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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0465200 |
| Transcript ID | LotjaGi4g1v0465200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Thioredoxin; TAIR: AT3G17880.2 tetraticopeptide domain-containing thioredoxin; Swiss-Prot: sp|Q8VWG7|TDX_ARATH TPR repeat-containing thioredoxin TDX; TrEMBL-Plants: tr|I1KQM0|I1KQM0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0465200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:83530853..83538115) extracted from Lotus japonicus Gifu genome v1.2.
GAGGCATAAAATTGACCAATATTTAAAACAAAACTCACAAAAATGAGTTACAATTTGAAGAGAGTAATAAATACATCGTC AATTCATCCTCTCCAAAACAATCTCAAATTCAAACTCAAAATTTCAGATCATTTTTCCTCAATCCAGATTTTATATCAAT CAATAACCCCATTAACCATGAACATTAATCAGTTCAGAGTACACAGCAAAATGAAATAAAAAAACTCAAGGGTTCTTCTT AATATGTAATAAAAACCCAGCAAATTCTTTGGCATTCATGAAGCTTTCCCTAACACCATTGCTATCAAAACCACATCTCC CAACCTTCAACCAACCCCCATAAAAAACGTAACCCCAACCCCATCAATGAAAACCCTTTTCCCCCAAATCTGGTGAGAAA CTCATAAATTTCTCAATATCATAACCCAGAAACAGTTTAATGGAAACACAGTAAACCCTAGGTGGAGAAGAAATCAGAGA GAAAATAGATTCAGCGCCTTCTTCCGCTCCAAATCGCGGTGCTAAAATCCCTCTTCGTCCCCTTACTGAAATCAACAATA AAAAAAAACACAATCAATCAATGAGATTCATCGAAATCGAAGACAAAACGACGATCGATTGCAAGAATGAGACACGAAAC GTACAAATCGGAGGATTCAGGTTGGTTCGCCATGGTGGGTGGGTGGGTGGTTCGCCATGGTGGGTGGGTGGGTGGTTGGG TTTCTCTGCGGAATGAATCTACCACCTTCACTCTTCTCCGCCTTCAACTACTCGAAGTGAAGAGGCCGTGGGAGTTCAGG CGCTGGAGCCAGAGATTGAACAGAGGCAAACTCAGCAGCGCTAGATCTTCGAACCAGGACTCTCCAGCGGCGTTGATTCC GTTCCAAAGAACTTGTTTGGAAGATCTAGGGGCAAAAATGTCGTTCACCGGCCAGCCAAACAGAGCGGGATCCGCCGACG AAGCTTTGGACAGGTCGTGAAGCTTTCGACTTTTGGGCATCAGAGGAAACTGAAATGAAATGGGTATGGGAATGTTGTCA GTCCTGGAATTGGAAATATACCCAAGCTTGGGTTTTTGGGTATGTGCTTGTGTGTGTTGAAAATTGGTACTTTCTTAGTT TTTAATTTTGCTGATCTCGTATGGTTTATTTTGATGGAGGATAAAGATTTGGGGAAGAAGATAGAGATTTGTTGAAGTGA TGTTGAAGAAGATGAGCAAAAAGATGAAGATTTGTTGTTGTTTGATTTTGGTCCCTCAGATCTGACTCTCTCTCTTTTGT TAATTAAATTTTTTATATAATTTAATTAATAATTGATTTTTTATTTTTTTAATCTATATTATTATATATTACATGAATGT CACGTGGATCACCCATGTGTCAACTTAAGTGACAGGTCACTTTTCCGTCCCAGGGACTAACGGTCAAACTTAGATAATGA CTATTATGACCGACGTCAACACTTACAGGAATTTTTTTAACCATTAATGATTTCAAGGGACTATTATGACCGGCGCCTTC