAAGCTTTTTGGAAGGCAAGTGTTGAA GCATATAAATCTGGAGGACTACATAAGTTCTAAAGTTCCTAGCTTGGAGACCTGCTCGAGCCAGAAAACAAATGGTGAAG TGAAAACATCTTCATTAAAATTACTTGCCAACATTATGCAATTCATTCAAAGACATGAATTTGGACTTAAGCATGCTGAG TGGATGGACATAGTAAAACCTGATCTCCATCCAGCTGTTACAGCTCAGTTGCATGGAAAATTAGAGATATCCGATGCAGA GATTGAAAATTCTAAATCTGTTAGAAGTGAGATGCGTGCTGCTATAAATTCGCTTTTGAAGGATGAAAGAATTTTGGTGA TCCCTACTGTAGCTGATCCTCCTCCAAAATTAGGTGGGAAAGAGATTCTATCACAGGATTATCAGAGCCATATGTTTAGT GCGCTAAGTATTGCTAGCATATCGGGTTGCTGTCAGGTCACAATCCCACTGGGATTCTACGACAAGTATCCTGTTTCAGT GTCCTTATTAGCTCGGCATGGTGGTGATCGCTTTTTACTTGACACACTACAGACCATGTACACAACTCTCCAAGAGCAGG CTGATATTGCTTCCAAAAGTAAACCATCAAGCAATGTTGTCAGTAAGGAACAATCTGCTGAAATTGCCAAAGAGAAGGGA AATCAAGCCTACAAAGATAAGCAGTGGCAGAAAGCCATTGGATTTTATACAGAAGCTATCAAACTCTGTGGAGATAATGC GACATACTACAATAACAGGGCTCAAGCATATCTAGAACTTGGAAGTTACCTCCAAGCTGAGGCAGATTCTACAAAAGCTA TTAACATTGACAAGAAGAATGTGAAGGCGTATTTTCGTAGAGGTACAGCTAGAGAGATGCTAGGCTACTATAAGGATGCA TTTGATGATTTTACATATGCTCTGGTACTTGAGCCAACCAACAAAAGGGCAGCTACTGCTGCTGAAAGGTTGAGGAAGCT ATTCCAGTAG
Protein sequence (LotjaGi4g1v0464300.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASQSGNLWVLLGLGLAGIFVLTRKLKEHKEDLGAFIQKLHLLPPPQPAPPKAPHPLTALTFAFSDLFDIHGHVSTFGHP DWATSHQPASSTSPAISALVQAGATALGTTLVDPFAYGITGQNKHYGTPTNPAVPSRLPGGSSSGAAVAVAANFVHFSLG IDTTGGVRLPAAFCAILGFRPSYAAVSHVGIIPVSTSLDTVGWFAKDPNILRRVGHILLQAPLAIQCGPRQIIIADDCFQ HQIVPLDRSSQVLIKATEKLFGRQVLKHINLEDYISSKVPSLETCSSQKTNGEVKTSSLKLLANIMQFIQRHEFGLKHAE WMDIVKPDLHPAVTAQLHGKLEISDAEIENSKSVRSEMRAAINSLLKDERILVIPTVADPPPKLGGKEILSQDYQSHMFS ALSIASISGCCQVTIPLGFYDKYPVSVSLLARHGGDRFLLDTLQTMYTTLQEQADIASKSKPSSNVVSKEQSAEIAKEKG NQAYKDKQWQKAIGFYTEAIKLCGDNATYYNNRAQAYLELGSYLQAEADSTKAINIDKKNVKAYFRRGTAREMLGYYKDA FDDFTYALVLEPTNKRAATAAERLRKLFQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | - | – | |
| PANTHER | 4 | 548 | 545 | 1.2E-236 | – | |
| Phobius | 6 | 23 | 18 | - | – | |
| TMHMM | 7 | 24 | 18 | - | – | |
| Phobius | 24 | 589 | 566 | - | – | |
| Gene3D | 47 | 449 | 403 | 4.8E-72 | ||
| Pfam | 51 | 207 | 157 | 1.9E-40 | ||
| SUPERFAMILY | 54 | 442 | 389 | 1.57E-72 | ||
| Pfam | 344 | 440 | 97 | 7.9E-6 | ||
| Gene3D | 463 | 589 | 127 | 7.9E-40 | ||
| SUPERFAMILY | 471 | 579 | 109 | 3.8E-29 | ||
| ProSiteProfiles | 473 | 506 | 34 | 6.844 | ||
| ProSiteProfiles | 473 | 574 | 102 | 22.162 | ||
| SMART | 473 | 506 | 34 | 0.05 | ||
| ProSiteProfiles | 507 | 540 | 34 | 8.201 | ||
| SMART | 507 | 540 | 34 | 0.013 | ||
| SMART | 541 | 574 | 34 | 0.016 | ||
| ProSiteProfiles | 541 | 574 | 34 | 10.296 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi4g1v0464300.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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