ATTGTTAGGGACCAAAATGATGATTCACTCCTCACAAAAATGAGTTACAATTTGAAGAGAGTAATAAATACATCGTTAAT GGTGAATTGGAGAGGAACCCTAAGTAGTGAAATTGCAGAGTGGTGGTCGGCGTGAGTATGGATGGGGCGAAAGTAAGAGA GCTGAAGCAACTGGTGGAGGCATGCAAGTCAAATCCTTCACTTCTCCACAACCCTTCTCTTTCCTTCTTCAAGTCTTATC TTCTCAGGTCAGTTACAGTTACAGTGATTCTGTCTACTCATTCCGTTTTCTTCATTCCTTTCTCAATTCAATTCAATTCA ATTCTAATAACAATTCCATCTATCTATTTCTATTTCTATTTCTATTTCTATTGTAGCCTAGGTGCTCGCATCCCGATCCA ACCTAAAACGGTATGGCATTTCTTATTCTTACGCTACAATTTATCATTTCTCTTTTCAATTGATTCTAACTGTTAACGTG CAGGAGCCTACTGATTCTGATGATCAAAATGACTTTATAGAATCTGATTTAGAGTTGGATAATACTGATGTCCTACAACC ACAAGAACAAGATGAACCTCATAATTATAAGGTAATTATGTATGTTTAGTGAGTGTTGAAGGAAAGGAAAGGAAAGGGAA AGGGACTTCTAATTCAATTCAATGGCAGATGGGAATTCCTTCTGCTCAAGTAACAGTAACAGAGGAACAGAGGGATGCTG CACAACTTGCAAAATCAAAAGCACTCCATGCTATATCACAAGGTAACTTGGACCAAGCACTCGACCTGCTCACAGAAGCC ATTTTGTTGAATCCGCATTCAGCCATACTTTATGCCACCAGAGGTATACATATTGATATATCTCTATCTTCCACAACCAA ATCATAAAATCCAATTTATTTTCTGTGCCATTCCTTGGAAACCTCAATTTCTTGTTTTCAGCTATTGTCTTTCAGAAATT GAAGAAACCAAATGCTGCTATCCGTGATGCTGACACTGCCTTGGAGGTTCATTTATTCCTAACTTGTTGCATACAAAACA TGACATGGATCTATGAACTCAAATATATATTATTTGTTCCAGATTAATCCAGATTCAGCTAAAGGATACAAAGCACGAGG AATGTCAAGGGCCATGCTGGGGCTCTGGGAAGAAGCAGCCCGTGATCTTCGTGTGGCTTCAAACTTAGATTATGATGAAG AGGTTGGTATGTCACTTAAAAAGGTAATTTTCTGTTTTCTACATATTGAACATGCAAAATGAACCCTTGTCTTTTTGCCC CTTTAGTAATCATCTCTTTCTCTAGACAGGTCGAGCCAAATGCTCGCAAAATTGAGGAGCACAGGAGAAAATATGAACGC CTACGAAAGCAAAAGGGGCAGAAAAAGTCTCAACCTAAGAAGCAACAACAAGCTGAAGCCCAAGTAAGTATAGTGTATAG TTTCTTTCATCAAACCATCCTTGATAGTTAGGCTTTCCTAGGTGACATATTAAGGGTCAAAAATAATTTTAGTAGCAATC TGGATGCTATCATTAGTATCATAAGCTTTTCTCCATGTCTTAGTTGGAGCTCATTGCTTCTATGCAACGGAATTTCAGTA GAAGCTGATCACTTCATTTTAGTTTGGTAGTCTAGCCATGTTCTTCTCTTCTGATGCTTGGTTTTTACCTCGTACCATTA TCATTCAAGGTTAAAGCGAATTAATTTTCTCTGACTACTGTTCATACTAATGTTAAGATATAATATATGTATATATATGT CCAAACAATTCCTAATTTCACATGAGTTCATACTTGTGTTGTAGTTATTCAATTACGTTGTTTTGTCATGATGGGATGGG ACAAGGGTTGTGGGTCATAGCTGATAATGCAACATGTAGTGATTGCAAGTTGTTGGCTCCCTTTGTATGCACTTTAATAA CATTGCTATGAGATGATCCAATCATAGCTGAAACTTCTTTTGACCTTTTTGCAGGATCAAGAAGCATTATCTGCTTTAAA AGATGGTAAGTTTTTTGTATTTCAGTCACCCTAGTGGGTATTAAAATTCCCAAGTCATTTTGTTGAAATTCTGATCGTTG CTTAATACAAAATATAAAAACAGTTCTACATACCTCTTTGTCTGGTCCCACTGTTTATGTGGTTGTAAAGAAGTTATAGT ATGCATATTTTATCATAATTTCTCACCCACATTTACAACCTTAATAATTCATATGAAGTATATGGGCCTATTTAAAATCC TTTTTTGGACCATGCTTAGCATCATATTTTGATTTTAGACTTATATCTTAAAACTTATTCAAGATAATGACCAGTGCTAG AACTTCTGGTTTAGATATTCGGATATATGTTAATTTAATGACCACCAAATGCTTTATAAGTAATTTCTCAACAAAAATAA CATTGAGCTCAGACAATTCTTTCATAATTTTTTGACAATATATTGTCATTCATCAATTAAAATAACGTTAAGATGAAACT GTGAAAACACAGATAAAATTTAGGCATATTGGCTTGTTTCCTTTTGCTGTGTACGGCAAGCCATGTATATGGCTTGTATG ATTTGAAGACTAGGTTGCAAATTGGGCATAACTTTGTGGTGACAGCATGTGGAGAGGGATGACATTATATTGCTGAATTA GCTGTGAATTCATGTGCGTTAGCCAAATGTTCTTAACAAGATACAGAGAAACTATACTTTTGAGTTTCGAGTTTGCAATT CTCTATTTTATTATAACCCCTTCTCTTATTGACCTATTAAGTTAAAAGGTACTTTTGAGGTGTATATATATCCCTGCAGC CATTCCTCTGGAATATAAATTGAGACATGGTTACTACTATTATTATTATTATTATTATTATTATTATTATTATTATTATT ATTATTATTATTATTATTATTATTATTATTAAATGACCTATTACGTTTGTGGCATTTGAAAGGGCAAGTCATTAGTATTC ACTCTGGTGGTGAACTTGAAACAAAGTTGGGTGCTGCATCAAAAACATCTCGCTTGGCAATCCTGTACTTCACTGCAACA TGGTGTGGCCCTTGTCGCTTCATTTCGCCTATTTATACAAGCTTGGCTGAGAAGTACCCAAAAGTGGTTTTTTTAAAAGT TGACATAGATGAGGCAAGGGATGTTGCTGCACGTTGGAATATTAGCAGTGTTCCTTCCTTTTTCTTTGTGAAAAATGGCA AAGAGGTTGACAGTGCGGTGGGGGCAGACAAAAGCACACTTGAAAGGAAGATTATACAACATGCTGGCTCTCTTTAAGTC AATAATACCTTATAAGAACCCTGATACAATTGTATTTCTTTGCCATTTCTTTTGCTTACACATCTTTGGTGTCGTCCAGA GGCAAAGACCAGTATGAGAGTTCCAATGTATTATGATTTGATGTCTAATGCTTGTGTGTAGATAATGTTAATGTTGATTT GTAATATCTTTCAAATTTTCATGCTGATTTTAGGTTCATGGTTACAGAAACGGGAACGAAAGTAACATAGGACAAGGTTG CTTATTTGGAAACTTATGGATGGGTCACTCACTTGATATTTTTTGTTATTTATCATTTTGAAGTTAGGTCATGTTCTTCT GAAAGTTATAGACGGGTCAGTTTCACTTATTCTTTATTTATTTATCATTTTGTGACTTGCGGATGCAAGAAATGTTGTGG TCTGATCTAGCTTACCCGCAGTAGCATGTTCACTTATGAAGTACTTTTGGTTCATCTTAGAGCAATTAACCATGGTAACT GCATAGATGTAGGAGTTGCTATTCGCTATTTCAATGTAGAAAAGCAGAAAATTGGTAAACTTCTTTAACATGAAATGATA GTAATAGTACAAGAAATGACGTGATCGTTGTGACACTTGAAGCTTTTGAAAACTAACAAGTCATCCAAAGAAAAGGGTTG TAAATGGTTCATTTTCTCTCAATTTTGGAATAAAATCTCAAAACCAAGTAGAAGAAGAACCTGTAAAGAACTCCCCAAGC TAGCAGAATTAAGATGTCATACCAAATGTGTTCCATGGTGATATCCATGGTGGACAAGACATCTTCTCCTAATAAGCAGT TAGGGGGCAGAGTAGCGTTATGATGTTTGCTGGGCTTCACATCTCCTAATGGTCCAGGTGATAATTCTATTTTGCTTCCT ATGTAGCAGCCGCGGTCGTTCTTGAATTCATTTATCAGTAACGCCTCAAATGGGTATTTGATTGCAGAAATATAGTGGAG CCACTTCCAGTAAATGGGTATCTGAGTTTGCTTGAGGAAGAAACCACAGGTCAAAAAGAAGAGTGCGGTTGTGGCAATGA CAACTGCATACCCTGTGATGTAACTCGGCACAAGTGCACTAACAAGCATCACATATGCATTGGTAGTGATGAGGGAGGCA TAAAGTATTATCCAGAAATTGAAGAGACTACTTTTCAAGTGGAGCATTACTTTGGTTATGGCAGCAAAGGTGAGCCCTTG AACTGCGAAAAATGGGAGGTAAACAATGAGGGAAGAAATGACATATGAAGAAGCACGGTAAGCATTGTGTGAAGTCTCCC TGATGAAGATGAACCTTTCCATGATAAAAGATGGGACTGCATCATTGGAAGAAAAGAAAACAAGGCATACTGCAAAGATG TAGAAATTAAGGAGCTTATTGATGTCTTTGAAACTTAGATCACTCAGATTCCCGAAAATGGTGGACAAGATAAGTGCCAT GACAGTTAGCACAATCTCACGGGAGAGGAAGAGTTCTGGGGTGCGCATTACATTGAGTAATGTTCGCCACGAGAGCACTG CAATCTCACGCCACCATGGGTTTGCATACTTGTGACCATGGATTGGCTCATCAAGCACTTCCTCAATCTCAAACTCTTCA TATGAAGGTTCATATGAACTGGCAGAGTAGTCTAGTGGCTGGTTAACCACTGCAGGAGTTTTGGGGTGATTAGGATCCTG ATAAGCTGCAGAATTTTGGTTGGAAATGAAACTTCTTGGTCCTGACATGGGTGTTTTTGCAGGTGTCCATCCTGGAGTTC TTGCTGGAGTCCATGATGGTTGGCGACGGGGGGTTCCTACTACACCATTGTAAAGCCAAACAGAGAAATCTTTTGCTGAG AAATCTTGGTAGAACTGAGAAGCCAAACGTGGGTAAACACCACTAGTCATAGCCTTCCTTGGTGTATGAGCACTTCTCCT TTCAAGGGAGTTATCAAAGTTCTCATCATCCTCCTCCTCCTCCTCATCATGATAACCAAACTGTGCCGAATCAGGTTGTG GTGTTCCAGCAGTAAATCCTTGGCTACGTAGGCTAATCATGTGTTTAGATGCAGGGGTGTTTCTTCTATATGGTGTAGTT TTTCGAACAGGAGTCATAGCTGCTGGGTCAGGTTTGTGGCCATCAAGCTGGTATTGGACAAGGGGGTCAAGCCCAACTGT TGCTTGATCATATTCAGTTATGACATCTAGGAGATACTCAATACTGTTTTCTCCATCAGGCACAGGCCTTCCAAATCCGG AAAGATGAGACTGAAGTGCATCTGGCTTTCCCATGTATATCAGTCTTCCCCTATAAAACCAATAAATAGAGTAGCAAATT TGGTCATGATGAATATAATTTTCGATTACAAGTAAATTGAGCCTACAATCTCTACCAAAATCCTATCCATCTTCCATTTG AGTTTAAAAAGTACATGCATAAAACCAAATTACTTGATATAAACTATGAAGTAATAGAGTCCC
CDS sequence (LotjaGi4g1v0465200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATGGGGCGAAAGTAAGAGAGCTGAAGCAACTGGTGGAGGCATGCAAGTCAAATCCTTCACTTCTCCACAACCCTTC TCTTTCCTTCTTCAAGTCTTATCTTCTCAGCCTAGGTGCTCGCATCCCGATCCAACCTAAAACGGAGCCTACTGATTCTG ATGATCAAAATGACTTTATAGAATCTGATTTAGAGTTGGATAATACTGATGTCCTACAACCACAAGAACAAGATGAACCT CATAATTATAAGATGGGAATTCCTTCTGCTCAAGTAACAGTAACAGAGGAACAGAGGGATGCTGCACAACTTGCAAAATC AAAAGCACTCCATGCTATATCACAAGGTAACTTGGACCAAGCACTCGACCTGCTCACAGAAGCCATTTTGTTGAATCCGC ATTCAGCCATACTTTATGCCACCAGAGCTATTGTCTTTCAGAAATTGAAGAAACCAAATGCTGCTATCCGTGATGCTGAC ACTGCCTTGGAGATTAATCCAGATTCAGCTAAAGGATACAAAGCACGAGGAATGTCAAGGGCCATGCTGGGGCTCTGGGA AGAAGCAGCCCGTGATCTTCGTGTGGCTTCAAACTTAGATTATGATGAAGAGGTTGGTATGTCACTTAAAAAGGTCGAGC CAAATGCTCGCAAAATTGAGGAGCACAGGAGAAAATATGAACGCCTACGAAAGCAAAAGGGGCAGAAAAAGTCTCAACCT AAGAAGCAACAACAAGCTGAAGCCCAAGATCAAGAAGCATTATCTGCTTTAAAAGATGGGCAAGTCATTAGTATTCACTC TGGTGGTGAACTTGAAACAAAGTTGGGTGCTGCATCAAAAACATCTCGCTTGGCAATCCTGTACTTCACTGCAACATGGT GTGGCCCTTGTCGCTTCATTTCGCCTATTTATACAAGCTTGGCTGAGAAGTACCCAAAAGTGGTTTTTTTAAAAGTTGAC ATAGATGAGGCAAGGGATGTTGCTGCACGTTGGAATATTAGCAGTGTTCCTTCCTTTTTCTTTGTGAAAAATGGCAAAGA GGTTGACAGTGCGGTGGGGGCAGACAAAAGCACACTTGAAAGGAAGATTATACAACATGCTGGCTCTCTTTAA
Protein sequence (LotjaGi4g1v0465200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDGAKVRELKQLVEACKSNPSLLHNPSLSFFKSYLLSLGARIPIQPKTEPTDSDDQNDFIESDLELDNTDVLQPQEQDEP HNYKMGIPSAQVTVTEEQRDAAQLAKSKALHAISQGNLDQALDLLTEAILLNPHSAILYATRAIVFQKLKKPNAAIRDAD TALEINPDSAKGYKARGMSRAMLGLWEEAARDLRVASNLDYDEEVGMSLKKVEPNARKIEEHRRKYERLRKQKGQKKSQP KKQQQAEAQDQEALSALKDGQVISIHSGGELETKLGAASKTSRLAILYFTATWCGPCRFISPIYTSLAEKYPKVVFLKVD IDEARDVAARWNISSVPSFFFVKNGKEVDSAVGADKSTLERKIIQHAGSL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 368 | 368 | 7.5E-180 | – | |
| PANTHER | 1 | 368 | 368 | 7.5E-180 | – | |
| Pfam | 2 | 43 | 42 | 2.6E-18 | ||
| CDD | 4 | 43 | 40 | 1.36542E-16 | ||
| Gene3D | 59 | 236 | 178 | 3.0E-50 | ||
| SUPERFAMILY | 96 | 203 | 108 | 1.43E-22 | ||
| ProSiteProfiles | 102 | 203 | 102 | 17.817 | ||
| SMART | 102 | 135 | 34 | 2.2 | ||
| SMART | 136 | 169 | 34 | 0.0081 | ||
| SMART | 170 | 203 | 34 | 100.0 | ||
| Coils | 219 | 239 | 21 | - | – | |
| MobiDBLite | 227 | 249 | 23 | - | – | |
| SUPERFAMILY | 229 | 367 | 139 | 2.73E-32 | ||
| Gene3D | 237 | 368 | 132 | 1.0E-34 | ||
| ProSiteProfiles | 242 | 368 | 127 | 12.879 | ||
| Pfam | 280 | 363 | 84 | 3.0E-23 | ||
| CDD | 280 | 363 | 84 | 6.80308E-35 | – | |
| ProSitePatterns | 286 | 304 | 19 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Cell redox homeostasis | Any process that maintains the redox environment of a cell or compartment within a cell. | ||
| Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of LotjaGi4g1v0465200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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